Basic Information

Insect: Danaus chrysippus
Gene Symbol: -
Assembly: GCA_004959915.1
Location: RPCZ01000066.1:1253776-1265699[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.086 6.2 7.7 1.4 1 23 269 292 269 292 0.94

2 8 8.2e-05 0.0059 17.2 0.3 1 23 298 320 298 320 0.99

3 8 0.0098 0.71 10.7 3.7 1 23 324 346 324 346 0.98

4 8 6.9e-06 0.0005 20.6 0.9 2 23 383 405 382 405 0.96

5 8 3.5e-05 0.0025 18.3 1.9 1 23 411 433 411 433 0.98

6 8 0.00047 0.034 14.8 3.4 1 23 454 477 454 477 0.94

7 8 5.1e-06 0.00037 21.0 2.3 1 23 482 505 482 505 0.98

8 8 0.13 9.3 7.1 0.1 3 11 514 522 513 527 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.086	6.2	7.7	1.4	1	23	269	292	269	292	0.94
2	8	8.2e-05	0.0059	17.2	0.3	1	23	298	320	298	320	0.99
3	8	0.0098	0.71	10.7	3.7	1	23	324	346	324	346	0.98
4	8	6.9e-06	0.0005	20.6	0.9	2	23	383	405	382	405	0.96
5	8	3.5e-05	0.0025	18.3	1.9	1	23	411	433	411	433	0.98
6	8	0.00047	0.034	14.8	3.4	1	23	454	477	454	477	0.94
7	8	5.1e-06	0.00037	21.0	2.3	1	23	482	505	482	505	0.98
8	8	0.13	9.3	7.1	0.1	3	11	514	522	513	527	0.87

Sequence Information

Coding Sequence: atggaaataaaggaaggtattcttaataatttattgtgtatGTCATGTCTGTGTGTTGGGCGATGTATCCAAGAGGTTAAGGAAGAAAGATTAAAGCAGTATTACTTAGATGTTCTCAGAGAAATACCTCTAAATGTAGACCTACCATCACCATGGCTCTGCTGGGAATGTGTGTCTTTGTTACAAAAAGTGGTGGCATTCAGAGATCAAGTGAAAGACTCGTATAGAATACTACAAACATATACTAAAGATAATTTCAATGAATGCCTGCAAAGCGATGTGTCTAGATCTCCACGGTTGAAATTAGCGAAACaattatgtattgatataCCACCTGAAGATGTgaagtttgaaattaatgaagGTGAATCGAGTCCTCGGAATAAGAGTTTTAATATCGACTCAGAACATGAACTTGAAGAAGTTCACACGGTGATTTGTGATGTACAGAGAGGGCAAGGGAagATTTCAAACAACGGCAGTTTGTTCCTGAACGAAAATGATCCGATGTGTACCCAACACGACGTTAAGAATGAACCGTGCGATGatATATTTACTGACAGAATGAAAATAGAAGACGTTGTTGAGTTAAAATTGACGCCCAAGAGAGAGAGAAGGAAGttaaataataaaataaagaaaccgGATGAAAAAGAAGATTACTACGAGAACGGAAGAAACGAAATTGTTGAGgATACTAagtgtattaaaaatcaatactacAAAACTCTCCATCTCTCCTACGAGGAGATGCTGGCGGAGAGACAGGCTCTCCGTGGCGCGGAGAGTTTCGTGAACTCTCCGTATAAATGCGAGTCTTGTATTATAGTTTTCAACCACCAGAGGGCGCTGAAGATTCACAACGAAAAGAGGCATACAgtCGCAGGTAAATATACCTGTTCCATTTGCAACATTAACTTATCATCATCTGAAGAATTGGCGTCACACTACAGGCGCCACACGAGGACGTATGAGTGTACAGTCTGCAACAAAAGGTGTGCCTCTATCAAAGATGTACATAAACACTTGAAGGAAcacagtatatatataaaagtgtatACTTGTGATGTCTGTGCTGTCGTTTCTAATTCAGCGGCGACGCACAGATACCATAAAGAGAAGCATCACTCAAACAAACCGAGGATTGAATGCGCCGATTGTGATAAAACTTTTAGTCATCGAGCGGGGTTAATGAACCACAGACTGACCTTCCACGAGTACCAGAACAAGTTCCCTTGTAACGTGTGCAACAAAATATTCAGATGGAAGACGAGCTTGAAGCGGCATCTCAAGAAACATAATGAGtCCAAGGATAACCGCAGTAAAGCGTTCTGTGCTAAATGCGACATCGTGTTCTCGTTCATCTGTGACCACTGCAACCATAGGTTCGCTGACAAAACGAAATTAAGAGATCATATTGAGGAGAAGCATTTATTCAGGACTTACCAGTGTCATATATGTCATAAGCCGTCCAAGAACAGGGTCGGTCTAGAACAGCACATACGAACAGTACACAAAGGAAGACCGAATAATAGAATGTGTCACCACTGTGGGAAAGGATTCCCTGTACATCTCAACATAAAATCGAAGAGATACCCGCTGTGCAGGAAACGGAAGGAGAACAACCAACCGGATGTAGCCGTGTTCACACTTCCGGTACACTACATGCCTGATAACggatatactatataa
Protein Sequence: MEIKEGILNNLLCMSCLCVGRCIQEVKEERLKQYYLDVLREIPLNVDLPSPWLCWECVSLLQKVVAFRDQVKDSYRILQTYTKDNFNECLQSDVSRSPRLKLAKQLCIDIPPEDVKFEINEGESSPRNKSFNIDSEHELEEVHTVICDVQRGQGKISNNGSLFLNENDPMCTQHDVKNEPCDDIFTDRMKIEDVVELKLTPKRERRKLNNKIKKPDEKEDYYENGRNEIVEDTKCIKNQYYKTLHLSYEEMLAERQALRGAESFVNSPYKCESCIIVFNHQRALKIHNEKRHTVAGKYTCSICNINLSSSEELASHYRRHTRTYECTVCNKRCASIKDVHKHLKEHSIYIKVYTCDVCAVVSNSAATHRYHKEKHHSNKPRIECADCDKTFSHRAGLMNHRLTFHEYQNKFPCNVCNKIFRWKTSLKRHLKKHNESKDNRSKAFCAKCDIVFSFICDHCNHRFADKTKLRDHIEEKHLFRTYQCHICHKPSKNRVGLEQHIRTVHKGRPNNRMCHHCGKGFPVHLNIKSKRYPLCRKRKENNQPDVAVFTLPVHYMPDNGYTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00421632;
90% Identity: -
80% Identity: -