Dvit007435.1
Basic Information
- Insect
- Daktulosphaira vitifoliae
- Gene Symbol
- stc
- Assembly
- None
- Location
- scaffold58:517004-529846[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.55 1.4e+04 -3.3 0.5 15 18 123 126 122 127 0.79 2 19 0.76 1.9e+04 -3.7 1.6 15 19 150 154 149 154 0.81 3 19 0.023 5.9e+02 1.1 0.3 4 10 182 188 181 190 0.95 4 19 1.6e-06 0.04 14.4 16.2 3 18 202 217 201 218 0.94 5 19 0.32 7.9e+03 -2.5 0.8 6 10 244 248 243 249 0.84 6 19 3.9e-08 0.00098 19.6 10.4 1 18 254 271 254 272 0.92 7 19 0.83 2.1e+04 -3.9 0.7 5 10 274 279 274 279 0.86 8 19 0.56 1.4e+04 -3.3 0.9 6 10 302 306 301 306 0.83 9 19 1.2e-07 0.003 18.0 11.2 1 18 312 329 312 330 0.96 10 19 0.14 3.6e+03 -1.4 1.0 5 10 361 366 361 366 0.96 11 19 3.1e-05 0.77 10.3 13.6 4 18 379 393 372 394 0.86 12 19 1 2.5e+04 -4.8 4.0 5 10 420 425 416 425 0.62 13 19 0.004 1e+02 3.6 7.7 1 11 431 441 431 442 0.94 14 19 0.16 4.2e+03 -1.6 0.3 4 10 446 452 445 452 0.92 15 19 4.1e-07 0.01 16.3 9.4 1 18 458 475 458 476 0.92 16 19 1 2.5e+04 -5.1 1.7 14 18 504 509 504 510 0.56 17 19 0.37 9.2e+03 -2.7 10.9 1 18 515 532 515 533 0.90 18 19 0.00064 16 6.1 14.9 3 19 571 589 559 592 0.86 19 19 2.1e-06 0.052 14.0 16.0 1 18 599 617 599 618 0.93
Sequence Information
- Coding Sequence
- ATGCCTAGAAATTATAGCAGAAAAAGAACTGATCATTTGGGTAATTCAAATAGGTTACAAAGTACATCAAATCTGTCTCCTAATGCACCAGAATTTGTTCCTTCAGTTGAAAGTCATGATATACCTGATATTCAAGTACAAGATGAACCAATCATATCGATGACTTTTTATGGAAACTCTTTGAGTAACTTTAGTAATGAAAACGGTACAAAGAGTTCTGAAGATAAAACAGTTACTACTGAATTAACTACCTCTAATACTTCTAACTTATCGCAAAGAGATGTTTTAATTGACCTTTTAAATAGTGGTCAAGCAGACTGTGTGGTTTGTTATGAACAAACAGCAAATGACGAACCAATATGGAGTTGTCAAAATTGTTATCAAATTTTTCACTTAAAATGTATTATGGTTTGGTTTTTGAAATCATATAATGGAACTAATTGGAGGTGTCCAGCTTGTCAAAATGAAGTTAAAGGAAAACCAGTTTATATGTGTTTTTGTGGCAGCTATCCAAATCCCTTTTCTAATAATGTAGATATACCACATTCATGTGGTCAAGTCTGTGGAAAGCAAAAAAAAAATTCTAATGAAACATATAGTTGTCATCATAAATGTACTCTGTTATGTCATCCAGGGCCGTGTCCTACTTGTGTAGTCCAAATACAAAGAAATTGTGGCTGTGGAAAGACTAAAGTATATGTCCAATGTGGGAAATCTTCTCCATTGTCATGTCAAAATACTTGCTCAAAACAATTACATTGCAAAAATCATGTTTGTGAAAAAATATGCCATGCTGGAGACTGTGATCCATGTAATAAAAACTGTCTTCAAGTGTGTTATTGTGGCTCTTCACAAAGACAAGTGCCATGTACTAGAGAAAATGCAATGGTTGTTTATTACAGTTGCAGTAAACCATGTAATAAAAAACTTTCATGTAATAATCATGTTTGTCAACAACTGTGTCATATGGGGCAATGTGAACCGTGTGCTAAACTAATTGCTGACAGATGTCCTTGTGGTAAGAGATTACTCTCCAAGGATGAGCTTGATAATCGAAAATCTTGTACATTGCCAATCCCAACGTGCAATGAGCTTTGTGAAAAACCACTAGGTTGTGGTCAACCAGAATCACCTCATTTGTGTAAACAAAAATGTCATGAAGGTCCATGTTCTAAATGTAACCTAAAAACTAGATATATATGCCGCTGTGGAAATAGATCAAAAGAAATAAAATGTGCAACTGTTACTTGTGAACTTACTTGTAAAAAGAAATGTAATAAGATATTGTCTTGTGGTAAACATAGGTGTACTATTCTTTGTTGCAATGCACAAGATCATATTTGTGATAGAATTTGTAACGGATTGTTGAATTGTCGTCAACACCGATGTGATAGAATGTGCCATACAGGTAGCTGTAATACCTGTTACATTTCAAGTTATGAAGCATTATACTGTCATTGTGGTAATACATATATTCCTCCCCCTGTAAGGTGTGGAACACGTAGACCCCCTTGTTCTCTACCTTGTTCAAGAGAACATGAATGTGGTCATCCAGCTACACACGTTTGTCATGACGAAGATCAATGCCCCCCTTGTATAGCTCTTACAGAAAAACTTTGTTATGGTGGTCATGAGTTACGTTTTGCTATTCCTTGTCATATAAAGAATGTGTCATGTGGTATGCCTTGTGGAAATCTTTTACCATGTAAACTACATAAATGTATCAAACCCTGTCACCCAGCACCGTGTGATAGTAAACCATGTCAGTTACCATGCAATTTATTAAAAACAGAATGTGGTCATCCATGTTCAAAACCTTGCCACACTGGCCCATGTCCAGTAAAGTCTTGTAGAATAATGGTAAATGTTAGTTGTCCATGTGGAAATATAACTGAAACTAGATTATGTTCTGATCCTAAAGTAAATGAATATCGTCTACAGCTTCAAACACAATCTATGAGCTTTTTGGATAATATAGTGGTATCAAAGTCAACTATTAAAACTTTTAAAATATTGGAATGCACTTCTGAATGCACCAAAATTGAGAGAAACCGACGCATTGCTTTAGCATTACAAATTCGAAATCCAGATTTATCACCTAATGTTACACCTAGATACTCAGATTTCATGAAAGACTTTGCAAAAAAAGATGCATCATTTTGCAATTATATTCATGAAAAACTTGCTGAGCTTGTTACAAATGCTAAACAATCTAAACAAAATTCACGTAGTCATTCGTTTGAAGTAATGAAATATGAGAAACGTAAGTTAGTACATGAATATTGTGAACACTTTGGATGTGAATCAGTTGCTTATGATTCTGAACCTAATAGGAATGTGGTAGCTACAGCTCTTAGAGACAAGTCGTGGTTGCCAAATTATAGTGTTGTTGAAGTTTTACAACGAGAAGGTGGATGTCCACGAGTCAATCCATTTTCTAGTATTCAAAAGCGAAATATGGTGATTCTAAATAAAAAATAA
- Protein Sequence
- MPRNYSRKRTDHLGNSNRLQSTSNLSPNAPEFVPSVESHDIPDIQVQDEPIISMTFYGNSLSNFSNENGTKSSEDKTVTTELTTSNTSNLSQRDVLIDLLNSGQADCVVCYEQTANDEPIWSCQNCYQIFHLKCIMVWFLKSYNGTNWRCPACQNEVKGKPVYMCFCGSYPNPFSNNVDIPHSCGQVCGKQKKNSNETYSCHHKCTLLCHPGPCPTCVVQIQRNCGCGKTKVYVQCGKSSPLSCQNTCSKQLHCKNHVCEKICHAGDCDPCNKNCLQVCYCGSSQRQVPCTRENAMVVYYSCSKPCNKKLSCNNHVCQQLCHMGQCEPCAKLIADRCPCGKRLLSKDELDNRKSCTLPIPTCNELCEKPLGCGQPESPHLCKQKCHEGPCSKCNLKTRYICRCGNRSKEIKCATVTCELTCKKKCNKILSCGKHRCTILCCNAQDHICDRICNGLLNCRQHRCDRMCHTGSCNTCYISSYEALYCHCGNTYIPPPVRCGTRRPPCSLPCSREHECGHPATHVCHDEDQCPPCIALTEKLCYGGHELRFAIPCHIKNVSCGMPCGNLLPCKLHKCIKPCHPAPCDSKPCQLPCNLLKTECGHPCSKPCHTGPCPVKSCRIMVNVSCPCGNITETRLCSDPKVNEYRLQLQTQSMSFLDNIVVSKSTIKTFKILECTSECTKIERNRRIALALQIRNPDLSPNVTPRYSDFMKDFAKKDASFCNYIHEKLAELVTNAKQSKQNSRSHSFEVMKYEKRKLVHEYCEHFGCESVAYDSEPNRNVVATALRDKSWLPNYSVVEVLQREGGCPRVNPFSSIQKRNMVILNKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -