Basic Information

Gene Symbol
cnc
Assembly
GCA_018231745.1
Location
DVQP01020447.1:1-2040[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.7 5.2e+03 -1.8 0.0 19 36 17 34 15 50 0.67
2 2 4.8e-14 6.8e-11 42.7 6.9 3 64 60 121 58 127 0.93

Sequence Information

Coding Sequence
CGCCGCCTGACCGACGGCAGCACTTCCGACAGTGGCAGCGGACACCTCAGTAGAGACGAGAAGCGGGCGAAGGCTTTAGgcaTACCGCTGGAGGTGCAGGACATCATCAATCTGCCAATGGACGAGTTCAACGAGCGACTCTCCAAGCACGATCTCAGCGAGGCGCAACTCTCGCTCATCAGAGACATACGGAGGCGGGGCAAGAACAAGGTGGCAGCACAGAACTGCCGGAAACGGAAGCTGGACCAGATCACCTCCCTGGCAGACGAGGTCCGCACGGTCCGCGACAGGAAGGCCCGCACACAGAGGGACAGACACAACTTGCTGGCCGACCGGCAGAAGCTCAAGGAGAGGTTCGCCGCGCTCTACAGACACGTGTTCCAGCACCTCCGCGACCCTGAAGGTCGACCCTTGTCCTCCAGCCAATACTCCCTACAACAAGCTGCTGATGGCAGCGTAGTGCTCGTACCCAGGATGGGAGGAGACCACGCCATGAACCGGACGGAGGAAGACGTCGAGCGGAAGAACAACTACGAGCACTAG
Protein Sequence
RRLTDGSTSDSGSGHLSRDEKRAKALGIPLEVQDIINLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKARTQRDRHNLLADRQKLKERFAALYRHVFQHLRDPEGRPLSSSQYSLQQAADGSVVLVPRMGGDHAMNRTEEDVERKNNYEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00682119;
90% Identity
-
80% Identity
-