Dchr009951.1
Basic Information
- Insect
- Danaus chrysippus
- Gene Symbol
- -
- Assembly
- GCA_004959915.1
- Location
- RPCZ01000104.1:936206-937030[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-10 1e-07 31.7 0.0 1 38 8 45 8 50 0.92 2 2 6.7 2.8e+03 -1.7 0.0 26 39 60 73 59 74 0.80
Sequence Information
- Coding Sequence
- atGCCAAAGAGAAGGTTATGGGATCCTGAAGCAATGAAACAAGCTATTGAAGCTTTGCGAACTAAAAAAATGGGGTATAAAAAGgcagttaaattatttagtgtgCCAAGAGCTACTTTGAAAGATTATGTAAAAATTTCTACTGATGAAGAAGATAGTGACGATAATGATGCTGAATACCCAGTTTgtcataaaagtttttcaaaagTTAAAAAGGGAGAGAAATGGATAAGGTGCACAAAATGTTTCGAATGGATGCATGAGAATTGCGTTGATAATCCAAGAGCTAATCTTATTTGTGAGACTTGTTTTGAgacttaa
- Protein Sequence
- MPKRRLWDPEAMKQAIEALRTKKMGYKKAVKLFSVPRATLKDYVKISTDEEDSDDNDAEYPVCHKSFSKVKKGEKWIRCTKCFEWMHENCVDNPRANLICETCFET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -