Ccot007115.1
Basic Information
- Insect
- Cyphomyrmex costatus
- Gene Symbol
- CSRNP3
- Assembly
- GCA_001594065.1
- Location
- NW:119126-162512[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.52 6.1e+03 -3.7 3.2 62 101 90 128 68 159 0.46 2 3 0.46 5.4e+03 -3.6 0.1 52 75 483 506 465 540 0.50 3 3 2.9e-101 3.4e-97 324.0 9.0 1 218 759 971 759 971 0.92
Sequence Information
- Coding Sequence
- ATGGCAGAAACACCCGAGATGGAATCGCCTTTGGCCCGTCAGGACTGTTTTGTTGAGGCCCAAGAGGATTCCACCTCAGTGGAAGTCGAGGCAGAAGGTACACCGTCGCCAGGAATGATATCGACAACGATAACGACGACAACAACGGACGCCGGCGACAACGACTACGCGACGTATCCGTCCGTCGTGCGGGACTCGTGCGAAGACTTGGTGGTCGAGAGATTGGACGAAGAATCTGAAGCGAGACAGTCGAGTGATAAGCCGGAAGCGAGTCAGggtgaagaagaaaaagaagaaaaagaattgaatATGGGTTTAACAATAGGCAAGAAAGTTAACGAGAAAAACGAAAAGGACGAAATTGATGCGAAATCGACGGAAGACACTCTTCAGGAACTTGAAGGATCACCAAGAATGCCTGATTCTCAAAATCGCGATATCGATGAATCCTCGGAGTTGTGGGAAAATGGGATCGAAGAGTCCATGTCGTCGGACGTTTCCAGGAAGAGACCAGCCGCGAGTGATTTCATGCCGATTGGCGCGGAGATCAAGAGAATCGGCATCGAGATCTCGGAGGAGCAGGCAACTCAGCTGAGGAATGATGTCAGGAGACTATCGCCGGTATTGGTGAGCTTGCGAGAACGGACTTTGGGTGAAGTATCCCTAACCTCGGAGTCCTGTCTCTTCGGGGACGAGCTAGACGGTAGGATAACGCCAAGATCCCCTGCGAGATCGTTTATGGTGAACAATTCCAGAAATCAGGATGTCGATCAGAATCGCGGGAAACAGGATGTGAATGAGGAAAACAAAGTGGAGAAAGAAACGATCGGTAGAATCAGTTCGGATCCTTTAGAATGCACGAGCAGCGGTGACGTCGAGGTAACGATAAATGGTGcgaacagaaaaataaattatgaaagcgAAGGCGAAATTACGACGTTCGGCGTTGACGTGGATTCTTCGATATTCTCGAAAAGCGATAATTTGGATGGGACGACAGAATCCTGTCAAGACGAAGATGCGAATATGTCCACGAACGCTAGAAGCGAGTCTTGTACCACGATTAAAAAACATGTCAAAGCAACGATGAGTTCTGAAGTACCATCAAGTCCATTGTGTCGAAATTTAAGTATCGTATTGAATCGCATTGAAAATGAAGAttcaaaaaagagagaagaaagtgCCGCAATAGATACAAACGTCGATGAGAACATATGGAATTACGTTGTCGAGGAGAACTCGCCTTATTCCGatggaaaaaagaatttcatcGAGGAGGAGCACGATTCGTTCAAATCGACTTCGGGGACTCCGGATAAGAACTCGAAGAAGCAACGGTGGCAGAGTCCCACCAATAATTCCAGTCCAATAACCAGATCGAAAAAGTATGAGTTGATAGAGAGTGCTCGTAGTCCAGACAGTGAATTGACCCTGAAGAAGTGTAAAGTAGTACTGGAGCGAATCAACAAGGCCACGGGCCATTCATCACAATCGGAAAATACAGAGGAGAGTGAGAGCGGAGCTTCAAGGGAACTCGAGAAGAATGACGAATCCGCGCCTGTCGCAGTGATTGGTAAACTCGAGGAAAACGAAGAGGTGGTGCTGGCGAGCTCGTCGCCCACGGCCGAGGACAGTCGCGTGTCCAACGAGCTGGACTCGTCGGAGACGATGCCGAGTTCGCCGGAAGAGACACCGGAAGTATCGGTAGATGTTGCCGAGGGCGTCGACACTGAGACGGAAACGGAAACTGGTTCCGACAGTTCGGAGGTGTCGCCTATCACCAGCATCCGTCACGAATTGCGTGACGCCGACATGGCGCCCGATCAACTACCCTGCTCTGAAGGGGTCACCTTGTGCTGTGTGGAGGCGATAGCGCCGATCATGACGAGATTGGAGGCCGACCGACCAGAAGCGTACACGGAGGATTCTGCCGAGAGCCTGGCCTTGGCAACTGGTGCCAGGGACGAGGTTAGATCCGATGGGAGCGATTCTGGTCTGGGAAACGAAATCCCTGGTGACCCAGGACCGGCTCCTGCGCCGGAAAGTGATTCAGAAACCTCTTTTCTCGACAGGCTGCCGGATGACATTCTCTCTGATAAAGAAAAAgGGGTGAATCAGTTGGATGGCTATGCGGCGTCCTCGGGGACACCCGGAACACCAGGACAGTTACCTCTGACGAACTTCCGGACGCTTCCGGCCAAGAGTAACCTGAAGCGTAGGCTGACCGATTGCATGGAAGGCGACGAGTCGCGGGGTAACGTTGACGAGCCTTTAAAGAAGAAACGCAACATCCAGTTTGACGCAGTGACGGTCTATTACTTCCCCAGAGCACAGGGTTTCACCTGTGTACCTTCCCAGGGCGGCAGCACCCTGGGCATGAGCGcgacgcacacgcacgcagaGAGGTTCTCGTTATCGGAGCACGCAGCCGAGCAGAGGCGGATCCACCGAGCGCGCCTTGCGCAACTGCGCTCGGAACGCAACTGCGCGACCAACTGCGTGACAGAGACAGCGTCCAGCTCAGAGGATCCGAGCGACGACACCGACGAGGAACCGAGCGACAACGAGGAGCTCGACATCGACAGTTATTACTTCCTACAGCCGGTGCCCACGTGGCAACGTCGAGCGCTTCTTAGAGCCGCCGGCGTACGAAGGATAGATGCTGTTGAAAAGGATGAATGTCGTGATATCCGCGCCAGCAGAGAGCATTGTGGATGTGGCTGCAAGGGATACTGTGATCCTGAAAGTTGTCCTTGTAGCAGGGCCAACGTAAAGTGTcagGTGGATCGACCAGGTTTTCCTTGCGGCTGCACGCGGGACGGTTGCGCGAATAGTACAGGCAGGATTGAGTTCAATCCAGTACGGGTGCGGACGCATTTCATCCACACGTTGATGCGATTAGAACTGGAGAAAAAGCAGCGTGACGAAGACGGTGGTGGAGATCATGATCAGGTGATGGACAATCAGGGACAGAATGGCAGGGGGGCTCGTCCTCTGAGGAATATCGGTTCCCTAGGAATGGAAGCTACCGTGGGTGATGTGTGCGCAATTCCGGGTACGGGACCCGGGGGTGGTGGATTCACGACCTTACACTATGAGACAAGTCACGAAGGTGTCGGGGCTGGTGTGGCTGGCTGCCAACCAGAGGTGCCTGGCACGCGGGAGGACAGTTTGGATTTGTATGCCATTAGAGATGATTGTTATGCAAGCGAGGATGCGGTAGACAGCAGCCAATCGGTCGTTGTGCAGCGGAAGCTACATCCAGAATTCGGCCAGGCCTTTCAGAGCTTTTCGCCCGGCGTGCAAAATAGTGCcaccggcggcggcggtgggggtggtggtggcggtggtAGCGGTAGTGGCATGAGTTTCCAGCAGTCTTCGTACCAAGACTATGGATCGCCTTATGCGAGTCTGCCGTCTACGTCGCGATTCCAGCCACCGCCACCGCAGTTCCAATCGCCGCCCAATCCGGCTGCCTTCGCGCACTACGGACCCTACGGTGGGCCCCAAGACGCCGCGAGCACCGCTCTTCAGGGCGGTTGTACCGGCCAAGTACATCAAATGCCACAGCCACCGCCTCCCCAGGGTcaacagcaacaacagcagcagcattCGTCCTATGATGCGACGGTGTTCGCGCAGGACGACGCTACGGGTACCGCACAGTACACGAATCTCACCAATTCGGTGCAGCCGATGAATGCAACAGTGGTGCAGCAGATGCAGGGCAAGCTCGAGCCTTTCTCGGAGCTACTCAGCGGTAGATACTCATACTATGGTGAAATGCATGAACCGCAGCAACATCACGGTACTTACGGTACTCATGGCACGGCCGGCAAAGTTGCGGAAATGATTGAGCCCAGTCAGGTCAGCAGTGAGCAACAGCCCGATGGCGCGTCCGAGGACTGCGATGAGAATTTTGGTGAGATCATCAAGAAGTCTATGGTGGAGACTGTATCTGCCTAG
- Protein Sequence
- MAETPEMESPLARQDCFVEAQEDSTSVEVEAEGTPSPGMISTTITTTTTDAGDNDYATYPSVVRDSCEDLVVERLDEESEARQSSDKPEASQGEEEKEEKELNMGLTIGKKVNEKNEKDEIDAKSTEDTLQELEGSPRMPDSQNRDIDESSELWENGIEESMSSDVSRKRPAASDFMPIGAEIKRIGIEISEEQATQLRNDVRRLSPVLVSLRERTLGEVSLTSESCLFGDELDGRITPRSPARSFMVNNSRNQDVDQNRGKQDVNEENKVEKETIGRISSDPLECTSSGDVEVTINGANRKINYESEGEITTFGVDVDSSIFSKSDNLDGTTESCQDEDANMSTNARSESCTTIKKHVKATMSSEVPSSPLCRNLSIVLNRIENEDSKKREESAAIDTNVDENIWNYVVEENSPYSDGKKNFIEEEHDSFKSTSGTPDKNSKKQRWQSPTNNSSPITRSKKYELIESARSPDSELTLKKCKVVLERINKATGHSSQSENTEESESGASRELEKNDESAPVAVIGKLEENEEVVLASSSPTAEDSRVSNELDSSETMPSSPEETPEVSVDVAEGVDTETETETGSDSSEVSPITSIRHELRDADMAPDQLPCSEGVTLCCVEAIAPIMTRLEADRPEAYTEDSAESLALATGARDEVRSDGSDSGLGNEIPGDPGPAPAPESDSETSFLDRLPDDILSDKEKGVNQLDGYAASSGTPGTPGQLPLTNFRTLPAKSNLKRRLTDCMEGDESRGNVDEPLKKKRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERNCATNCVTETASSSEDPSDDTDEEPSDNEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRPGFPCGCTRDGCANSTGRIEFNPVRVRTHFIHTLMRLELEKKQRDEDGGGDHDQVMDNQGQNGRGARPLRNIGSLGMEATVGDVCAIPGTGPGGGGFTTLHYETSHEGVGAGVAGCQPEVPGTREDSLDLYAIRDDCYASEDAVDSSQSVVVQRKLHPEFGQAFQSFSPGVQNSATGGGGGGGGGGGSGSGMSFQQSSYQDYGSPYASLPSTSRFQPPPPQFQSPPNPAAFAHYGPYGGPQDAASTALQGGCTGQVHQMPQPPPPQGQQQQQQQHSSYDATVFAQDDATGTAQYTNLTNSVQPMNATVVQQMQGKLEPFSELLSGRYSYYGEMHEPQQHHGTYGTHGTAGKVAEMIEPSQVSSEQQPDGASEDCDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01409106;
- 90% Identity
- iTF_01477557;
- 80% Identity
- -