Basic Information

Gene Symbol
-
Assembly
GCA_018231745.1
Location
DVQP01018276.1:250-2448[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 4.4 5.6e+03 -1.7 0.0 22 37 226 242 224 249 0.78
2 5 2.8e-07 0.00036 21.3 0.1 1 45 257 303 257 304 0.94
3 5 2.2e-09 2.8e-06 28.0 0.2 2 44 311 357 310 359 0.94
4 5 5.1e-12 6.5e-09 36.5 0.0 1 43 363 405 363 407 0.97
5 5 0.00035 0.45 11.4 0.0 4 45 416 459 414 460 0.92

Sequence Information

Coding Sequence
atgtatGGATTTCAAATGGATACCGACAGTGATGAAGATAATGAAATTCAAGACTTGGAACAATTAAATGCAGTATTAATCGACGATGGACCTCCTAGTGCATCAGCTTCTCATTGCTCAATGTCATACAGTGTCTGTACAGTGGACTATGAAGAATATTCGAAAATAGAGGCTGCATTGtctcttaataaaatgtgtgaTGATAAATTGAAGAGATTAGaaaaaatactacaaaatCGCCTCCGTGAGTGCTGGGAGAAGCTTAATGGAATGAAAAACATAGACAAAGATCTATCTGACCGACAGGACAGACAAGAGGTGTTCCGTTATGTTAATTGTGGTAAACCATACTTTAAAGATAGATGCTTCTTCCCAGCTCCTGATAATGAGGATACATTATTAATGGTGAAGTCTGGAATGtatgatttttcaaatatagctTCTATTGCTGGTTGGACTGTTAAAGACAAAagtcaatttttaattgtattgcaAAAACTGTCACAAACACTTAAAAAGAATGAGATAAAATCGAAAATAGCAGAGCTAAAACGTGAAAGTAAAGttaatgaaacaaagaaaaactgCAGAATGATTACTGCTTTGAACAGAGAAATGGATAGAATCAATAAAATGGCATTAAAGGATCTAGCTTTACCCATCGATCAAGAATATGATTGGGATTTTGTTGCTAATAAGTTGAATTTCAGACACAGTGCACAGGAATATCGATCACTTTGGAAGTTGTTTCTCCATCCAAGTATCAATAAGAATTCATGGAATAAGACTGAGCACACATTACTACAAAGAATAGTACTAGAAGAGAATCTTGTAAATTGGGACACAATAGCATTAAAATTAGGCACTAGACGCACTAGTTATCAATGCTTTGTATATTTCAGGACAAACATGAGTAATACATTCACAGGTATGAAATGGACTAAGGAGGAAGAGGAATATCTTAAAAGGCTAATCGATTACTACAAACAAGATAACTACATCCCTTGGGGTAAAGTTGCAGCATCTATGGAGAATAGGACTaagattcaaatttataataaatttttacgatTAGAGGAACATAGAAAAGGAAGGTTTATGCCAGAGGAAGATGCTGTTATATTGACAGGCGTTGATAGTTTTGGGCAAGACTATAAAAGAATCTCAAAATATCTTCCGGGTAGATCCGCAGCTCAGTGCAGAGTTAGGTATCAAGTGTTAGCTAAGAAGCGAATTTCAGCTGTTTGGACAGTGGACGAGGATAGAAAACTAGTGCAATTAATGGCAAATCAAGattcaaacattaattattccaCTTTAGTTCCCTATTTCCAAGGAAAAGATAGGTTTCATTTGAGATCAAGATATTTGACCTTGACAAAGTGGATGCGACGGCACCCCAATCTGGATATAGCCCTAGCACCCAGACGAGGGGCTCGACGATTAGGTCACGGCCAATCATCTGATGACCTGAATTCAGCCattgaaagtttaaaaacgAAGATTCAATCAGAACTCACAGACaataagaagaagaagataaCCAAAGATTCCCCCGAAAGTGTTATTGAAGATGCAATTATTGCTACGCTTGTTACGGAAAATGCGAGGTTAGAAGAAGCTAGGAAAGGACAGACATCTAACGATACGCAGAATGGTATggaacaaagaaataaaacgagCAATGCCTGCAATCTATCTAGTTTGCAGaaagttttaattctattacgCTCAAAgctaaacaaaaagaaatttattcagAATTGCGATCCGAAGTATAAAGGTTTGATTGAGCCAGAAAATGACATTTATTCTGTTAGAGTTAAATCTTATTCTAAGGAGAATATAAAGAAGAATAATGTTCATGTTAATTCTAAACCCGATATTTGGGGCGAAGTTTGTCTTGGTCCTCTGGAACACGTGTTTCCACCCCATTACGCGACTATAACTGGTTGCAGAAAATTAATGTCCTATGTAAGCAGCAAACCCAACAAGGATGACACATTTAACTTACAAACGTTATTACGAAAAAACGTACTTCTCAAAGAACAAGTGCTTTTATTAATGGAACGTTTCAATGCTTTATTTCTTTGGCCCCTACTTCTATCCAACTCTCCTCCAGAGCCTTTTACATCAATAGAAAATGATAAGTCCCTAATAGACaaagacattaaaatctttaaggacgataaaaattag
Protein Sequence
MYGFQMDTDSDEDNEIQDLEQLNAVLIDDGPPSASASHCSMSYSVCTVDYEEYSKIEAALSLNKMCDDKLKRLEKILQNRLRECWEKLNGMKNIDKDLSDRQDRQEVFRYVNCGKPYFKDRCFFPAPDNEDTLLMVKSGMYDFSNIASIAGWTVKDKSQFLIVLQKLSQTLKKNEIKSKIAELKRESKVNETKKNCRMITALNREMDRINKMALKDLALPIDQEYDWDFVANKLNFRHSAQEYRSLWKLFLHPSINKNSWNKTEHTLLQRIVLEENLVNWDTIALKLGTRRTSYQCFVYFRTNMSNTFTGMKWTKEEEEYLKRLIDYYKQDNYIPWGKVAASMENRTKIQIYNKFLRLEEHRKGRFMPEEDAVILTGVDSFGQDYKRISKYLPGRSAAQCRVRYQVLAKKRISAVWTVDEDRKLVQLMANQDSNINYSTLVPYFQGKDRFHLRSRYLTLTKWMRRHPNLDIALAPRRGARRLGHGQSSDDLNSAIESLKTKIQSELTDNKKKKITKDSPESVIEDAIIATLVTENARLEEARKGQTSNDTQNGMEQRNKTSNACNLSSLQKVLILLRSKLNKKKFIQNCDPKYKGLIEPENDIYSVRVKSYSKENIKKNNVHVNSKPDIWGEVCLGPLEHVFPPHYATITGCRKLMSYVSSKPNKDDTFNLQTLLRKNVLLKEQVLLLMERFNALFLWPLLLSNSPPEPFTSIENDKSLIDKDIKIFKDDKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00420493;
90% Identity
iTF_00420493;
80% Identity
-