Ccot005678.1
Basic Information
- Insect
- Cyphomyrmex costatus
- Gene Symbol
- -
- Assembly
- GCA_001594065.1
- Location
- NW:85272-91959[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.5 1.2e+03 -0.9 0.0 23 46 224 249 213 249 0.73 2 5 3.5e-13 2.8e-10 39.6 0.8 1 45 255 301 255 302 0.96 3 5 5.6e-08 4.4e-05 22.9 0.9 4 43 311 354 308 357 0.95 4 5 1.4e-09 1.1e-06 28.0 0.0 1 45 363 408 363 409 0.95 5 5 4.6e-11 3.6e-08 32.8 0.1 3 44 417 458 416 460 0.95
Sequence Information
- Coding Sequence
- ATGAACGAATTCGATGACTTAGACCTTTTGGATATTCAAGCTGATATTCAGGCTCTTGATGAAGCTTTAGCCTTATCtgcgaaaaaaaaatccgAGCAATATGCTAGTAACAGTCAACAATCTGACGTTTTGTCGAATGTCGTCGCTGAGGATAACGATGACTATGTCAACTATCTCCAAGCAAATCAGGAAATCGAAAAATCTTTGAACGCTTACGAGATTAATACAAGATTGATCACGGGCTTGACGATAGCTAAGAAGAAATTGACTGCTCTGCTGGAAGAATGCGAGCAGAAGATAAAGCTGCTGGACGAGAAGTTGATGAAATCTACGGATGAATCGAGCTCAAGTTCCAAATTGGCAATCAGCAATGCTGGTATACCATATTTCAAAGACAAGGATTATTTCAGTGCTCCTAAGAATATTGATACCAAGCGAAAGGAAGCCGCTGGTGAAGTGTTTCTTTTGAATTTGAAAAAGCCAAACCGCTGGTCAGGAAAAGACAGAGAAATGCTTTTAAGTGCCATAAACAATCAAGCTATCGAATCGGTACTGTCTGGAGGAttcaataaagaaattgaCGAGTCGACATCTGATAATCAAACTAAGTTGGTAATTCCCAGAAACTTCAACGAGATGGTGGGGCCGTTGGGTGCGAGAGATTTCGATTGGTATAAGATTTCTGTTATGGATTTCGATAATAAACATTCACCAGGCGAATGCAAGGCTATGTGGAATGTCTACCTGCATCCCgcttttagaaaaaatgaatGGACAAATGCAGAAGATAAGAACCTGTTGAAATGTATCAGAGAATATAAGTGTCAAGATTGGGATGCTATTGCGcggaaattaaatacaaaccGTAGCGCATATCAATGTTTTATCAGATATAATACTATCAAAAAAGTGCCGTTAGCAGGACAATTGTGGACCAGGCAGGAGGACAAACatctcataaaaattataaacgcaaTCAAGATCGGAGACTACATTTCTTGGTCCGAAGTTGCTAATCATTTTCGACACAGAACCAAGCAACAAATTTACGTACGATGGACGTATAGGAAAGCACCACATTTGAGAAAAGGTAGATTTACTTATCAGGAAACAACAACTCTCCTGAAAGCGGTGCAGAAATATGGCATggatttctgtaaaatttcaaGCACTGTAATGCCACATCGAACTTCGATACAACTCCAAGAGCGTTACCAAACGGTGGTGTCCAATGTCAATAATTGGAATGTTTGGACACTCAACGATGATATGATGTTAATTAATCTGCAATTGAAATACAGTAACGATTGGTCCAGAATAGCCAAGTATTTTTCCGATAAAACAAGAACACAAGTGAGACATCGatataatgcattattaaaatatatagcgaAGGGTACAAGTCTCGAAAGTATACCTAGACCGCCCCCTacaatttctaaaagaaattttattaataaaaagtcatCCAATAAAGAGAGCACCAAAAAGacacttattaaaaatactatatctGAGATACAACctgttgtaaatatttttgatattcagTTAAGATTGTATGAAGCTCTTTGTTTTCCACTTTCAATTAAACCtaataattctgaaaaattttacaatagcgAGCAGCTTATGCGTTACACTAAGAGATTATACAAcacattgaatttattaaacgcCAATCTTGATATTCCagataattttctgaaatatgtacaattaaataacaaagagAAACAACTTCTAGTTTCtttcaaagaatatttaaacgtaagacatatacagaataatgaactgatagaaaaatatagtgTACTAATGTTTGGTTGTACCCCAGAAGTTAATGAGAGTGATTTTTTCATACCACCACTTCCATTTGATGGACATGTAAAGctcagaaaaattaaaaatcaaaagaacACATCTATAGATTACGATTTAgacattaatgaaaaatttcttattgatGTACATGCAGATTTCTCTATAATTCCCTCTGTATTTCCTTTTGTAAGTATTGAGGAAGACATTCAGTTTCATAAACTTGGTCAGTTCTTAATAAATGATtaccataattttttagaacaaaatgtagatttatataaatcaacaAAATGTATCTTTTCTTTTGCTAAAACAAAGACTTCAAAAGAGATTTTATTAGAACACAATAAATTGAATGTAAATTTAGAGATAAGTTCGGAAGATTGCAACCAAGTGAAATTAATCAAGTCGAAAAAAACTAGATTAAATGTAAGTTTGGAAGATTACGAACAAGtggaattaaataagttaaagaAAGTTGGTAGATCAAAGGTAAGTTTGGAAGCTTATGAACAATTGGAATTTAACAAAGTTGACAAAGAAACTACGAGTGTCAAAGATGATGAAGATGTAAATATGGATAATATAATTCCACCAAATCAAGCGACTTTATTAGGTTTAAAGAACTTGTTTCTTTGGAAATTACTGTATGATTATCAACACGAATCTCATCTACGATGTGAATTGATGGCATTGTTTGGAAAGGAATTAAAATCAGAACATACTTCGACAAATTCTGAACTTACAAAAATGGAGAGCGCTGAATATCAACTGCTGCGAACGCGCCTACGGCAATTATTTGAACTTCCAATAGGTTTGTCGAACACTATATTGGAAGTGCAAGGGCCAGAAGCGATATTTTCAAAAGATAAGCCGACTCATCAAATAATCGCaactatttcaaaaaaaagaaagtttgaAGACTATGAAAATACAGATATAAATcctttgcaattaaataaaagagatgACTCAAGTATTTCGGCTAATAACAATTCGCAACTTAACTTGGGCGTTACATCGAGAAACCTTCCTGAAGTACGTAGCtgcaaaagaattaataagaaatataaaatcactAGAAAATAA
- Protein Sequence
- MNEFDDLDLLDIQADIQALDEALALSAKKKSEQYASNSQQSDVLSNVVAEDNDDYVNYLQANQEIEKSLNAYEINTRLITGLTIAKKKLTALLEECEQKIKLLDEKLMKSTDESSSSSKLAISNAGIPYFKDKDYFSAPKNIDTKRKEAAGEVFLLNLKKPNRWSGKDREMLLSAINNQAIESVLSGGFNKEIDESTSDNQTKLVIPRNFNEMVGPLGARDFDWYKISVMDFDNKHSPGECKAMWNVYLHPAFRKNEWTNAEDKNLLKCIREYKCQDWDAIARKLNTNRSAYQCFIRYNTIKKVPLAGQLWTRQEDKHLIKIINAIKIGDYISWSEVANHFRHRTKQQIYVRWTYRKAPHLRKGRFTYQETTTLLKAVQKYGMDFCKISSTVMPHRTSIQLQERYQTVVSNVNNWNVWTLNDDMMLINLQLKYSNDWSRIAKYFSDKTRTQVRHRYNALLKYIAKGTSLESIPRPPPTISKRNFINKKSSNKESTKKTLIKNTISEIQPVVNIFDIQLRLYEALCFPLSIKPNNSEKFYNSEQLMRYTKRLYNTLNLLNANLDIPDNFLKYVQLNNKEKQLLVSFKEYLNVRHIQNNELIEKYSVLMFGCTPEVNESDFFIPPLPFDGHVKLRKIKNQKNTSIDYDLDINEKFLIDVHADFSIIPSVFPFVSIEEDIQFHKLGQFLINDYHNFLEQNVDLYKSTKCIFSFAKTKTSKEILLEHNKLNVNLEISSEDCNQVKLIKSKKTRLNVSLEDYEQVELNKLKKVGRSKVSLEAYEQLEFNKVDKETTSVKDDEDVNMDNIIPPNQATLLGLKNLFLWKLLYDYQHESHLRCELMALFGKELKSEHTSTNSELTKMESAEYQLLRTRLRQLFELPIGLSNTILEVQGPEAIFSKDKPTHQIIATISKKRKFEDYENTDINPLQLNKRDDSSISANNNSQLNLGVTSRNLPEVRSCKRINKKYKITRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -