Basic Information

Gene Symbol
Arid4b
Assembly
None
Location
scaffold189:151597-184113[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.6e-27 2.4e-23 82.8 0.5 1 89 299 381 299 381 0.95
2 2 4.5 1.6e+04 -3.2 0.2 61 88 1513 1538 1502 1539 0.65

Sequence Information

Coding Sequence
ATGTTTTTATATAATGTGCATTTAGATGAGCCACCATTTCTTACTGTTGGTACAGAAGTCAGTGCTAAATATAAAGGAGCATTTTGTGAAGCAAAAATACGGAAAATCTCCAAATCAGTTAAATGCAAAGTTCAATATACTAACGGATTGGTTGCAATAGTTCCTGATGAATTAATAAAGGGGCAAATTAAGATTGGAGCGAATATTGAAATCAAATGTAATGATAAAAAAGAACTACTAGAAGGAACAATTCAAAAGATTCAGGATCATAGTCAATATACTGTTGTGTTTGATGATGGTGATATAACTTCTTTGAAGAGATCTGCATTATGCTTAAAAAGTGGAAAACATTTTGCTGCTAGTGCAACCCTTGACCAACTTCCTCTTACTCATCCTGAGCACATTGGTACTCCAACTCGAAATAGTATTGTTTATGGAAGAAGAAGTAGAAAACATATTAAAAGTGTTGGGGAAAGTGAAGAGGAAGAAAATATAGAAATGGAAGAAAAAGATATTGGGAAAGTTGTTTGTGTTGAAGCTAATGATAAAAAAAAAATAAGAGACAATTGGTTTCCAGGTTTAGTAGTAGCACCTACAGCACAATCTGCAGTCAAAACAAATGTATTAGAAGATTACTTGGTTCGTTCTTTTAAAGATGGAAAATATTATACAGTTCCAAAAAAAGAAATCACAGAATTTACAAAAGAAATTGCTGCTAAAGTGGAAAATCCTACTTTGAAGACTGCTGTTGAAAAAGCAATATTATATCTTGATAAAGATGAATTACCTCCTCACTGGGACCGAGATCTATTATTTGGAATTGAAAAGAATTGTATTACAACAGATAGTGAAGGCGCCTCTGATAGTGATAACTCTGATGAAGAATCTATTGAGGAGAAAGATCATTTTGTGGCACAATTATTTAAATTTATGGATGATAGGGGTACACCTTTAAATCAAGCACCCATGATAAATGAAAAAGATGTTGATTTGTATAAATTATTTAAGGTTGTTAATAATCTTGGCGGCTTTAATAAGGTAGGTAAATGTAAACAATGGAAAACAGTTGCACAGAAAATCGGCCATGAGCAGTCTGTCTTTTCTGTCAAACAAGCTTATCAACAGTATTTGCATAGCTTTGAGGATTTTTATCGAAAACTTGGGTGTACTATGTTGAGCCATCCTAGAGGAGTAAGATCTCGCAGTAGATTTAGTCGTAGTATTATACGTGATGTTGATAAAGCATTACCTGGAACATCACTTAGCAGTGCCGAAAAAAACAAACAATTTAGCTCTTATGTTAAAATTGAATCAAATGAAAAAAAAGATAAAGATAAAGATGAAGTCATTAAAGAAGTAGATGCCTCAAAAGAAATATTGATATCTAAAAAGTCATTAAAAATATTTAAAGCAGATGAAAAAGTTACAACATTGAAAAATGATGATATTACCAAAAAAATTGAAAAAAAGAAGGACAAACCAGAAGTAGTTTTAAAAGATTCAGAAGTTTCTAAAGAAGGTGTAACATTAAAAAAATCTTGTAAATTGTTGAAAACAGATGAAAAAATTGCATCAATTAAAACTAATGAAGAGTCAGGTAAAAAATTAGATAAAAAGAAGGAAAAAACTGAATTCCCTATTAAAGATCTGGAAACATTAAAAGAATTCGGAATATCAAAAAAATCTTGTAAAATGATAAAAGTAGAAGATGTTAATAATTCACGACCTAAAACGTCCACAAAATGGGACACTGAAATTGAAGACTTAAAAGAGTCTCCTAAAGATATCAAAGTTAAAAAAGAAGTTAAAGAAACTACAACTCAAAAAGATATAAAAAAGGAAGAAGAAAACATTGAAATTCTTGATTTAAATGAAGATGAAAGTGAAACATCTGAAGATAAAAAAAGTGAAAAGAAAAAATATTCAAGGAATCTTTTTGGAAAGTCAATTCGACGAAATAGCAAAAAAGAAAAAGTTGAAAGGATCAAACCAACAGAAACTGGATTGTCTGGTGTAAGAAAAATGAGATCTATTAAAGAACAAATAAAAACATTTGTTAAAGGTATGACACCATCATTTAAAAAACCTAAAAGAGGTGCTTCTACCAGCCAATCGGATTCTACTTCACAATCAAAACAAGATGACGAGTTTCCTAAAGTTACACGTTCAAAGTCTAAAGATGAGTTACCCCCAAGATTACGAAAATTATCAGTACTTAATAATGAAACACAACGTATACAACTTCCGGTTTTATCATGTGCATCACCTTCTGAAAATTTAAATAAAATTAAAAAATCTGATGAAGGACTAGAAAAGAGAAAAAATATAAAAAAGAAAAAAGATGATAAAGATGACAAAACTTTATCAACTGAATCAAATATTCAGCCTATGAATAGCGAGATAGATTCATGTGACAAAGATACACCTATAGCAGTTGGAGATGATTTAGTAGTCTATTATGGTGACAAACATGCCACTACTTATGATGCTAAAGTACTGAATGTGTGTGACATTGAAGGTGCTAAAAAATTTTATGTCCATTACAAAGGATGGAATTCTAGGTATGATGAATGGATAGATGTAACACGAATAGCTTTATTAAAGTCTAAAATATTGGAACCTGAACTAGATCTTGATCCAGATGGTGATGATGGAACGAAAAGTGATTATAAAGGAAGTGATATGAAAAAACTGCCACCAATAAATAATAGGACTAGAAGATCAGTAACTCCAAGCATGCCTTATTCTAGTCGAAAAAAATCTCCATTTAGTAATGTACGACCAACTAGAACATGTACACTAAATGATAGACCCTTATCTTCAATTGGAAAATATACATTAAGAGATAATTCTGATTCTGAGAGTGAATATTCTGGGAACTTAGGATTGGCAAAACAATACAACAAAAGAAACCTTCAACCACCAAAATTATCTAGACCAGATTTTGATGATTCAATAAAACTTGAAACTTCTGAAACAGTTAATCAAAAAGTATCACCAGACTCGGATACACAAAAAAAATCTCCTTATCCAAAAACATATCCAGGAAAAGAAGAGCTTCTGCAACGTTCTGCCCCAAGAATACCTAAGTCATGTGTTTTTAAAGTTCATAGTAATAAATCTGAAGAAATAGAAATATGTGAACAAGTAACATTAAAACCACCATTTGAATATAACTATGAAATGTCACAATCAATGAAAAATAAAAATAAAGAAGAGGATGATGATGAAAATGAAAATGATGATGATGTCAATGAAAATGATGAAGATAATGATATTAGTATTGATAATGATGGGACTAGTAAGATTGAAACTAAATCAGCAGTAATTCATTATTTATCACCTAAAGAAAAATCTGAAAAAAATGACTGTCAACATTTACCTGAAATTTCAAATGCAAAAGAGTACAATTTTGCCTTAAAATCTAATATGCAATATTATTCGTCATCTTCTGAAGATGAACAAATACAATTAAAAAATAAAATAATGGAAGATGAAAAAATATCATCCATAAAAAAATTGGAAGATTTCAAAAAATCAGGAACAGACTTTGATCTTAACAAAATACGTTCTGAAATGAAAGGTATTGGGTACATACCATCGTCATCTAATATGAATGTTGAAAATGCGATTAATAGTGATCCTCCTGAATTAAAAGCTGAAGTTGATAGAAATCCAGATGATCTCGATGAACCCGAGGATATTTATGAATTTAAGGATTCTGAATCATCGGATTTCATAGTAATGCCTTCTGTAATCGAAGAAAAAAATCGAAGAATTATTAAACATAATGAACCTCCAAAATTGTATTCTTATGATAAATCAGTTGAAATATCAAATATGCCAGAGTTAACTCCTAAAATGGAAATATTAGAAAAAAATAATGATTATGTTACACCTTTCCAATCTGTTATTTATCCAGCACTACCATTTAAAGATAAAGTTGGTCTAGATTTTAATAAAAAAGAAGATGAAATGGTAGATCACTCATCAAGTCAATCTTGTAATGAAACTAGTGAGTTTGAAAAACTTAATCCATCTGTAATATCACAATCTATAGAAAAACAAACATCAAGTGTAAAGTTGAACACTGAATCCTATCCTGTCAACATTGAAGAATCTCATAAGACAGATGAAGTTTTAGATTTATGCATAAAACCTATTGATAATTCTAATAATAATATTTTTAGTACTAGAGAATCAAATGAAACTGATGATACAGTTGAAGAAGATGATGATGAAGACGAAGATGATGATGATTCAAAGTTGGTAATTGCAGAAAATGATAAGATTGAAGCTGATTGCCACACTGAATCTGATTTAGTAGTAATTGATGAAGAACAAAATTCATCTTCTGAACCAACTAATCGTTTCAAAGTATCAAATTCAATGCAAGATACCGATATAGAATCAAAAAGTTCAGATGAAACTAGGAGAAGTGCATCATTAAAACATGATGAGCATGATGATGAAAGTACAACTTCTTGTAATGAGAACATTCAAGATACACTAGTACATAGCTTTCAAGTTTATACTAATACAGATCATAATCAGAGTAGTAAAACTTCAACTTATCAATTACCTTCTAACTATCAATCTTATACTGATAATTATGATAGTACTAAATCTGGATTTGATATTGAAGAAACAAGTACAAAATCATCAACCACTGAAAGTGCAAAAGATTCTATTTTTAATATTTCAGATGAAATAACTGCATTTAAAGATAAATATTCTGGAATATCTAATGATGAGCGAATAAAAACTGAAAATCAACCAGTAAATCTCACAGGCTTACAAGAATTGCAATGTAGAGAAGAGATAGTGGATGAAGAAACATTAAATAATGCTATTGAAAATAATTACAGTCGTAATACAGATTATAATGTTTATAAACCAAGTACAAGTAAAAGTTTTTTCAATGTAATTAGCAATCCTAATACTGTCAATAGAGAAAATTTCTTAGAAACTAAGTCTTCAAGTGATGAAAAAAGTAATTTCTTTGAGAAACGAGAAACTTGTTTACAGAAAAACAACTCTTATGAAGTAATTAATAATGTATCTGGTAAAAATACAAGCTATGTTTTTGATAACAATACACCCAGTAGTAATAGCAAGGATAGTATGTATGAAATTAGTACTCCAAGTACTAGCAAGGATAATTTTTATAATAATAGTATTCCTAGCTCTAGTAAAAACTTAAGTAACTTGGACACAGATGTAAATAATGTATTGTTTTGTGAAGAAACTATACCAGGTAGTCCAACAGGTACACCTGATGAGCATTCTGATGATCAAGATGAAAGAAAAAAATCATTTTTTGAAGAAAGAGAAGCTGCATCAGCTATGTTTGCCATGAACTTGGCTTTTCGTAAATCAACTATTGCTTCCAGAGAAGCAAAAGATAATAGTAGTCAATCGTTAGAATATAATATTCATCAAAGGGATGAAAATATAGATCAAAGACATTTACAATTTTTAGCAGAAGTTTCAAGTAGAGATGAAGGTGCTTATTTCAATAAGTCAGCTATATCAGAACCTATTGATGAACAAGTTGCAAAATTGGAAAAACCTCAAATTAAACGTAAAATAAGCAGTAATGAAAATTCAATAGGAAAACGTAATAAAATACAATATTCTGCTTCTGAATCAGAAAATGAACGTTATGACCACAATAAAGTACAAATACCTACTAAAGATGGGAAACCTTTAGTCATATTTACTCCTGAAATGGATTCTGCACAACGACAAGCTGTTATTTTGTCTAAAATAAATGAACTAAGAAAAGATTATATCTTGGTTAAAGCTCGAATTGTTGTTGTCGATCGAAGGAGGAAAAAAATAAGAAAACGTAAGAGAGAAATGGCAAAACTTAATTCAACCAATTCAAACAAACGATTGCCAGAAAATTCTACTAATAAGTAA
