Dchr019367.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Danaus chrysippus
Gene Symbol
-
Assembly
GCA_004959915.1
Location
RPCZ01000016.1:1663263-1679837[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 46 0.1 7.4 7.4 0.1 1 20 206 225 206 227 0.94
2 46 0.029 2.1 9.2 0.3 2 22 255 275 254 277 0.89
3 46 3.8 2.8e+02 2.5 3.3 1 23 300 322 300 322 0.97
4 46 0.0027 0.2 12.4 0.8 1 23 326 348 326 348 0.98
5 46 0.027 2 9.3 1.2 1 23 353 376 353 376 0.92
6 46 0.06 4.3 8.2 0.4 2 23 384 406 383 406 0.93
7 46 0.001 0.075 13.7 6.1 1 23 413 435 413 436 0.95
8 46 0.0097 0.71 10.7 1.2 1 23 442 464 442 464 0.95
9 46 2.8e-06 0.0002 21.8 2.0 2 23 471 492 470 492 0.96
10 46 9.5e-06 0.00069 20.1 2.2 1 23 498 520 498 520 0.98
11 46 0.018 1.3 9.8 2.8 1 23 614 637 614 637 0.94
12 46 4.6 3.3e+02 2.3 0.6 2 23 663 685 662 685 0.91
13 46 0.06 4.3 8.2 5.1 3 23 710 730 708 730 0.96
14 46 0.0017 0.12 13.0 0.6 1 23 734 756 734 756 0.97
15 46 0.11 8.2 7.3 0.3 1 23 763 786 763 786 0.91
16 46 0.0035 0.26 12.0 1.3 2 23 794 816 793 816 0.95
17 46 2.4e-06 0.00018 22.0 1.2 2 23 822 844 821 844 0.97
18 46 2.9 2.1e+02 2.9 1.0 1 23 850 873 850 873 0.89
19 46 4.4e-07 3.2e-05 24.3 1.2 1 23 879 902 879 902 0.98
20 46 0.0095 0.69 10.7 0.0 1 23 994 1017 994 1017 0.94
21 46 0.0046 0.33 11.7 0.8 1 23 1088 1110 1088 1110 0.96
22 46 0.00042 0.031 14.9 0.3 1 23 1114 1136 1114 1136 0.98
23 46 0.031 2.3 9.1 1.6 1 23 1141 1164 1141 1164 0.93
24 46 0.0081 0.58 10.9 1.8 2 23 1172 1194 1171 1194 0.95
25 46 0.00028 0.02 15.5 1.0 2 23 1202 1224 1201 1224 0.97
26 46 0.0073 0.53 11.0 4.0 1 23 1229 1251 1229 1251 0.95
27 46 7.2 5.2e+02 1.6 0.1 1 8 1257 1264 1257 1269 0.91
28 46 0.029 2.1 9.2 1.1 1 23 1329 1352 1329 1352 0.91
29 46 6.5 4.7e+02 1.8 0.0 2 20 1377 1395 1376 1396 0.92
30 46 0.00078 0.056 14.1 0.9 2 23 1422 1443 1421 1443 0.97
31 46 0.002 0.15 12.8 0.0 1 23 1447 1469 1447 1469 0.98
32 46 0.036 2.6 8.9 1.0 1 23 1474 1497 1474 1497 0.92
33 46 1.4 1e+02 3.9 0.6 2 23 1505 1527 1505 1527 0.95
34 46 3.4e-05 0.0025 18.4 0.6 3 23 1536 1557 1534 1557 0.96
35 46 0.0012 0.084 13.6 3.1 1 23 1563 1585 1563 1585 0.97
36 46 2.3e-05 0.0017 18.9 2.2 1 23 1591 1613 1591 1613 0.98
37 46 0.0095 0.69 10.7 1.8 1 23 1680 1703 1680 1703 0.95
38 46 1.1 81 4.2 0.0 2 23 1730 1752 1729 1752 0.91
39 46 0.0074 0.54 11.0 2.6 2 23 1775 1796 1774 1796 0.96
40 46 0.45 33 5.4 0.7 1 17 1800 1816 1800 1822 0.86
41 46 0.027 2 9.2 2.1 1 23 1827 1850 1827 1850 0.96
42 46 0.81 58 4.6 4.8 1 23 1857 1880 1857 1880 0.94
43 46 0.0018 0.13 12.9 1.2 2 23 1888 1910 1887 1910 0.96
44 46 0.0055 0.4 11.4 3.5 1 23 1916 1938 1916 1938 0.97
45 46 0.00017 0.012 16.2 1.8 1 23 1944 1967 1944 1967 0.98
46 46 0.0018 0.13 13.0 0.7 2 23 1974 1996 1973 1996 0.93

Sequence Information

Coding Sequence
atggAGCAAAACATAAGTGACGGTATGTGCCGGTGTTGTGCATCAGAAGGTAGTTTTAAAGACTTTCAAACAACATACCATTGGATGGGCAAAGAAGAAGTGtattcaaaaatgttaaaggattgttttgatataactTTGTCTACCTCGGAGGTGATCAGTAACGGTGGTATATGCGAGGTCTGCATCACTCAACTCCGGAATGCATTGAACTTCAAGCGTCAGGTACAAGTGACCGAGGACAGGTTCAAGAAAATGGTCCACGAGACCGTTTTTAAATCAAATACAATCAAACTCGAGGTTTCGCGAGGCGACGAGGAGTCCGATAATGAAGAATCAGATAAATTATCAGaTTACGAAGTCGCTATCAAAGAGGAGAAAGAAGACGAAAAGCCCAAGAAGCGTCAGCCTAAAGCGACTACCTCCAAGATGAAGAAGGCCAAAACGGAAGGAGAACCTTCAAAACGAACGGACGGCGAACCGAACAAACgcaagaaaaagaaaaagaaatcgGAGGTAAGCGCTACACCAGAGCGCATTGAGCACAGGGTCAACCTGACAGCCATATTGCAGTTCTCCAACGCAAGTCCGTTCCGGGATAAGACAATGAAAGGCTTCTCCTGTCTCTACTGCGCGGAGAGTTTTCAAGATATAGACGAACTAAGAGCGCATACGTCCCAGCAGAATGAGAAGGACAAAATTAACACAATGCTCGATTACAAACTTAGTTATAATCCGATCAAATTGGACATAACTAATCTCCAATGCACCGTCTGCCACAAAGATTTGAAAGATCTGAACGAACTCAAAGATCATTTGGTGGCTGTTCACAATAAGACCATACATAAGGACATCAAAGACACAATACTTCCATTCAGATTAGAGAACGGTCATAACTTCACTTGCGTCATATGTTCTGTTGTTCATATATCGTTCAAAAATCTATATCACCACATGAGTAGCCATTATCGTAATTATTGCTGTAAGAAATGCGGTGCTGGTTATATTACTATAGCGGCGTTGAGGAAGCACGGCAAAACACACTACCAAGGTCATTTCCCTTGCGACTTCTGTGATAAATCATACACTTCGCTAACCAAGAAACGAAATCACGAAAAGGGGGTACACACTGGCGGCTGGCTTAGAAATAAATGTCCACATTGTCCAGAGATTTTTGTCAGCTATTATGACCGCAGCGAGCATTTGGTCAAAGTTCACAACGAGGCACCAGTTGTATACCCTTGCAATGCGTGCAATAAGACGTACAAGAAGAAATTCGAATTAAACAGACACATAAAGCACCACCACTTACAGCAGAGGAGTTTTCTATGTGATAAATGCAATGCCAAGTTCTTTTCTAAGCGCGGTCTAGTCGATCATATGACGCGGCATACTGGTTCGGAGATGTGTTCCTGTGATGTATGCGGTAAAGCCTTCTCGAGGATACGGACGCTGAGAGAGCATATGCGGACACACGAAGACGATAAACGCTTCCAATGCGAAGTATGCAAGAAGACATTCATGCAGAAGAGCAGTTTGAAGAGTCATGTGAAGCTGCATCAGGATGACTTGGATATATTCAAAGAATTTGATGacgtaaaacatttaatagatGATAGGGAGATGACTCTAAAACAAATAGCGGCTGAGAACAAGATGAGATCTATAGggACCCGAAAAAAAAGGGAAACGGCCGTAAAGGAGGAAACTGGGCAGACGTTGAATAGTGTTGTGTACCGTGAAAAGCATCTACGTGAGATGCAGAAGCAGTGGCACAATCTAACTACCCTCCTAAAATACTCTAACGTTACCCCGTTCAAGGACAGAAACGACGCGGGCTATATATGCGCGTATTGCTTTAAGACCTTCCCAGATCCAAATGTCCTAAGACATCACACACATTATGACCACGTCAAGGAAAAACCGACGTACAAAGCCGGTTCTGGTATAAGCagtttcgtagtttttttGGATATAGTCGATTTAAAATGCACGTTATGTGGTTTGTCCATGGAGAGCATCAATTGTCTTACCGAGCATCTAGTCAAAGATCACGATAAGAAATACTATTTAGGTGTGACTGACTACTTCCAGCCGTTTATCCTAACTAGCGAGCAGCAAATACACTGCTGTCTGTGCGACGAAGTTTTccataatatgaaattattgatgCAACACATGAACATGCATTACCGTAATTTCATCTGTACTACATGCGGGGCTGGTTttgtcaatagttttcgcCTCAAAAGGCACGAGACAACACATTTAAAGAAGAAAACTGGTTTTGCGTGCCGGCACTGCGGGATGGTATTCGCAGCTGAATCGAAAAAGAAAGCTCACGTGAACGCCGAGCATAAGGGCATAGAAGGACACAGCGTGTGTCAAATATGCAAGGCAAGATTTAAGAATTACTATCAGAAGACCAGGCATATGATGCAAGTACATAACGTGGAAGGCATTAAATGTGATAAGTGTGATAAGCGTTTTAATCTTAAATCTAATCTAATGCTGCATATGCGGAGCGTGCATTTGAAAGAACGACCATACGAGTGTTCGGTGTGCAGCATGGGATTCTTTATAAAGCGGCATATGCTAGGACATTATATGGCCACACATACTAATGAGAGGAAATTTAAATGCGACGTATGCGGTAAGGCGTACGCTACGCAAAATAGCTTAAGGAAACACATGAAGAAGAATCACGGTGTGGAGGATCAAACAACATTAATCGAAGTTGTTATCAAACAAGAACCGATGTCTGACTCAGAACTACCAGAGGACGCTAAACCCGATAcagttttcaatattaaaccaGAGAAAGATAGCGGTGGGGATgttaaaaaagtaaagaaaactgCATCCGAAAAGAGATCCAAAAAAGATCAGATTATAGAAATGgaaaagcatttaaaaaatataagcacAATACTACTTAACACAAACGCTACGCCCATAAGATATCACGACGGTGCAAATTATGTTTGTGCACTCTGCCCAGAAACATATCCTTTGCCATCGGATTTGAAAGTTCACGTGTTAGAGGAGCACGATGAAATAGATAAATCGTCTTTCATGGAAGGTCATAGATTGACTTCCTACATGGTCAAGTTGGATATAACAAATTTGCGTTGTTTGATTTGCCACAACGATGTAGAAAGCTTCGATCCACTTTTCGATCATCTAAAATCGGTGCACGGAAAAGAAATGCATACGGATATACCGAACCATATCCTTCCCTTTAGGTTCGTTGGGAATGGTTTTGATTGCGTCGTCTGTCCCAAGTCCTTTGAGCATTTTAAACTAGTCCAGGAGCACATGACTGTGCATTACAGGAACTACATCTGCGAAACTTGTAATGCACCCTTTGTTAATAAACGAACGCTACAGAATCACGCCAACAGGCACAAGAAAGGCGATTTCCAGTGCAGCCAATGCCCAAAAATATTCGATACAAATCGCAAGAAACTGAATCACGTGAAATTTGTTCACGACGGTAATTACAAGAGGAAGAAATGCCCGTACTGCCAGGAGAAGTTCACGAATTACGCTAAGAAGAGATCTCATATGGTTAAAGAGCATGGAGCTGAGCCTTTATCTGTGAAATGTGatatatgcaaaaaaatatttagcacGCGGGCGAGATTAAGAGGACACACTCGCAGAGATCATATGGAGTGTCAGCACGCGTGCCATAATTGTGATATGAGGTTCTTCACGAAGTTGGAACTGGTTAAACATATGGTGAAACATTCGCCATTAAAGGAATACCAGTGCGACATTTgtcAGAAAATTATCGTCGTAAATGGTGAACAAATGGAAGATTTACTGCAggaaaaatacaagaaaattaaAGTTGGAATGGGAAGAAAGGAAAATAGTAAATCAGTTATTAGAGGGGAAGTTATAAAGCATCGTCAGAATGTTATGGAAATACTGTTGAATTCAAATGCGACGCCAATTCGTTGTAAAAATGATCTTGGGTATAGCTGCATATTTTGCAATGAACACTACCCAAGTCCATCTGATTTGAAGAAACACACATTAAATGAACACGATGAGGAAGAGGTTTTAAAGGTAGTTAAGGAAATCCGAATGTACACTGTTAAATTGGATATAACTAATCTACACTGTACAATATGTGAAACTGATTTAGATAATATCAGTGACCTGGTTGAACATTTGCTTTGTTTCCATAGCCGTATACTACATTCGGAATACACGAACCATCTAGTGCCATTCAAATTTGATGATCAAGATTTGAAATGTGCCATATGTGAGAATAAATTCACAAAGTTCAGAAACTTGATTGAACACATGAACACGCATTTCAGGAATTACGTGTGCGATGTCTGTGGAGCTGGTTTCGTGAATCGTGATATACTAAGGAGCCATCTAAAGATACATAAGATAGGCACATTCAATTGTGAATTGTGTCCGAAATCTTTTAATACTTTGATGAAAAAGAGGTCACATGTGACTTCGGTTCACCAAAAAGGCTATATGATACGAAAATGTGGTTACTGTAATGAATTGTTCgatgattataataagaaaaatgccCATCTAGCAAAATTCCATGGCGTCGATACGGCCGCTGTGAACTGTAAACTATGTGACAAAACTTTCTCAAACCAAACGGCAGTTAGACTTCACATAAGGAAGATACATTTGTTGGAAAGGAAACATGAATGTGATCTATGCGAAAAGAGATTCTTCAACAAAAAGGATATGATGAAACATATGGTCAGTCACACGAAagatagaaaatattgttgcACTATTTGTGGGAAGTCTTTTGGCCTTAAATTTACTTTGGTCCAACATATGCGAGTGCATGATGaggatacaaaaataatgaacaGTGTACTACGTAAACTCAAAAAGGAAAAGTTAAATACGGGCGACGACTTCGTTCAGAGAACAGATCTGCCAAGAGGTAGACAGGGAGAGATTTTAGACAAACATCGCACTAATATTCGCGAAATTATCAAATGGTCGAACGCTACGCCGATACGATGCCGTGGTGGAATCGGATATGCATGCTGTTTCTGTTCAGAACAATTTCCAAATCCTGCTGACTTAAAACATCACACCATTAAAGCACACGATGATATCACGAAGTCTAAGTTCATGAAGGGTAGAGATATGTATGGATATTTTGTCAAATTAGATATTACTTGTCTACAATGCAACATTTGCGGACTAGAAATTGACACGTTGGAGCAAATCATGATGCATTTGAAAGACGAGCATGACAAAAGCATCAGTACTGATATATCAAATCACATATTACCTTTCAAATTTGACAGCGAGAATTTGCGATGTTTCATGTGCcacaatgtttttaatagattCAAAGCATTACAAGAACACATGAACTTACATTATAGGAATTACGTATGTGAAGTCTGCGACGCTGGTTTCGTCAATCGGCATCTCCTTTTATGTCACAACGAGGGGCACAAAACTGGTACATTTGCTTGCGATCATTGTCCAAAAATCTTTGACACGCTAAGGAAGAGAAAATTGCACGAAAGGAAGATTCACAACGGTTTGAACATGCCACATAAATGCGGATATTGCAACGAGAGATTTAAGGAGAACTGTTACAAAAATGAACATCTCGCCAAAGTCCATGGCATAATAGGTCCGTCTATCAAATGTCAAGCCTGCGAGAAAACATTTTCGACGCAGCAGACTTGGCTCTTGCATATGAAGAAGTACCATTTGATGCAGAGACAGCACAAATGCACTAAATGCGAAATGGATTTCTTTTCTAAGAGGGAACTCACCGACCATATGGTTAAACACACTGGAACCAGGGACTATAGATGTGAAATGTGTTTCAAATCGTATGGAAGATTGAAAACTTTGAAAGAACACATAAGAAGACTCCATCCAGAAGACAGAGACATCAAATGCGTTCATTGCGGACAAGCTTTTGCGAAGAGATTCGCTCTGAAAAGTCATTTACTTGCTAAACATGGacaaacattataa
Protein Sequence
MEQNISDGMCRCCASEGSFKDFQTTYHWMGKEEVYSKMLKDCFDITLSTSEVISNGGICEVCITQLRNALNFKRQVQVTEDRFKKMVHETVFKSNTIKLEVSRGDEESDNEESDKLSDYEVAIKEEKEDEKPKKRQPKATTSKMKKAKTEGEPSKRTDGEPNKRKKKKKKSEVSATPERIEHRVNLTAILQFSNASPFRDKTMKGFSCLYCAESFQDIDELRAHTSQQNEKDKINTMLDYKLSYNPIKLDITNLQCTVCHKDLKDLNELKDHLVAVHNKTIHKDIKDTILPFRLENGHNFTCVICSVVHISFKNLYHHMSSHYRNYCCKKCGAGYITIAALRKHGKTHYQGHFPCDFCDKSYTSLTKKRNHEKGVHTGGWLRNKCPHCPEIFVSYYDRSEHLVKVHNEAPVVYPCNACNKTYKKKFELNRHIKHHHLQQRSFLCDKCNAKFFSKRGLVDHMTRHTGSEMCSCDVCGKAFSRIRTLREHMRTHEDDKRFQCEVCKKTFMQKSSLKSHVKLHQDDLDIFKEFDDVKHLIDDREMTLKQIAAENKMRSIGTRKKRETAVKEETGQTLNSVVYREKHLREMQKQWHNLTTLLKYSNVTPFKDRNDAGYICAYCFKTFPDPNVLRHHTHYDHVKEKPTYKAGSGISSFVVFLDIVDLKCTLCGLSMESINCLTEHLVKDHDKKYYLGVTDYFQPFILTSEQQIHCCLCDEVFHNMKLLMQHMNMHYRNFICTTCGAGFVNSFRLKRHETTHLKKKTGFACRHCGMVFAAESKKKAHVNAEHKGIEGHSVCQICKARFKNYYQKTRHMMQVHNVEGIKCDKCDKRFNLKSNLMLHMRSVHLKERPYECSVCSMGFFIKRHMLGHYMATHTNERKFKCDVCGKAYATQNSLRKHMKKNHGVEDQTTLIEVVIKQEPMSDSELPEDAKPDTVFNIKPEKDSGGDVKKVKKTASEKRSKKDQIIEMEKHLKNISTILLNTNATPIRYHDGANYVCALCPETYPLPSDLKVHVLEEHDEIDKSSFMEGHRLTSYMVKLDITNLRCLICHNDVESFDPLFDHLKSVHGKEMHTDIPNHILPFRFVGNGFDCVVCPKSFEHFKLVQEHMTVHYRNYICETCNAPFVNKRTLQNHANRHKKGDFQCSQCPKIFDTNRKKLNHVKFVHDGNYKRKKCPYCQEKFTNYAKKRSHMVKEHGAEPLSVKCDICKKIFSTRARLRGHTRRDHMECQHACHNCDMRFFTKLELVKHMVKHSPLKEYQCDICQKIIVVNGEQMEDLLQEKYKKIKVGMGRKENSKSVIRGEVIKHRQNVMEILLNSNATPIRCKNDLGYSCIFCNEHYPSPSDLKKHTLNEHDEEEVLKVVKEIRMYTVKLDITNLHCTICETDLDNISDLVEHLLCFHSRILHSEYTNHLVPFKFDDQDLKCAICENKFTKFRNLIEHMNTHFRNYVCDVCGAGFVNRDILRSHLKIHKIGTFNCELCPKSFNTLMKKRSHVTSVHQKGYMIRKCGYCNELFDDYNKKNAHLAKFHGVDTAAVNCKLCDKTFSNQTAVRLHIRKIHLLERKHECDLCEKRFFNKKDMMKHMVSHTKDRKYCCTICGKSFGLKFTLVQHMRVHDEDTKIMNSVLRKLKKEKLNTGDDFVQRTDLPRGRQGEILDKHRTNIREIIKWSNATPIRCRGGIGYACCFCSEQFPNPADLKHHTIKAHDDITKSKFMKGRDMYGYFVKLDITCLQCNICGLEIDTLEQIMMHLKDEHDKSISTDISNHILPFKFDSENLRCFMCHNVFNRFKALQEHMNLHYRNYVCEVCDAGFVNRHLLLCHNEGHKTGTFACDHCPKIFDTLRKRKLHERKIHNGLNMPHKCGYCNERFKENCYKNEHLAKVHGIIGPSIKCQACEKTFSTQQTWLLHMKKYHLMQRQHKCTKCEMDFFSKRELTDHMVKHTGTRDYRCEMCFKSYGRLKTLKEHIRRLHPEDRDIKCVHCGQAFAKRFALKSHLLAKHGQTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-