Basic Information

Insect: Daktulosphaira vitifoliae
Gene Symbol: -
Assembly: None
Location: scaffold99:389501-395197[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.12 17 6.6 2.6 2 23 192 213 191 213 0.94

2 22 3.5 4.8e+02 2.0 1.2 1 23 217 240 217 240 0.91

3 22 0.0072 1 10.5 0.1 1 20 246 265 246 267 0.94

4 22 0.00044 0.061 14.3 5.8 1 23 299 322 299 322 0.97

5 22 3e-05 0.0041 18.0 1.5 1 23 328 350 328 350 0.98

6 22 1.3e-05 0.0018 19.1 2.3 2 23 379 401 378 401 0.92

7 22 0.00075 0.1 13.5 3.5 1 23 407 429 407 429 0.97

8 22 0.00036 0.05 14.5 1.5 1 20 474 493 474 495 0.95

9 22 0.079 11 7.2 6.7 1 20 502 521 502 524 0.94

10 22 0.0012 0.16 12.9 0.2 1 23 660 682 660 682 0.97

11 22 0.0021 0.3 12.1 1.6 3 23 687 708 686 708 0.96

12 22 0.0017 0.24 12.4 5.6 1 23 714 737 714 737 0.90

13 22 0.004 0.55 11.3 5.2 1 23 743 765 743 766 0.96

14 22 2.5e-05 0.0034 18.2 1.7 1 23 774 796 774 796 0.97

15 22 7.2e-05 0.01 16.8 0.3 2 23 802 823 801 823 0.97

16 22 0.0012 0.17 12.9 1.7 1 23 829 851 829 851 0.99

17 22 8.2e-05 0.011 16.6 1.3 3 23 858 879 856 879 0.94

18 22 0.0032 0.45 11.6 1.6 1 23 886 908 886 908 0.92

19 22 7.1e-06 0.00098 19.9 1.5 1 23 914 936 914 936 0.98

20 22 5.1e-07 7.1e-05 23.5 1.2 1 23 942 965 942 965 0.96

21 22 8.6e-05 0.012 16.5 0.2 3 23 970 990 969 990 0.98

22 22 0.44 61 4.8 3.3 1 23 996 1020 996 1020 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.12	17	6.6	2.6	2	23	192	213	191	213	0.94
2	22	3.5	4.8e+02	2.0	1.2	1	23	217	240	217	240	0.91
3	22	0.0072	1	10.5	0.1	1	20	246	265	246	267	0.94
4	22	0.00044	0.061	14.3	5.8	1	23	299	322	299	322	0.97
5	22	3e-05	0.0041	18.0	1.5	1	23	328	350	328	350	0.98
6	22	1.3e-05	0.0018	19.1	2.3	2	23	379	401	378	401	0.92
7	22	0.00075	0.1	13.5	3.5	1	23	407	429	407	429	0.97
8	22	0.00036	0.05	14.5	1.5	1	20	474	493	474	495	0.95
9	22	0.079	11	7.2	6.7	1	20	502	521	502	524	0.94
10	22	0.0012	0.16	12.9	0.2	1	23	660	682	660	682	0.97
11	22	0.0021	0.3	12.1	1.6	3	23	687	708	686	708	0.96
12	22	0.0017	0.24	12.4	5.6	1	23	714	737	714	737	0.90
13	22	0.004	0.55	11.3	5.2	1	23	743	765	743	766	0.96
14	22	2.5e-05	0.0034	18.2	1.7	1	23	774	796	774	796	0.97
15	22	7.2e-05	0.01	16.8	0.3	2	23	802	823	801	823	0.97
16	22	0.0012	0.17	12.9	1.7	1	23	829	851	829	851	0.99
17	22	8.2e-05	0.011	16.6	1.3	3	23	858	879	856	879	0.94
18	22	0.0032	0.45	11.6	1.6	1	23	886	908	886	908	0.92
19	22	7.1e-06	0.00098	19.9	1.5	1	23	914	936	914	936	0.98
20	22	5.1e-07	7.1e-05	23.5	1.2	1	23	942	965	942	965	0.96
21	22	8.6e-05	0.012	16.5	0.2	3	23	970	990	969	990	0.98
22	22	0.44	61	4.8	3.3	1	23	996	1020	996	1020	0.95

Sequence Information

Coding Sequence: ATGTATTCTCAATTTTGCAATTCTAAAAGTGATTATTTTGACTCTTATGTCTTGCTCGAAAAATTAACACCGGAAATTACTGAAAAATATAAAAGACAAGATAATGTAAATATTCAAAATGGAAGATCTTATGATAAAACTTTTGATAGTCCTGATTTACAAAAACAATTCACACCAGATCTTATTAATACATTTAATTCTCAATGTTCTTCAAGTGAACTATATGAACCTCAGTCGCAAAATTTAAATACATCAGTTGACCTGCATGAAAAATTAGAAATTAATGAAAAAAATTGTTTGGTAGTAGAAAACGATAATGAAAAAGGTTGTTGGAATATATCTGGCTCTGATATTTTAAAACTAGAATGTGAATTAGATAACAAAAGTTTTGTTTTTGATGCACTGTCAAGTCAACCCTTTTCATCATTTGACTCTAGTGGTATAGAATATTATGAAACTTTATCTGAGAGAAGTATCAATTTCAACCAACAAAACAATTGTAATGAATTATTTTTTACTTCTACTATAAATAAAAACTGTGATCTTTTGTTACAAGTTGAAGAGATACAGTTAATTTGTCATTTCTGTGGCAAATTTTATAAAGATGATAAAATATTTGCAAAACATGTCAAAAAACACAATTTAAGGTTTGATTGCATTCATTGTTCTGAATTATTTAGCGATAGATTATCTATGTTGTTACATATAAAAAATTCTCATAAAATTACTATGTTGTATAATTGTAACATATGCTTAGAAGAATTCACTACCTTAAAATATCTAGAAGATCATACAGCTTCATGTGTTTTTTCTTCATCTATGAAAACAACAAATGTTAGTAATAAAACAAATATTAAAAATATAATGAAATTAAAATTAAATCGTTTAAACTGTTTTAAATGCGATCATTGTGAGAAGTGTTTCCAAAAAAAAATTAGTTTAGCAAATCATTTAAAAATATTCCATAATGCATCATCAACTTTTCAATGCAGCTATTGTAATAAAATAATAAGAAGTAAAAAGGACTTGATTAATCACATAAAGTATCATCTAATTAAAATAGTAAAAAATTCAATTGATAAAAAAGTTGATATAAAAAAAAATATATATACACATAAAAATTTATGTTTTATCAGATGTAAAATTTGCAAAAAAAGTTTCAATAGTAAGAAAAATCTTATTAAACATAATGCGAAGAACCATATGGAAAAAAAAATTTTTGAATGTCATTTTTGTAACAAAAAATTTAGGAATAAATTATCTATAGTTAATCATATAAATTTACATTTGGTTGAACAAAGTTCAAGGAATGAATGTAGACAAAGAGATCTAGAAGAGAGTGTATTTAAATATAATCATAAAGAAGAAACTAAATATCTAGATCAAGTACTTACTGTACCATCTGATAAAAGTTTACGTTATAAGTGTGATTTTTGTTCTAAAGAATTTAAACAACTAATTAATTTTCAAAAACATACTTTACTAGATAATGAAAATAATTCATATGATTGTAATTACTGCAATAAGAAAATAAAACTTAAAAGTTGTCTAAAAAAACATATAGAATGCCATTTGGAAAAAATTTGTTTACATACTGAATTATTTACAAATACATCAAATAATTTATCAAACATGCTTTGTTATACTTGTGGGGAACAAATTCCATCAAAACATAATAGCCTAACATCAAATAATAGAATCATGGATTCCATTGATCACCAGAATTTTGTGCAAGAAAAACAATCTGACAATAATCAAGTATTTAACCAGTATTCTTTCCCAAATTATAGATCTGAAAAAGAAAATTTAAATATAAACTTGGTAAATCCAGAAATTGATATTCGTTCAAAATTTAATCTGTCGTACCATGAAAATACTAATGAAATATCAAAAGATTTAATTATTGACCCCAAGAATAAACCTTTCATTCATTCAAAAATATTTAATTTTCATCAAGTTGGTAATTCAAACTTAAAGTTTTCTTGTGTTAAATGTGACATATCATTTTCAAACTATGATATTTTAATAGAACATATGGAAAGCCATGAGAAAAACTTCTGTGTTATTTGTGATAGATCATTTCTTAATAAAATAAATTACAGAAAACATATGCAAAATAAACACATAAATGTTATACAACATCCGTGTAACCAATGTAACAAATTTTTTTCAACTTATGGTTCATTAAAAAAGCATTGTAAAGTAGTGCATGAAAAAATTTATGAGTTTGAATGTAATTACTGTAATAAAAAAATGGGCCATAAAAGTCAATTAAAAGGTCATATATCTAGACATCATCATAATGAAACTGGGGAGCGTCATTCATGCAATATTTGTGCCAAAATTTTTTTTACTCGTTCTAACTTATTAAAGCATCAAATTATTCATTCACAAAAAAGAATGGTTTGTTATATTTGTGGAAAATCTTATAGTGGTACGAGAAGTTTTGAAATTCATATGAAAATGCATATTAATCCAGATAAGTACAAGTGCCAAATTTGTGAGCGCCCATGCTTAAATAAAATAAATTTATCAAAACATATATTAACCCATTCGGGATGTATAATAAATTGTAATATCTGTGATAGACCATTTAAAAGTACTCATACATTAAAAAATCATTTAGATTCTGTTCACGGCCAAAAGGATAAAAATTTTTTATGTGACCAATGTCCTAAATCCTTTAATAATAAACAAAAATTACAATTTCATACACTTGTACATACAGGCCAAAAACAATTTGTTTGCAAAACATGTGGTAAGAAGTTTGCTAGAATTTACACTCTAAATATGCATAAACGTGTACATACTGGAGAGAAACCATACAGATGTATTGAGTGTAATAAATCATTTTCAAGACCATCTAACTTTAAAGTACATATGAAAATGGAACATTATGGACGCATATGTGATATATGTGAACAAAAGTTTGACCGTTCAGTTGATTTAATTCAACATGAACGTACTCATAAAAAGGACAACAAATTTTTTTGTTATGTTTGTGACATTGAGTCATATTATTTTAAAAAAGATTTAAAAAATCATATTCTAAAATGTCACAAAAATTTATAA
Protein Sequence: MYSQFCNSKSDYFDSYVLLEKLTPEITEKYKRQDNVNIQNGRSYDKTFDSPDLQKQFTPDLINTFNSQCSSSELYEPQSQNLNTSVDLHEKLEINEKNCLVVENDNEKGCWNISGSDILKLECELDNKSFVFDALSSQPFSSFDSSGIEYYETLSERSINFNQQNNCNELFFTSTINKNCDLLLQVEEIQLICHFCGKFYKDDKIFAKHVKKHNLRFDCIHCSELFSDRLSMLLHIKNSHKITMLYNCNICLEEFTTLKYLEDHTASCVFSSSMKTTNVSNKTNIKNIMKLKLNRLNCFKCDHCEKCFQKKISLANHLKIFHNASSTFQCSYCNKIIRSKKDLINHIKYHLIKIVKNSIDKKVDIKKNIYTHKNLCFIRCKICKKSFNSKKNLIKHNAKNHMEKKIFECHFCNKKFRNKLSIVNHINLHLVEQSSRNECRQRDLEESVFKYNHKEETKYLDQVLTVPSDKSLRYKCDFCSKEFKQLINFQKHTLLDNENNSYDCNYCNKKIKLKSCLKKHIECHLEKICLHTELFTNTSNNLSNMLCYTCGEQIPSKHNSLTSNNRIMDSIDHQNFVQEKQSDNNQVFNQYSFPNYRSEKENLNINLVNPEIDIRSKFNLSYHENTNEISKDLIIDPKNKPFIHSKIFNFHQVGNSNLKFSCVKCDISFSNYDILIEHMESHEKNFCVICDRSFLNKINYRKHMQNKHINVIQHPCNQCNKFFSTYGSLKKHCKVVHEKIYEFECNYCNKKMGHKSQLKGHISRHHHNETGERHSCNICAKIFFTRSNLLKHQIIHSQKRMVCYICGKSYSGTRSFEIHMKMHINPDKYKCQICERPCLNKINLSKHILTHSGCIINCNICDRPFKSTHTLKNHLDSVHGQKDKNFLCDQCPKSFNNKQKLQFHTLVHTGQKQFVCKTCGKKFARIYTLNMHKRVHTGEKPYRCIECNKSFSRPSNFKVHMKMEHYGRICDICEQKFDRSVDLIQHERTHKKDNKFFCYVCDIESYYFKKDLKNHILKCHKNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -