Basic Information

Gene Symbol
-
Assembly
GCA_004959915.1
Location
RPCZ01000062.1:117013-121979[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 6.6 6.8e+03 -2.5 0.1 1 13 73 85 73 87 0.87
2 6 0.048 49 4.3 0.0 22 45 342 366 315 367 0.83
3 6 0.0014 1.4 9.3 0.2 22 43 444 464 416 467 0.82
4 6 0.0096 9.9 6.6 0.1 23 45 592 613 569 614 0.86
5 6 0.00017 0.18 12.1 0.1 3 44 665 715 663 717 0.79
6 6 0.0017 1.7 9.0 0.1 22 45 850 874 834 875 0.86

Sequence Information

Coding Sequence
atggagCAAATCGTGGTTAAAACTGAGGTGCAACCAAATGGGGacatattactattttatgttGATGAAAACGAAGAAGCAGAGGCTGGGACATTTGACCAAGAAAATGGGAATGTCATGCACATGCTGCCGGAAACAAAATATGTGATAGAAGACAATGGAGAAGGGGAGTCTGCTGACGAACTGGATATCGCACAAGCCGCTGAGGAAGTAGCTAAAGAAACTTGGCtgaatgaagaaataaaacgaCTTATAGTCTtctatattgataataaagaaacattcCTTAGTGGGAcaacaaagaaaaaacatttgtgGGCTGTAGCTTGCAGAACTATACTCACAGGCAAGAATCCGGTTTCATGTGAAGTTAAATTAAGAATGCTCAAACAACAGTTCATACAACTATGTTTAGAGAAACAGAAAGGGAATATCGTCACTTGGCCCTATTATGATCTATGCCATCAAGCATTCTATGAAGATAGCTTTGAAACTGTAACAAATGATTCCGAGCCAAATAAAGTGATTATCAACATGCCCATACAGAATGTTGTCAATCAAGATGGAATCTTAGTTGTGAAGAAAGTTAATAGCGGCCAAGGTAAAGATGTTGATGAAAAAGTTGAAGCCATGctcaaactttatataaagcataagaaaacatttaagaGGAATAATCATATGCCAAGAGGTTTGTGGGAAACAATAGCCTTAGAAATGGGTGAAGATGATGTTGAATACTGGCACAAAAGATTTCTGAATTTCAAACAGCATTATGTCAGGAtgctttataaaaagaaagaaagcGGCCCCGAAAATATTCATTGGccgtatatgaaatatttcgaTCACATTTTCTGTGACGATGAGGAGTTTCAGAAGAAATTTCTTCCCAGTAATGAAGATGACGACAGCCAAGATACTGAACTCCAAGAAGATATATGGAGTGATACAGAAAAAACTTTTCTTGTCAAATATTACTATGATTGCTTCCAAGAATTTCAAGATTCGACCATACCAAACCAATTTCTATGGCAGGAAGTTGGTAGATTACTCAATAGAAAACCAGATGTTTGCAAGGATAAATACAACGAGTTAAAGAACCaacatttcaatttacttCTAGAAAGGGTATATGATATGACAAATAGGGTGCCAATGGccattatatttgacaatataATCGCAAAAGAGACGTTAATCGAATTAGATCAGCCAGCGAAAAGGTCGGATTCTTCAGACATATGGAAAACTGAGCAAATTGATGAATTGGttgaatatttgtatgaaaatattaacatgCTAAAAGATCCCATATGTTACTATGTTTGTTGGGCGACTATATCTAAGAAAATCGATAGAACTGTACAATCATGTATGAAACAGTGGGATTCATTGAAAAcgctttataaaagtatattagaGGATAAGAAGGAAAATTCTGATATGCAAATAGATTGGAGATACATAGATTTGTTTGATAGAATATTTGATTATGGAATGGATACTAACTTGCTCGATGGCtatgaaaaaacaaaagaacttAGCAATAATACTAGTAACGGAAAAGTTGGAGttaaaaaaataacaataaaaggaGATTACGAAAATTTTACTATGGACGGTACAGACGATGAAGAATCGTACGACGAAAGAGGATTCACAAAACGTTCCAAGAAAAGAAACGGTGACACGAAAGCCTTCAAAATATTAGAGTACTATTTGAAGAACAAAGACAAATTTTCTTCATCGCAACAAAAGAAACTCGCATTATGGGAAATACTAGCAAAACAAATCGGCCTCTCAGCTACCGAGTGTGCCCATAGATTTCGTAATTTCAAACAAGTTTATATAGGTTACGTTCAACGGGAAATAAACAAACCCGAAATGCCAATATTATGGccatattatacattatgcAAGAAAGTTTTCGGATATAGAGCTATAAAGTCCAAGTTAAAGAACGGAAAACTAGAATCTGAGGATGGTGAAGATTGGTCGGCgaaggaaataaaacaattgataAACTATTTCTCAAGAAACTATCACGATTTGGTTGATAATATCGAAGACAAATCCAGATGGGTCCAAGTAGCGCAGGAAATGGGCAGAACTGAGGGTAGTTGTTGTGATAAATTTCTAGAATTAAGAAAATCCTATAGGAAACTTAAGACAATGAAATCAAGGAATCCAGATGTTAAAGTTTCTTGGAAGTATTTCAATATGATCGATGAGATATATCAAAACGGCGCGGAAAATATTGAGGTCTTGGAAGAAATGGATTTTGAAGAAACAACTGCCTTTGATGTTAAGACGGAAATTCAGGAAGaCGATGACTTCCAATGCATAATAGTTGTACCCGAAGGAGATGATATTAGTAACGCTCAGATTATAATACAAGACGAGAAAAATTCAACAGAAGACAACGCAGAGGCAACTGGAGttaggaaaaatattacagtatGGAATAGAAAAAGCAAGAGAcgcttgttaatattatatctgaaatatttaagatcAAATAAAGACAGAGAAATCAATTCAAAAGATATGTGGACAGAAATTTCTTCACAATTAGAAGCCAAAACACCAGTATCCTGTAAGAAAATGTACATGAAACTGAAGAATCAATACAATatagataaagaaaaaaatattataacacccTACAACgctataatagaaaaaatattggcTATAAAACCTAGATTCGctaaatctaataaaattaaatcattagaAGACATAACTGTTTACAATGATGTACCAATGTCTGAGGAAAAAGTCCTCAATgctttgaattattatatgcaGAATCTAGAAGACTTTGTGAGTCCTAAATTCGAAAAACGATATCTATGGATCGAACTTGCCAAATATATATCTGAATCGGTGACAGATgtgtatagtaaaataaattatatgaagcaGAATCATGATAATATTGATTCACCGTTCCGTGAAGTTGTTCAAGCTATTATTGCAAAGGAAAATACGTTGAAAGaagttaataaagatttaagtACAGTCAAAGATGATGAAAATGAAGGACAAATTTGGTCTGATTTGGAAATTGAACGTCTTTTAACTTGGTATTTGGCACATTTAGACAAATTTAAGAACCCGAAATTCGTCAGAAGCTATCTTTGGATGGAGGCATCTGATATATTGAAGAAAAGTCCACTTGTCTGTTCAAAGAAAATGCTAGAAATAAGATCACAATACCGAAGCATGGTTAAAGAAAATCCAGAGGAATTAAACAAttggaaattttataaattatgtcaaAGAATTTATGGTACCGGAAAGAAGAGTAATTAA
Protein Sequence
MEQIVVKTEVQPNGDILLFYVDENEEAEAGTFDQENGNVMHMLPETKYVIEDNGEGESADELDIAQAAEEVAKETWLNEEIKRLIVFYIDNKETFLSGTTKKKHLWAVACRTILTGKNPVSCEVKLRMLKQQFIQLCLEKQKGNIVTWPYYDLCHQAFYEDSFETVTNDSEPNKVIINMPIQNVVNQDGILVVKKVNSGQGKDVDEKVEAMLKLYIKHKKTFKRNNHMPRGLWETIALEMGEDDVEYWHKRFLNFKQHYVRMLYKKKESGPENIHWPYMKYFDHIFCDDEEFQKKFLPSNEDDDSQDTELQEDIWSDTEKTFLVKYYYDCFQEFQDSTIPNQFLWQEVGRLLNRKPDVCKDKYNELKNQHFNLLLERVYDMTNRVPMAIIFDNIIAKETLIELDQPAKRSDSSDIWKTEQIDELVEYLYENINMLKDPICYYVCWATISKKIDRTVQSCMKQWDSLKTLYKSILEDKKENSDMQIDWRYIDLFDRIFDYGMDTNLLDGYEKTKELSNNTSNGKVGVKKITIKGDYENFTMDGTDDEESYDERGFTKRSKKRNGDTKAFKILEYYLKNKDKFSSSQQKKLALWEILAKQIGLSATECAHRFRNFKQVYIGYVQREINKPEMPILWPYYTLCKKVFGYRAIKSKLKNGKLESEDGEDWSAKEIKQLINYFSRNYHDLVDNIEDKSRWVQVAQEMGRTEGSCCDKFLELRKSYRKLKTMKSRNPDVKVSWKYFNMIDEIYQNGAENIEVLEEMDFEETTAFDVKTEIQEDDDFQCIIVVPEGDDISNAQIIIQDEKNSTEDNAEATGVRKNITVWNRKSKRRLLILYLKYLRSNKDREINSKDMWTEISSQLEAKTPVSCKKMYMKLKNQYNIDKEKNIITPYNAIIEKILAIKPRFAKSNKIKSLEDITVYNDVPMSEEKVLNALNYYMQNLEDFVSPKFEKRYLWIELAKYISESVTDVYSKINYMKQNHDNIDSPFREVVQAIIAKENTLKEVNKDLSTVKDDENEGQIWSDLEIERLLTWYLAHLDKFKNPKFVRSYLWMEASDILKKSPLVCSKKMLEIRSQYRSMVKENPEELNNWKFYKLCQRIYGTGKKSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00958623;
90% Identity
iTF_00421293;
80% Identity
-