Basic Information

Insect: Danaus chrysippus
Gene Symbol: B0310.2
Assembly: GCA_004959915.1
Location: RPCZ01000066.1:996398-1010290[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0033 0.24 12.2 1.0 1 23 396 419 396 419 0.98

2 7 0.0014 0.1 13.3 0.7 1 23 423 446 423 446 0.96

3 7 0.098 7.1 7.5 0.4 2 23 521 543 520 543 0.96

4 7 0.0033 0.24 12.1 0.3 3 20 560 577 559 580 0.93

5 7 4.3e-06 0.00031 21.2 2.5 1 23 586 608 586 608 0.99

6 7 0.00018 0.013 16.1 2.8 1 23 615 637 615 637 0.98

7 7 5e-05 0.0037 17.9 1.1 1 23 643 666 643 666 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0033	0.24	12.2	1.0	1	23	396	419	396	419	0.98
2	7	0.0014	0.1	13.3	0.7	1	23	423	446	423	446	0.96
3	7	0.098	7.1	7.5	0.4	2	23	521	543	520	543	0.96
4	7	0.0033	0.24	12.1	0.3	3	20	560	577	559	580	0.93
5	7	4.3e-06	0.00031	21.2	2.5	1	23	586	608	586	608	0.99
6	7	0.00018	0.013	16.1	2.8	1	23	615	637	615	637	0.98
7	7	5e-05	0.0037	17.9	1.1	1	23	643	666	643	666	0.92

Sequence Information

Coding Sequence: atgaagTGTTGTGTTAAAAATTGTTCAAATGATAATCGGAAAGCAACAAAGAACGACGGTATCACCTTTCATCCATTCCCTAAAGAGGAAATCCTCCACACCGCATGGATAGATGCTCTCGGTATGACAGAATGGGACACAAAAGATCCAagtatGATATGTTCCGAACATTTTACTGAAGATTCATTTTACTTCACAAAATCTGGTGTAAAGAAAGTTAAAGCCGAAGCAGTGCCTTCACCGATActtATAACATCCGATGAATTAGACTCAGCAGCGGATAATAGGGTATGCAGAATATGTCTATCAATAGATGTCAAAATGTTTGACATAGCAGAAGGTGGAGTCAGTACTATGATTGAGAGGATCACGAGCATACATatCAGTCCACTCGATAAATTACCTAATCGTGTATGCTGGGAGTGTATCGCTCGGTTGAAGAACGCGGACAGCTTCAGGGATAAAGCTATCAGATGTAATGAATTACTCAACAAACTGGATTTGGATAGAACTATAACAATAAGAGAtgtaaaatcaataaacaGGACAAACAAGAAATTGAAAACTACCCTCgtacagaaaatatatgacaCAAACGAATAcgattatgaaattaatgatGACGTTAAAACGGAGAATAATGACACggattttaatgattataatgataatgacattaatgatattaatgacATCAAGAACGAACCGGAAATAAAAGATGAGAGCAACAATGAGATATTCTTCGAGGAATATCCGGTTTTAAATGACAGTGATGAAATTACATTGAGCGAGGTTTGTAAGAAGAAGAAAGTAAGGAAGAAGAAAGTTAAAATTGAGAAGAGAAAAGAAGTTAAGATTAAGAAGAACGATGAAAACGACAGCCCGTCGATTACTATGGATAAGTACAAAAAATCCGATGTCAAGCGTCGCAAAACCGATAATCTGGACGAATCTTTATTCACAATAACGACCCTGACTTACGACGAACAGATAGCTGAGATTGAGAAGCGGCAAGAATCAGCTTCATACAGACACTCGCCTTATAAATGTGTGACGTGTTACAGAGGATTCCTTATTAGGGACAGATATGAAGCACATGTTGTGAGGCATAGCGAGGTTGGTATGAACGGAATAACTATTCGGGGTGTAGCTCGCGAACACGAGAAATGGCACGCGGGCACAAAGTACCAATGTCCACACTGTCCAAGCGAGTTTGATAAACTAACCACCTACATGGGTCATATTCGTATAAAGCACGTGTCTGACTTCGTGTGTGAATTGTGTGGGTACACGTTTGTCAGCAAGAAGGGGGTAGACGTGCATAAGAAGAAAAAACATAGAGttgttgataaaaatATGGAATTGTCGGGTCCTTTCTGTGAGGTGTGTGACGTACGATTCCTTTCTGAAGAAGCTCACTCCAGACATCTGAAGCTATCATCTAAACATAGCAGCGATAATGACCcTAATCGTATTCGTAACGACTCTCAAAGTATGAGCACTGAAAGAGGTCTCGCTAGAAGGAGGGATGTACGAGAAACGGGAGACGCTTCACCCGTAACGTGCGAAcagTGCGGTCTACAGTTACGTGATCTACGTCTGTACGCACAACACTTCCGTCGCTCACACCCGGATAAGAACAGAACTAAATACCCGGCTATGAAGACGCCCGCCATGTGCGAACACTGCGGACGGATATTCCAGAGTATGGCGTTATTAAAAGATCATATGTGGGTCCATACTGGAGAGAAGAGGTTCAAGTGTGACAGATGTGACAAAAGCTTCACGCAGAAGACGAATCTAGTGTTTCATATGAGGGTACACTCCGCTACTAGACCGACCTACGAATGTCCGCTGTGTGGGAAACACTTCGCGTTCTTCAATAATAGGAGGCGgcatatgtttATTCACACCGGCCTGAAGCCATTCAAGTGTGACACATGTGGTAAGAGTTTCACTACAGCCGGTGAACAGCGAGCACATACAGATCATGTACACCTCAAGAAACCCTGGCCGAAGAGGGCTAGGAGTGGACAGTGGAAGTGTGTTGAGGATTAG
Protein Sequence: MKCCVKNCSNDNRKATKNDGITFHPFPKEEILHTAWIDALGMTEWDTKDPSMICSEHFTEDSFYFTKSGVKKVKAEAVPSPILITSDELDSAADNRVCRICLSIDVKMFDIAEGGVSTMIERITSIHISPLDKLPNRVCWECIARLKNADSFRDKAIRCNELLNKLDLDRTITIRDVKSINRTNKKLKTTLVQKIYDTNEYDYEINDDVKTENNDTDFNDYNDNDINDINDIKNEPEIKDESNNEIFFEEYPVLNDSDEITLSEVCKKKKVRKKKVKIEKRKEVKIKKNDENDSPSITMDKYKKSDVKRRKTDNLDESLFTITTLTYDEQIAEIEKRQESASYRHSPYKCVTCYRGFLIRDRYEAHVVRHSEVGMNGITIRGVAREHEKWHAGTKYQCPHCPSEFDKLTTYMGHIRIKHVSDFVCELCGYTFVSKKGVDVHKKKKHRVVDKNMELSGPFCEVCDVRFLSEEAHSRHLKLSSKHSSDNDPNRIRNDSQSMSTERGLARRRDVRETGDASPVTCEQCGLQLRDLRLYAQHFRRSHPDKNRTKYPAMKTPAMCEHCGRIFQSMALLKDHMWVHTGEKRFKCDRCDKSFTQKTNLVFHMRVHSATRPTYECPLCGKHFAFFNNRRRHMFIHTGLKPFKCDTCGKSFTTAGEQRAHTDHVHLKKPWPKRARSGQWKCVED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00421427;
90% Identity: iTF_00419044;
80% Identity: iTF_00419044;