Basic Information

Gene Symbol
-
Assembly
GCA_018231745.1
Location
DVQP01000045.1:13850-15206[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.4e-09 6.9e-06 26.8 1.9 4 43 8 63 7 66 0.94
2 2 9.5 1.2e+04 -2.8 0.1 17 29 173 185 165 190 0.61

Sequence Information

Coding Sequence
ATGCCATTGAACGCTATAGGATGGACAACTGAAGAAGACGAAAAACTAATTGAATTAGTGCAACCCCACGGACATTTGTATTGCTGGTTGGATCCCTCgcgaaaaaatatactaactcGTGAGAGAACCTGGCAAGAAATTGCTAcggaaattttaaaaccagTTGAGGAATGTAAGAAGCGCTGGAGGGGTCTCCGTGATGGATACACAAGAAACAAGCGCATGGGATCAATACATAAATCTAAATTACCCATATTTGAAAAACTGAAATTTTTGGACGGTATGCCCCTTGATACTCTGCAAATAGAAAACAACACATTGGAAACAAGAGAAATATTTGACGAGGATACCTCGGAGAGTCAAATGTTAGAAGAGCAAGTAGCCGCCGAGCAACAGGTCATAACAGATAACCAGGAATATTATGAAATAACCCTCGTTGATAATCCTATGCAAGAAACGGATACTAAGccacaaattataaaaattgttccaaagaaaattaaactagAAGGAAATAACCAAATTGGCGAACcaccaaaaaaaattggtagAAAGAATGCTGGCAGGAAAAAGTCAGTGCCAATTCCAAGAAATATTCcacctattaaaattttaccaaaacCAATTGTAATGAATGAACCTaggataataaaatgtgttgaGGATCCAAAAACACCGGAGCAAAGATCGCAAGTCATTGATAAACTTattgagaaaatattgaaagagaatacaaatgaaatagatGTTTTCTTCAGAAGTATGGCGGCTAGTGTTAAGAAACTACAACCAAATTTAATTCCAAAAGTGAAAATGGAAGTGTGTAATGTAATAGCAAAATATGAAATGCAGAGTTTCGATAAGAACATGCAGAATAGTTAA
Protein Sequence
MPLNAIGWTTEEDEKLIELVQPHGHLYCWLDPSRKNILTRERTWQEIATEILKPVEECKKRWRGLRDGYTRNKRMGSIHKSKLPIFEKLKFLDGMPLDTLQIENNTLETREIFDEDTSESQMLEEQVAAEQQVITDNQEYYEITLVDNPMQETDTKPQIIKIVPKKIKLEGNNQIGEPPKKIGRKNAGRKKSVPIPRNIPPIKILPKPIVMNEPRIIKCVEDPKTPEQRSQVIDKLIEKILKENTNEIDVFFRSMAASVKKLQPNLIPKVKMEVCNVIAKYEMQSFDKNMQNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00824695;
90% Identity
iTF_00421296;
80% Identity
-