Protein Sequence
MFLYNVHLDEPPFLTVGTEVSAKYKGAFCEAKIRKISKSVKCKVQYTNGLVAIVPDELIKGQIKIGANIEIKCNDKKELLEGTIQKIQDHSQYTVVFDDGDITSLKRSALCLKSGKHFAASATLDQLPLTHPEHIGTPTRNSIVYGRRSRKHIKSVGESEEEENIEMEEKDIGKVVCVEANDKKKIRDNWFPGLVVAPTAQSAVKTNVLEDYLVRSFKDGKYYTVPKKEITEFTKEIAAKVENPTLKTAVEKAILYLDKDELPPHWDRDLLFGIEKNCITTDSEGASDSDNSDEESIEEKDHFVAQLFKFMDDRGTPLNQAPMINEKDVDLYKLFKVVNNLGGFNKVGKCKQWKTVAQKIGHEQSVFSVKQAYQQYLHSFEDFYRKLGCTMLSHPRGVRSRSRFSRSIIRDVDKALPGTSLSSAEKNKQFSSYVKIESNEKKDKDKDEVIKEVDASKEILISKKSLKIFKADEKVTTLKNDDITKKIEKKKDKPEVVLKDSEVSKEGVTLKKSCKLLKTDEKIASIKTNEESGKKLDKKKEKTEFPIKDLETLKEFGISKKSCKMIKVEDVNNSRPKTSTKWDTEIEDLKESPKDIKVKKEVKETTTQKDIKKEEENIEILDLNEDESETSEDKKSEKKKYSRNLFGKSIRRNSKKEKVERIKPTETGLSGVRKMRSIKEQIKTFVKGMTPSFKKPKRGASTSQSDSTSQSKQDDEFPKVTRSKSKDELPPRLRKLSVLNNETQRIQLPVLSCASPSENLNKIKKSDEGLEKRKNIKKKKDDKDDKTLSTESNIQPMNSEIDSCDKDTPIAVGDDLVVYYGDKHATTYDAKVLNVCDIEGAKKFYVHYKGWNSRYDEWIDVTRIALLKSKILEPELDLDPDGDDGTKSDYKGSDMKKLPPINNRTRRSVTPSMPYSSRKKSPFSNVRPTRTCTLNDRPLSSIGKYTLRDNSDSESEYSGNLGLAKQYNKRNLQPPKLSRPDFDDSIKLETSETVNQKVSPDSDTQKKSPYPKTYPGKEELLQRSAPRIPKSCVFKVHSNKSEEIEICEQVTLKPPFEYNYEMSQSMKNKNKEEDDDENENDDDVNENDEDNDISIDNDGTSKIETKSAVIHYLSPKEKSEKNDCQHLPEISNAKEYNFALKSNMQYYSSSSEDEQIQLKNKIMEDEKISSIKKLEDFKKSGTDFDLNKIRSEMKGIGYIPSSSNMNVENAINSDPPELKAEVDRNPDDLDEPEDIYEFKDSESSDFIVMPSVIEEKNRRIIKHNEPPKLYSYDKSVEISNMPELTPKMEILEKNNDYVTPFQSVIYPALPFKDKVGLDFNKKEDEMVDHSSSQSCNETSEFEKLNPSVISQSIEKQTSSVKLNTESYPVNIEESHKTDEVLDLCIKPIDNSNNNIFSTRESNETDDTVEEDDDEDEDDDDSKLVIAENDKIEADCHTESDLVVIDEEQNSSSEPTNRFKVSNSMQDTDIESKSSDETRRSASLKHDEHDDESTTSCNENIQDTLVHSFQVYTNTDHNQSSKTSTYQLPSNYQSYTDNYDSTKSGFDIEETSTKSSTTESAKDSIFNISDEITAFKDKYSGISNDERIKTENQPVNLTGLQELQCREEIVDEETLNNAIENNYSRNTDYNVYKPSTSKSFFNVISNPNTVNRENFLETKSSSDEKSNFFEKRETCLQKNNSYEVINNVSGKNTSYVFDNNTPSSNSKDSMYEISTPSTSKDNFYNNSIPSSSKNLSNLDTDVNNVLFCEETIPGSPTGTPDEHSDDQDERKKSFFEEREAASAMFAMNLAFRKSTIASREAKDNSSQSLEYNIHQRDENIDQRHLQFLAEVSSRDEGAYFNKSAISEPIDEQVAKLEKPQIKRKISSNENSIGKRNKIQYSASESENERYDHNKVQIPTKDGKPLVIFTPEMDSAQRQAVILSKINELRKDYILVKARIVVVDRRRKKIRKRKREMAKLNSTNSNKRLPENSTNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-