Basic Information

Insect: Cyphomyrmex costatus
Gene Symbol: ZNF711
Assembly: GCA_001594065.1
Location: NW:12088-14817[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 8.3e-05 0.0051 16.6 7.5 1 23 23 45 23 45 0.99

2 17 0.011 0.65 10.0 3.1 1 23 50 73 50 73 0.96

3 17 0.00044 0.027 14.4 8.1 1 23 92 114 92 114 0.98

4 17 0.093 5.8 7.0 4.2 1 21 120 140 120 143 0.90

5 17 5.2e-06 0.00032 20.4 4.3 1 23 162 184 162 184 0.99

6 17 0.14 8.9 6.4 0.3 1 21 190 210 190 213 0.90

7 17 0.005 0.31 11.0 9.1 1 23 232 254 232 254 0.98

8 17 0.0025 0.15 12.0 2.1 1 21 260 280 260 283 0.91

9 17 2.9e-05 0.0018 18.1 7.5 1 23 302 324 302 324 0.99

10 17 0.0067 0.41 10.6 1.0 1 23 330 353 330 353 0.97

11 17 0.015 0.94 9.5 7.6 1 23 372 394 372 394 0.98

12 17 0.024 1.5 8.9 0.6 1 23 400 423 400 423 0.98

13 17 1.4e-05 0.00085 19.1 4.7 1 23 442 464 442 464 0.99

14 17 0.016 0.96 9.5 0.2 1 23 470 493 470 493 0.92

15 17 2.8e-06 0.00017 21.3 5.8 1 23 512 534 512 534 0.99

16 17 0.0005 0.031 14.2 2.1 1 23 540 563 540 563 0.96

17 17 0.0032 0.19 11.6 8.6 1 23 582 604 582 604 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	8.3e-05	0.0051	16.6	7.5	1	23	23	45	23	45	0.99
2	17	0.011	0.65	10.0	3.1	1	23	50	73	50	73	0.96
3	17	0.00044	0.027	14.4	8.1	1	23	92	114	92	114	0.98
4	17	0.093	5.8	7.0	4.2	1	21	120	140	120	143	0.90
5	17	5.2e-06	0.00032	20.4	4.3	1	23	162	184	162	184	0.99
6	17	0.14	8.9	6.4	0.3	1	21	190	210	190	213	0.90
7	17	0.005	0.31	11.0	9.1	1	23	232	254	232	254	0.98
8	17	0.0025	0.15	12.0	2.1	1	21	260	280	260	283	0.91
9	17	2.9e-05	0.0018	18.1	7.5	1	23	302	324	302	324	0.99
10	17	0.0067	0.41	10.6	1.0	1	23	330	353	330	353	0.97
11	17	0.015	0.94	9.5	7.6	1	23	372	394	372	394	0.98
12	17	0.024	1.5	8.9	0.6	1	23	400	423	400	423	0.98
13	17	1.4e-05	0.00085	19.1	4.7	1	23	442	464	442	464	0.99
14	17	0.016	0.96	9.5	0.2	1	23	470	493	470	493	0.92
15	17	2.8e-06	0.00017	21.3	5.8	1	23	512	534	512	534	0.99
16	17	0.0005	0.031	14.2	2.1	1	23	540	563	540	563	0.96
17	17	0.0032	0.19	11.6	8.6	1	23	582	604	582	604	0.98

Sequence Information

Coding Sequence: ATGTCAAAACATAACGATGATGAACGTTTCAAGTCTAATAAGGACCTATATACTAGAGGTGTATCATACAAATGCAaaacgtgtaataaagagtttaagaaaaaatcaagttttCATATGCATGAAAGAACTCATACAGACAAACTTTATCAATGCgagttttgtaaatataaatgtgtGCTAAAGGTACAGCTAAGTAATCACATGATATTAAAACACAACGATGATGAACGTTTCAAGTCTAATAAGGATCTATATGCTGGAGGTGTATTACACAAATGCGGAACGTGTACTAAAGAGTTTAAGAACAAATCGTGTTTTCTTAGACATGAAAGAACTCATATAGGCGAAAAACCTCATCAATGCgagttttgtaaatataaatctaaatataaaaaaacgcTAAGACAACATGTGGTGGCAAAGCATAACAATGATGAACGTTTCAAATCTAATAAGGACTTATATACTGGAGGTGTATCATACAAATgcaaaatgtgtaataaagagtttgTGGACAAATCAAAATTACATATGCATGAAAGAACTCATACAggcgaaaaaccttatcaaTGCGAGTTTTGTGTTGCTAAATTTGGATATAAAGAAGTGCTAAGACAACATGTGGTGGCAAAGCATTACAATGATGAACGTTTCAAGTCTAATAAGGACCTATATACTGAAGGTGTATCATACAAATGCAaaacgtgtaataaagagtttaagaaCAAAACGAATTGTCATAAGCATGAAAGAATTCATACAAgcgaaaaaccttatcaatgcgaattttgtgaaaataaatttagatataaaaaaacgcTAAGACAACATGTGGTGGCAAAGCATAACAATGATGAACGTTTCAAGTCTAATAAGGACCTATATACTAGAGGTGTATCATACAAATGCAaaacgtgtaataaagagtttaagaaaaaatcaaattttcataTGCATGAAAGAACTCATACAggcgaaaaaccttatcaaTGCGAGTTTTGTGTTGGTAAATTTGGatataaaaaaacgcTAATACAACATATGGTGACAAAGCATAACAATGATGAACGTTTCAAGTTTAATAAGGACCTATATACTGGAGGTGTATCATACAAATGCAaaacgtgtaataaagagtttatGGACAAAACGAATTGTCATAGGCATGAAAGAATTCATACAggcgaaaaaccttatcaaTGCGAGTTTTGTGTTGATAAATTTGGATATAAAGAAGGGCTAACACAACATGTGATGACAAAGCATAACAATGATGAACGTTTCAAGTCTAATAAGGACCTATATACTGGAGGTGTATCATACAAATGCAaaacgtgtaataaagagtttataAACAACTCAAAATTACATATGCATGAAAGAACTCATACAggcgaaaaaccttatcaaTGCGAGTTTTGTGTTGCTAAATTTGGAAATAAAGTAGTGCTAAGACAACATATGGTGGCAAAGCATAACAATGATGAACGTTTCAAGTCTAATAAGGACCTATATGCTGGAGGTGTATCATACAAATGCAaaacgtgtaataaagagtttaagaaCAAAACGCATTTACGTAGCCATGAAAGAATTCATACAggcgaaaaaccttatcaatgcgaattttgtagatataaatttagGCTAAAGGTACAGCTAAGTAATCACATGATATTAAAACACAACGATGATGAACGTTTCAAGTCTAATAAGGATCTATATGCTGGAGGTGTATTACACAAATGCGGAACGTGTACTAAAGAGTTTAAGTTCAAATCGTGTTTTCTTAGACATGAAAGAACTCATACAGGCAAAAAACCTTATGAAtgcgaattttgtaaatataaatgtag
Protein Sequence: MSKHNDDERFKSNKDLYTRGVSYKCKTCNKEFKKKSSFHMHERTHTDKLYQCEFCKYKCVLKVQLSNHMILKHNDDERFKSNKDLYAGGVLHKCGTCTKEFKNKSCFLRHERTHIGEKPHQCEFCKYKSKYKKTLRQHVVAKHNNDERFKSNKDLYTGGVSYKCKMCNKEFVDKSKLHMHERTHTGEKPYQCEFCVAKFGYKEVLRQHVVAKHYNDERFKSNKDLYTEGVSYKCKTCNKEFKNKTNCHKHERIHTSEKPYQCEFCENKFRYKKTLRQHVVAKHNNDERFKSNKDLYTRGVSYKCKTCNKEFKKKSNFHMHERTHTGEKPYQCEFCVGKFGYKKTLIQHMVTKHNNDERFKFNKDLYTGGVSYKCKTCNKEFMDKTNCHRHERIHTGEKPYQCEFCVDKFGYKEGLTQHVMTKHNNDERFKSNKDLYTGGVSYKCKTCNKEFINNSKLHMHERTHTGEKPYQCEFCVAKFGNKVVLRQHMVAKHNNDERFKSNKDLYAGGVSYKCKTCNKEFKNKTHLRSHERIHTGEKPYQCEFCRYKFRLKVQLSNHMILKHNDDERFKSNKDLYAGGVLHKCGTCTKEFKFKSCFLRHERTHTGKKPYECEFCKYKC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -