Basic Information

Insect: Daktulosphaira vitifoliae
Gene Symbol: -
Assembly: None
Location: scaffold178:97340-105940[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.86 1.2e+02 3.9 1.5 2 23 168 187 167 187 0.79

2 18 0.0079 1.1 10.3 0.3 1 23 198 221 198 221 0.94

3 18 2.2 3.1e+02 2.6 0.2 2 23 229 253 228 253 0.72

4 18 0.35 49 5.1 0.5 2 23 294 316 293 316 0.94

5 18 0.015 2.1 9.4 1.2 1 20 328 347 328 349 0.94

6 18 0.094 13 6.9 0.8 2 23 355 376 355 376 0.85

7 18 6 8.3e+02 1.3 0.1 2 23 387 409 386 409 0.88

8 18 6.6e-05 0.0091 16.9 0.6 2 23 416 437 416 437 0.97

9 18 0.00014 0.02 15.8 1.7 1 23 443 465 443 465 0.97

10 18 0.00019 0.027 15.4 2.4 1 23 471 493 471 493 0.98

11 18 3 4.2e+02 2.2 0.6 2 23 505 527 504 527 0.93

12 18 0.0023 0.31 12.0 0.7 2 23 543 565 542 565 0.93

13 18 0.0059 0.82 10.7 1.5 1 23 574 596 574 596 0.97

14 18 9.3 1.3e+03 0.7 10.6 1 23 625 648 625 648 0.95

15 18 0.002 0.27 12.2 1.4 2 23 656 678 655 678 0.97

16 18 0.0094 1.3 10.1 3.2 1 23 692 715 692 715 0.95

17 18 0.00017 0.024 15.5 0.8 1 23 727 749 727 749 0.96

18 18 0.9 1.3e+02 3.8 0.1 2 23 786 807 785 807 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.86	1.2e+02	3.9	1.5	2	23	168	187	167	187	0.79
2	18	0.0079	1.1	10.3	0.3	1	23	198	221	198	221	0.94
3	18	2.2	3.1e+02	2.6	0.2	2	23	229	253	228	253	0.72
4	18	0.35	49	5.1	0.5	2	23	294	316	293	316	0.94
5	18	0.015	2.1	9.4	1.2	1	20	328	347	328	349	0.94
6	18	0.094	13	6.9	0.8	2	23	355	376	355	376	0.85
7	18	6	8.3e+02	1.3	0.1	2	23	387	409	386	409	0.88
8	18	6.6e-05	0.0091	16.9	0.6	2	23	416	437	416	437	0.97
9	18	0.00014	0.02	15.8	1.7	1	23	443	465	443	465	0.97
10	18	0.00019	0.027	15.4	2.4	1	23	471	493	471	493	0.98
11	18	3	4.2e+02	2.2	0.6	2	23	505	527	504	527	0.93
12	18	0.0023	0.31	12.0	0.7	2	23	543	565	542	565	0.93
13	18	0.0059	0.82	10.7	1.5	1	23	574	596	574	596	0.97
14	18	9.3	1.3e+03	0.7	10.6	1	23	625	648	625	648	0.95
15	18	0.002	0.27	12.2	1.4	2	23	656	678	655	678	0.97
16	18	0.0094	1.3	10.1	3.2	1	23	692	715	692	715	0.95
17	18	0.00017	0.024	15.5	0.8	1	23	727	749	727	749	0.96
18	18	0.9	1.3e+02	3.8	0.1	2	23	786	807	785	807	0.94

Sequence Information

Coding Sequence: ATGTATGGATTGGATATTGTACCAAATCCCTTTAGTCGAACCAAGAACGTGTTTTTTGAAAAAATTCATTATGCTACTGCAAACAATGGACAAAAAGTGGTTATTTTACCAACAGTATTAGTATCAAAAAACAAAAATTCACGCATTGATAAAGTCCGACGGTCCCGTCGGAGAAAAAACCAAAAATTCAAAACAATTAAGTGTCCTATAGACGCCAGTCGACAAAAAGTATTTTATATAAAATCAAACGGTGGATATAAAAATGCGATAATTAAGAAAAATACCGATGATTTAAAAACTCAAGTAACAGACGATGTTGACGTACAAGAATCGAAAAAAGGTAGACCTAAAGGTTCTAAAAATAAGAATAAATTTGATCCAATTGGATATGGCCTCACAGACAAATCATTTGTATATTCTGTGGACTTGAATACGTGTGTCGTTTGTAACGAGTCATTGGACACTGATCTATTAGATCACGCACTAGAACATCACAAAGACACTTGTCCAATTTGTGGTGAATATTGCAGTCAAAATTTGTCGAAACATTTTGAGTCGCATGCAAAACAAACTTATTTGAAAGTTAAGTGCTACGAATGTTATCATTGCAAAGAAAAGTATGGCAACTCTGAATTATTGGCAGACCATGTACTCGAAGTGCATGTAAAAAAGGCTACCCAATTAACGTGCTGCATCTGCGGACAGATAATATCACGGAATACGTTAGTAGCTTTGCGACAACACATATCCGTAGCGCATTCGGACGCAAATCCGTCCACGTTTCCAGAAACCTGTGGATATTGTAACCATCAGCCAGGTCGTAACGATCTTATAGCCCATTTATTTGACAAACATCTTTCTAAGACTTCAGTCACTATGTCATGTACGATTTGTGAAGCACAGTGCGATAGCCGCTCGGATATTGTCGATCATATGGTCCGTACACACTGTTCCAGTACAACTTACAGGCGACCAGCAGTTTATCGCTGCCCAGCGTGTCACATAGGATTCAAAACTCAAACCAGTGTGCTGAGACACGCGTGTAGTGCCATTAAGAACCCGTACTGCGAAAATTGTGATAAAATGTTTCCGTCAAAAATGAGGCTTGCTTTTCACTTGCAATTTCACGATCATGTATTTTATCCTGCGATGCACTTACGTTGTGACGTATGCTTAGTTGAAATGGAAGATGAATATCAGTTGTATGATCATATTCGATTCCAACATGAAGTATGCGAAAAGGCGGTCTGTGAAACATGTGGTCGCATGTTCAAAACGTCTATGGGTCTGAGTATTCATCGCCGGTATCACGTCGGTGACAGACATTACACGTGCAAGACTTGTGATAAATCATTCTTAAATCGTTCAACGCTTAAAGAGCATGAAATATCGCACATGGAAGTCAAACCTTTCCGTTGCCATATTTGTGGTCAATATTTGAGTCGAGCGTCGCGTTTGCGATCACATGTAAAATCTCACAAAGCTGCTGAATCGACATCACAACGTTGCTGCTATTGTTTGACATGTGGTTTTGTAGCTCCAAACACATATTTAATTAGCGATCACATGAGCAAAGAACACGACTTCGAAGGTGAGGCTAGGACTGCGGATTTGTCCTTAATTGTAAAGTGCGAGTACTGCGATTCTACATACATCGACTCAACTAGCTTAAATCAACACCGAGATAATAAGCACCCAAAAAGCGAAAACTCTGATGCTTTTGCTTGTGCTTTATGTTCTTCTACTTTTAGCACATATTCCAGACTGACAACTCACAAACTTACTCATGGCATAAACACCGAGTCTACATTATTGGATACTCAGTTCAATGATGTTAATGTTGATCAGGATCGATTTTGTATACCACAATTCTTTTCGTGCGAACATTGTGGTAAAATGTGTCTTCATTACACTTACTTATGTCTACATAGAAAACTTAAACACTCTAAAAAAACCGAACAAGTTAAATGTAGCCGATGTCCTCAAGAATTCAAATCGTCTTGGAAACTTATATACCATAAAAAAACAACGCATGGCCTCAGCCCAAACCAAGAAACCCATTCAGAAGATGTTCACCAATGTAAAATCTGCTTTCGAAAGTTCAGCAAGGTTGGCGCTCTTAATTTACACAAAACCCGTAGTCATATTGACAATAGTACCAGTGTTAATGCCGGAAAATATTTATGTGATCAATGTGGAAAATCACTTAATAGTGAACGTTCATTGATTAACCATAAAAAAACCCACTCCCGTCATATACCATGTCTTGAGAACAAACAACCAACTACACCTATCATTACTGAAACGAAACCACAAGAAAAAAATGAAGATAATATTACTATTTATAATCAGATCTCATGCCCTATTTGTCTACATTTATTTGACGATAATTTAGAATACATCGAACACCTTGAAAACCATACTAAAGTAGAAAACATTGTTCCCACTAACACGATTTGCATTTTGTGCGATACAGATTTATTGGATACTCAAATGTTCAAGTATCATATCGAAAAACATTCAGTTAATAAAGAAGCTATAGTTTGCTACATTTGTTATGCACCATTCCATTCATGTCAAGGATTTCTTTTACATGTAGGAAATGTGCATCAAATGTTCAAACTGTTATCAGAGGAACACATTTTACCTGAAATATCATTTGTGGGTATGTCTCAAAGAAACTTATTAAATAATGAACCATTAGTCGTTGATTGTTCACAAGTATTAGACAATCAAAATCCTGTGGAATTATTGGTACCTATTGTTACGAAAGATATAAATAATCAAAATTTAATACGTGAACCTTCCCCAAACTCGGCAATACTTTTTTCGACCACTGATGAACACACGTTACATCAAGAAAATGCATCAAACCCACCGGAAAATTTTGAATTTAATTATCCATCAAGTTCAAATAATGTCTATGAACAAAATGCTACACAAGATAATTGTTTAGAATATTTACCTGTATCAACAATAAATATTAAGAAAGAAAATATTTATCCAAAAAATGTACTAGAAAACAATGATAACATCAATTTTGACCAATTATTAAAAGTATCCGAACACGAAAAACAAATTAACGAACCAAATCCAACTTTAGACGAATTATTGGATCTTATTCCTTTAACTCCTCAGCGTGTTCAAGATAATTCATACTTGAATATTACAGAAGAAACTCGAGATCAAATGTTCTTCTTAAATAATTTACTTGATGAAAAACCTTCGGATTGTGCAACACAATAA
Protein Sequence: MYGLDIVPNPFSRTKNVFFEKIHYATANNGQKVVILPTVLVSKNKNSRIDKVRRSRRRKNQKFKTIKCPIDASRQKVFYIKSNGGYKNAIIKKNTDDLKTQVTDDVDVQESKKGRPKGSKNKNKFDPIGYGLTDKSFVYSVDLNTCVVCNESLDTDLLDHALEHHKDTCPICGEYCSQNLSKHFESHAKQTYLKVKCYECYHCKEKYGNSELLADHVLEVHVKKATQLTCCICGQIISRNTLVALRQHISVAHSDANPSTFPETCGYCNHQPGRNDLIAHLFDKHLSKTSVTMSCTICEAQCDSRSDIVDHMVRTHCSSTTYRRPAVYRCPACHIGFKTQTSVLRHACSAIKNPYCENCDKMFPSKMRLAFHLQFHDHVFYPAMHLRCDVCLVEMEDEYQLYDHIRFQHEVCEKAVCETCGRMFKTSMGLSIHRRYHVGDRHYTCKTCDKSFLNRSTLKEHEISHMEVKPFRCHICGQYLSRASRLRSHVKSHKAAESTSQRCCYCLTCGFVAPNTYLISDHMSKEHDFEGEARTADLSLIVKCEYCDSTYIDSTSLNQHRDNKHPKSENSDAFACALCSSTFSTYSRLTTHKLTHGINTESTLLDTQFNDVNVDQDRFCIPQFFSCEHCGKMCLHYTYLCLHRKLKHSKKTEQVKCSRCPQEFKSSWKLIYHKKTTHGLSPNQETHSEDVHQCKICFRKFSKVGALNLHKTRSHIDNSTSVNAGKYLCDQCGKSLNSERSLINHKKTHSRHIPCLENKQPTTPIITETKPQEKNEDNITIYNQISCPICLHLFDDNLEYIEHLENHTKVENIVPTNTICILCDTDLLDTQMFKYHIEKHSVNKEAIVCYICYAPFHSCQGFLLHVGNVHQMFKLLSEEHILPEISFVGMSQRNLLNNEPLVVDCSQVLDNQNPVELLVPIVTKDINNQNLIREPSPNSAILFSTTDEHTLHQENASNPPENFEFNYPSSSNNVYEQNATQDNCLEYLPVSTINIKKENIYPKNVLENNDNINFDQLLKVSEHEKQINEPNPTLDELLDLIPLTPQRVQDNSYLNITEETRDQMFFLNNLLDEKPSDCATQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -