Dvit015883.1
Basic Information
- Insect
- Daktulosphaira vitifoliae
- Gene Symbol
- bab2
- Assembly
- None
- Location
- scaffold25:668084-680927[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.6e-12 2e-08 34.3 0.0 2 38 428 465 427 470 0.89 2 4 3e-12 1.1e-08 35.1 0.0 2 39 482 519 481 522 0.94 3 4 3.8e-17 1.4e-13 50.8 0.0 3 45 538 581 536 581 0.97 4 4 1.5e-17 5.4e-14 52.1 0.0 1 42 588 630 588 632 0.95
Sequence Information
- Coding Sequence
- ATGTCAACAAATGGCCAACATTACTGCCTACGTTGGAATAATTATCAATCAAATATGACATCAGTATTTCATCAACTACTCCGTAATGAATCATTTGTTGATGTTACTTTAGCATGTAATGAAAGTACTCTTAAAGCACACAAAGTTGTTTTATCAGCATGTTCTTCATATTTTCAAAAATTGTTAATGGATAATCCATGTAAGCATCCTACAATTATATTACCATATGATATATGCTTCAGTGATTTGAAATTCATCATAGAATTTGTATACAGAGGTGAAATAGATGTTTCTCAAGCTGAGCTCCAATCTCTTTTGAGAACAGCTGACCAATTAAAAATAAGAGGTTTATGTGAAGTCCCTGAAGATGAACGTGATTCTTCAATTACTGCTGAAGTAACACCTCTTGGACCTTTAAAGACAGGTGGACGTGTTTTTACAAAGCTTCAAAGAAGAACATCTCCATACATAAAAAAATTAAGTCCGAACACTACTGGATGTTTTCAATCTGAACAATATAGTCGAAATTTTTATAGAATCGAACAAACTGGTTTTGCTCCTATTTGTATTAATCAAGAAAACAAAACAATTAATTCCTCCCACTGTATGACTGTGGCAACTTCTACAGAAGAAGATGAAAAAGAAATAAAATCAACCCTCTCAGATTTACCTGTAGTTATATTAGATCCTCATTCGACTTTAAATGTACAAGCACATCAGCCTCAAATAGTACATATGAATATGCCATCACAACAAACACAAATTAATCATGAAGTAACGCAACATCAAAATTCACCTCAGTTACAGCAATCTTCTGTTCAAACTCACACACAAATGATTATTACATCAACACCAATTATGACTGTTTCTGAAAGTGATATTACACCAGATGGTCAGCCAGTTGGGCCAAGAGCTACACCTGTACCAGTTAAACCAAATTCTAGTCCATCAACTACTCCAACACATCGTGATATGGCAGTGGGTACATCTAGTTCTAACGACACTGCTAATGATGCAACTGATGTAAAATATGAAAGTGTTAAGTTTGAAACATTACGTACAATTGATCAAACATCTGATGCTATTGGAATAGATAGACAACAAGCTAGAGAATGTATTACTAATATGAACGAGGAAGAAAGTTCTATGCATACAATGATGATAACACCAGAGTTATTAGGATTATTGCCTAGTTCATCTAACACAGGAGATGTCAGTGATGAAAACTCAAGTAGTAATATGAATAAGCAATATGGTACAACTAATGGAAAAGGTTGGACTACTGAAGATATGGAAAATGCCTTAGAAGCTTTACGTTCACACAATATGTCTCTTACTAAAGCATCAATAACATTTGGAATCCCATCTACAACTCTGTGGCAACGAGCACATCGAGCTGGCATCGACACTCCTAAAAAAGATGGACCAGCTAAGTCATGGAATGATGATGCTTTAAATGTTGCTTTAGATGCTTTGCGTACAGGCACTATATCAGCCAATAAAGCCAGTAAAGCTTATGGTATACCTAGCAGTACATTATATAAAATAGCCAGAAGAGAAGGTATTCGTTTGGCAGCTCCTTTTAATGCAGCTCCAACATCCTGGGGACAAGAACAATTAGATCAAGCATTACATGCTATTCGAACTGGTCAAACAACTGTTCAAAAAGCAGCAGCTGACTATGGAATTCCATCTGGTACTTTGTATGGCAGGTGTAAACGCGAAAAAATTGAACTTTCTCGTAGTAATCCTACTCCTTGGTCAGAAGATGCTATGATGGAAGCTCTTGAGTCTGTACGTTTGGGTCAAATGAGTATAAATCAAGCTGCAATTCATTACAATCTACCATATTCTTCATTATATGGCCGGTTTAAAAGAATTAAGTATGGTGCTGATCATCCAGATGATGATTGTGATGTTATGGATGATTCGGATACACAAAATGAACATCATCAACAACATCAGCAGCAACATCAACATCAACAGCATCAACAGCAACAGCAACATCAGCATCAGCATCAGCATCAACAACAACAGCAACAGCAGGTTACTCAACAAGTTCAAGCTACTCCAATGTCGCAGATAATGTTGGTACAATATCCAGCACCAACTCAAATTCAAATGTATCAACAGCATCCTACTCATTCATCAACCAGTTGA
- Protein Sequence
- MSTNGQHYCLRWNNYQSNMTSVFHQLLRNESFVDVTLACNESTLKAHKVVLSACSSYFQKLLMDNPCKHPTIILPYDICFSDLKFIIEFVYRGEIDVSQAELQSLLRTADQLKIRGLCEVPEDERDSSITAEVTPLGPLKTGGRVFTKLQRRTSPYIKKLSPNTTGCFQSEQYSRNFYRIEQTGFAPICINQENKTINSSHCMTVATSTEEDEKEIKSTLSDLPVVILDPHSTLNVQAHQPQIVHMNMPSQQTQINHEVTQHQNSPQLQQSSVQTHTQMIITSTPIMTVSESDITPDGQPVGPRATPVPVKPNSSPSTTPTHRDMAVGTSSSNDTANDATDVKYESVKFETLRTIDQTSDAIGIDRQQARECITNMNEEESSMHTMMITPELLGLLPSSSNTGDVSDENSSSNMNKQYGTTNGKGWTTEDMENALEALRSHNMSLTKASITFGIPSTTLWQRAHRAGIDTPKKDGPAKSWNDDALNVALDALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTSWGQEQLDQALHAIRTGQTTVQKAAADYGIPSGTLYGRCKREKIELSRSNPTPWSEDAMMEALESVRLGQMSINQAAIHYNLPYSSLYGRFKRIKYGADHPDDDCDVMDDSDTQNEHHQQHQQQHQHQQHQQQQQHQHQHQHQQQQQQQVTQQVQATPMSQIMLVQYPAPTQIQMYQQHPTHSSTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00184731;
- 90% Identity
- iTF_00418404;
- 80% Identity
- iTF_00418404;