Basic Information

Insect: Danaus chrysippus
Gene Symbol: -
Assembly: GCA_004959915.1
Location: RPCZ01000016.1:1637412-1640970[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.012 0.87 10.4 0.3 1 21 24 44 24 45 0.94

2 29 0.34 25 5.8 1.0 3 23 71 92 69 92 0.95

3 29 0.19 14 6.6 0.4 2 23 113 135 112 135 0.93

4 29 0.3 22 6.0 2.0 1 19 158 176 158 179 0.95

5 29 0.0017 0.12 13.1 2.1 1 23 268 291 268 291 0.94

6 29 0.098 7.1 7.5 0.0 2 23 319 341 318 341 0.94

7 29 0.013 0.95 10.2 0.4 1 23 363 386 363 386 0.95

8 29 6.2e-05 0.0045 17.6 0.8 3 23 393 414 392 414 0.96

9 29 0.00011 0.0083 16.7 1.3 1 23 419 442 419 442 0.95

10 29 0.012 0.89 10.3 0.1 2 23 448 470 447 470 0.90

11 29 0.0036 0.26 12.0 6.7 1 23 474 497 474 497 0.97

12 29 0.0064 0.47 11.2 0.2 2 23 504 525 503 525 0.96

13 29 0.05 3.6 8.4 0.3 1 20 531 550 531 552 0.87

14 29 6.2e-05 0.0045 17.6 2.5 1 23 596 618 596 618 0.96

15 29 0.21 15 6.4 0.0 2 23 646 668 645 668 0.90

16 29 7.5e-05 0.0055 17.3 1.4 2 23 689 711 688 711 0.95

17 29 0.00025 0.018 15.6 0.5 1 23 716 739 716 739 0.96

18 29 0.004 0.29 11.9 0.3 1 23 744 767 744 767 0.97

19 29 0.00053 0.038 14.6 0.4 2 23 770 792 770 792 0.96

20 29 1.3 94 4.0 2.3 3 22 801 820 800 820 0.95

21 29 0.0096 0.7 10.7 0.5 1 23 872 895 872 895 0.93

22 29 0.017 1.2 9.9 0.2 2 23 923 945 922 945 0.94

23 29 0.033 2.4 9.0 0.0 2 23 967 989 966 989 0.95

24 29 1.5e-05 0.0011 19.5 0.3 3 23 996 1017 995 1017 0.94

25 29 0.0087 0.63 10.8 3.7 2 23 1022 1044 1021 1044 0.93

26 29 0.00037 0.027 15.1 3.2 1 23 1049 1072 1049 1072 0.97

27 29 0.00032 0.023 15.3 5.3 1 23 1076 1099 1076 1099 0.97

28 29 0.00024 0.017 15.7 0.6 2 23 1106 1127 1105 1127 0.97

29 29 5.4e-05 0.0039 17.8 1.1 1 23 1133 1155 1133 1155 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.012	0.87	10.4	0.3	1	21	24	44	24	45	0.94
2	29	0.34	25	5.8	1.0	3	23	71	92	69	92	0.95
3	29	0.19	14	6.6	0.4	2	23	113	135	112	135	0.93
4	29	0.3	22	6.0	2.0	1	19	158	176	158	179	0.95
5	29	0.0017	0.12	13.1	2.1	1	23	268	291	268	291	0.94
6	29	0.098	7.1	7.5	0.0	2	23	319	341	318	341	0.94
7	29	0.013	0.95	10.2	0.4	1	23	363	386	363	386	0.95
8	29	6.2e-05	0.0045	17.6	0.8	3	23	393	414	392	414	0.96
9	29	0.00011	0.0083	16.7	1.3	1	23	419	442	419	442	0.95
10	29	0.012	0.89	10.3	0.1	2	23	448	470	447	470	0.90
11	29	0.0036	0.26	12.0	6.7	1	23	474	497	474	497	0.97
12	29	0.0064	0.47	11.2	0.2	2	23	504	525	503	525	0.96
13	29	0.05	3.6	8.4	0.3	1	20	531	550	531	552	0.87
14	29	6.2e-05	0.0045	17.6	2.5	1	23	596	618	596	618	0.96
15	29	0.21	15	6.4	0.0	2	23	646	668	645	668	0.90
16	29	7.5e-05	0.0055	17.3	1.4	2	23	689	711	688	711	0.95
17	29	0.00025	0.018	15.6	0.5	1	23	716	739	716	739	0.96
18	29	0.004	0.29	11.9	0.3	1	23	744	767	744	767	0.97
19	29	0.00053	0.038	14.6	0.4	2	23	770	792	770	792	0.96
20	29	1.3	94	4.0	2.3	3	22	801	820	800	820	0.95
21	29	0.0096	0.7	10.7	0.5	1	23	872	895	872	895	0.93
22	29	0.017	1.2	9.9	0.2	2	23	923	945	922	945	0.94
23	29	0.033	2.4	9.0	0.0	2	23	967	989	966	989	0.95
24	29	1.5e-05	0.0011	19.5	0.3	3	23	996	1017	995	1017	0.94
25	29	0.0087	0.63	10.8	3.7	2	23	1022	1044	1021	1044	0.93
26	29	0.00037	0.027	15.1	3.2	1	23	1049	1072	1049	1072	0.97
27	29	0.00032	0.023	15.3	5.3	1	23	1076	1099	1076	1099	0.97
28	29	0.00024	0.017	15.7	0.6	2	23	1106	1127	1105	1127	0.97
29	29	5.4e-05	0.0039	17.8	1.1	1	23	1133	1155	1133	1155	0.97

Sequence Information

Coding Sequence: ATGATTGAGGAAAATCTCCGattattgtttcaaaatacttCCGTGATACCTTTCAATTGGATCGGTAAATACGCTTGCTTCTATTGCGGTGAGAAAATTGAAGATTACGACCAACTAAAAAAGCATACGAAAGATTACTGCATAGAAAATAAGCATAACATTTCAGTAGACGTGGAGGGAAGGATAAAAGttgatatatcaaatattatttgtgacATTTGTAACAAGTCGTGGAATAGTATGGATATGATTTCGAAACATTTGAGGAGTTGTCATAACGTAGTTTTTAATACGACCGATACTTTACCACTAGTGCCATACAGACTGAAAGACTCGAGCTGTTTCTTTTGTGATTTGAAGTTTGATTCCATAAATTCCTTGATATCTCATGTTGATAGAGATCATCCCAAGCAGGTTATAACGTTGAATTGTGATgggaatttaaacaaaaagtcCGAATCACTTGCTGAATATAGgtgtaaaatatgttgtaaaaGTTTTCTAAGTATTTCGCAGCtaagaaaacataatatttcttgtGAAACGGGAACTCAAAACCGTTGCAACGCATCGGATTCTCTATTGTCGGATAAAACTGTAAGCGGAGATAAAGTGTGTATAGATTCCGTTGTCAATGGAAAAAATGCTGATTCAACttcaaatttaaagaaaataactaatatgCATGAAACTATAACCTCTCAACAATACAAGAAGCCAAACGTTAAGACAATAAGAAACAACATAGCGTGCATTCTCAACACATCAACAGCAgtaccatttaaatatttcatgagcAGATTTAGGTGTTTCTATTGTCCAAAAGATTTTGATGACTGCGAAGACCTGAAAGTACATTCCAGTTCCGAGCATCCGTTTTGTACTACCGAAATAAAATCCATGAAGCTGAGGAATAGGCATGACGGTGGTATTAAAGTTGATATTTCATTACTGTCGTGTAAGATATGtaagataaaaatagataGTTTAGATGCGTTGATAGATCATATGataaatgaacataaaatatgttacgaCAAAAGCATACCAAATAACTTGCAAGCTTACAAACTAGTCAAAGATAATTTTCCTTGTCCGTTTTGTGATGAATTGTTCAGATACTTTAGGACTTTGCTAAATCATGTTGCAAAACTTCATTCggacaataaaaacatatgcGTCCATTGCGGTTTGTCTTTCCGGAATTTGCCGAATTTGCGAGCTCATATCTCAAGAAGACATAGGGTTGCCAATTTCAAATGTCTCAAATGCGATTTGACCTTTACGTCCaacaattatttacaaacCCATTTAGGTAGAGTTCATGGAAATAAAGTTGTTGAGTGCCCTGAATGCGCTGAAAGGTTTACGTCAGTATATGAAATGCAAAGACATAAAATTGATGCGCATGCCTCGGGACATAAATGCATGCATTGTAACAAACTTTTTACAAGAAACTCCTTCATGGTCAATCATATAAGACGCACTCATCTAAAAGAAAAGAATGTGGAGTGCAGTGTGTGTAGCGAGCGATTCTTTGACGCTCAGCGCTTAAAGGTGCACATGGTGAAACATTACGGCGAAAGGAACTACCATTGTGATATCTGTGGGAAAAAGTTTCTGTGgaagaaaaatttaagagGACACATGGCAGAAGATTCAAGCAAGGGATATTTGTTCACAGATCAAAGGCCGTACGACCACTGTACCTCTGAGCGGAGGAGGAAAAACTTGCAAATATTGTTCAACAACACCACAATAATACCTTTCAAATGGCGTGGGAGATATCTATGTTTCTATTGCGGACAGAATTATAGCAATTAttcagatttaaaaaaacatacaaaatcaCACGGCCTATGTAACACTACGGATTACGcgcttaaaattataaaaggaaacaatatagaaataaaaattgacgtATCAGAAATAGTCTGTGAAATATGTTACGAGCCATTTTCAAATTTGAACGAGATTTTAGATCATTTGATCGGAAAACATGAAATGGATTATGATAGACACGTTGATATACCATTCCGAGAATACAGACTCAGTGATTGCAAATGTCAAATATGTGACAAACAATTCAGTTATTTTGGATAtcttataaatcatataaatatagtgcattcaataaatacttttgCGTGTGACAATTGTGGCTCTTCTTTTAATAAGAAGAGAGATTTAGCGTTGCATATACGACAATATCATCGTGAAGGGGGCTATCCATGTGACGAATGTTCAGAAATATTCGATACAAATGTACAGCGTAAAAAACATTCGAATACAGTTCATTATAGGAAATGTAAGATATGTCAAGCTAGGTTTCCATCATACGTGTTGTtgcaaaaacatataaaacttgACCATCCGAACGACGAAACTCAAAAACTGTGTATGTACTGTTCGAAAGAGTGTCAATCATCTCAGGGTATGAAACAGCATATGAAGAAATGTAAGTTGAAAAAGGAATTGATTACAGCTTCTATATTCCCCTACGAAAATCCATTACAGCcgaacaaaaaacaaaatgtaatgcaaataagaaaaaatatacaatgcgTTCTTAATATGTCAACGGCGATtccttttaagttttttgCAAAATTCTCTTGCTTTTATTGTTCCAAATATTTCGTCGAATTTGATGAACTTAAGGTACACGTCTTAGCGGATCACCCAATTTGTGATTTAAAagagaaatgtattaaaaattgtaaaggtGAAAGAATCACTGTCAAAATTGATATATCGACTTTATCGTGTAAGATTTGTTACCAATCAATATCAGATTTAGACGACCTCATACAACATTTAACGTCCAAACATTTAGCAGTATacgataaaacaataaaatgctTTGAACCgtttagaattataaaagataacatTCCATGCCCGATCTGTCCGAACGTTTTTCGCTATTTCGGCATTCTTTTGAGACATATAAACTCGGAACACAgcaataataacagaatatgTGATTTTTGTGGTCGTAGTTTCAAAAACGTATCAAATCTCAAAGTTCATATTACTTATGCTCATACCGGTGACTGTGAATGCGATGTTTGTGGAATGAAGTTTAAAAATCAATGGTGTTTAGGACGGCATAAAGCTAAATCACACGACGCGAAAGATTACAAATGTCCCAAATGTCCAGAAAGATTTCAATCTCAGTATCACAAACAAAAACATCTAATTAAAGTACACGATATAGGCCACAAGTGTACGTATTGCGAGAGAATGTTTACTAGGAATTCCTTTATGAAGGATCATGTAAGGCGGACGCATTTGAAAGAGAAAAACGTCCAATGTTCTGTTTGTAATGAAAAGTTCTTTGACAACTACCTTCTAAGAATGCATATGGTCAAACATAAAGGGGAAAGAAAATTTAGTTGCGAGGTTTGCGGAAAAACTTTCTTGAGGAGAAGTAATTTGAGCTCCCATAAGGAGATGCACAAGAAATACGGACATGtgtag
Protein Sequence: MIEENLRLLFQNTSVIPFNWIGKYACFYCGEKIEDYDQLKKHTKDYCIENKHNISVDVEGRIKVDISNIICDICNKSWNSMDMISKHLRSCHNVVFNTTDTLPLVPYRLKDSSCFFCDLKFDSINSLISHVDRDHPKQVITLNCDGNLNKKSESLAEYRCKICCKSFLSISQLRKHNISCETGTQNRCNASDSLLSDKTVSGDKVCIDSVVNGKNADSTSNLKKITNMHETITSQQYKKPNVKTIRNNIACILNTSTAVPFKYFMSRFRCFYCPKDFDDCEDLKVHSSSEHPFCTTEIKSMKLRNRHDGGIKVDISLLSCKICKIKIDSLDALIDHMINEHKICYDKSIPNNLQAYKLVKDNFPCPFCDELFRYFRTLLNHVAKLHSDNKNICVHCGLSFRNLPNLRAHISRRHRVANFKCLKCDLTFTSNNYLQTHLGRVHGNKVVECPECAERFTSVYEMQRHKIDAHASGHKCMHCNKLFTRNSFMVNHIRRTHLKEKNVECSVCSERFFDAQRLKVHMVKHYGERNYHCDICGKKFLWKKNLRGHMAEDSSKGYLFTDQRPYDHCTSERRRKNLQILFNNTTIIPFKWRGRYLCFYCGQNYSNYSDLKKHTKSHGLCNTTDYALKIIKGNNIEIKIDVSEIVCEICYEPFSNLNEILDHLIGKHEMDYDRHVDIPFREYRLSDCKCQICDKQFSYFGYLINHINIVHSINTFACDNCGSSFNKKRDLALHIRQYHREGGYPCDECSEIFDTNVQRKKHSNTVHYRKCKICQARFPSYVLLQKHIKLDHPNDETQKLCMYCSKECQSSQGMKQHMKKCKLKKELITASIFPYENPLQPNKKQNVMQIRKNIQCVLNMSTAIPFKFFAKFSCFYCSKYFVEFDELKVHVLADHPICDLKEKCIKNCKGERITVKIDISTLSCKICYQSISDLDDLIQHLTSKHLAVYDKTIKCFEPFRIIKDNIPCPICPNVFRYFGILLRHINSEHSNNNRICDFCGRSFKNVSNLKVHITYAHTGDCECDVCGMKFKNQWCLGRHKAKSHDAKDYKCPKCPERFQSQYHKQKHLIKVHDIGHKCTYCERMFTRNSFMKDHVRRTHLKEKNVQCSVCNEKFFDNYLLRMHMVKHKGERKFSCEVCGKTFLRRSNLSSHKEMHKKYGHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -