Ccot008793.1
Basic Information
- Insect
- Cyphomyrmex costatus
- Gene Symbol
- Myb
- Assembly
- GCA_001594065.1
- Location
- NW:6713426-6756129[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.5e-14 5.9e-11 41.7 0.2 1 45 66 115 66 116 0.93 2 3 4.4e-21 3.5e-18 64.9 2.3 1 46 122 168 122 168 0.98 3 3 1.1e-20 8.8e-18 63.6 0.2 1 44 174 217 174 219 0.96
Sequence Information
- Coding Sequence
- ATGTTCACCCTGAGACGATGCGGCAATATGCTTCTGAATATAAAAAGATCTCGATCTGGTTACGATTCTAGCAGCGGTGGAGAGTCCGACAACGAATACAGTACACCAATTAGCCAAGGCAATCAAGTACAAAGTCAAGCGCAAAATCAACTTTCCGCCAGTGTCACAAATTATGGACAGggaaaacatataaataaaggaCGATGGACCAAAGAAGaaGACGCTTTATTGAAACAATTAGTAAGCAACGCGGAACAACAGAACACTGGTTTGCGGTGGGACATTATATCCGGCCAGTTTCCAGATAGGAGCGATGTACAATGTCAACAGAGATGGGCGAAAGTCGTGAACCCGGAGCTGGTCAAGGGTCCATGGACGAAGGAGGAAGATGAGAAAGTGGTAGAACTTGTACGAAAGTATGGTCCGAAAAAGTGGACATTGATAGCACGAAATCTTAGAGGTCGGATTGGTAAACAATGCCGAGAACGATGGCACAATCACTTGAATCCGGAGATAAAGAAAACTGCATGGACGGAGGCTGAAGACAAAATAATCGTTGATGCCCATCGTAGAGTCGGCAATCAATGGGCAAAAATCGCTAAGCTCTTACCGGGTAGGACTGacaatgcaattaaaaatcattggaACAGTACGATGAGAAGAAAATATGAAGGTGAAGAAGGAAGAATTGTGTCTAAAGGCAGAGGCAAGAGAAAAAATACACAGGGTACTACTGTAAGGGATACGCTTCTTCTGGAAGACGATCAGAATCAGATGAAAACTGTCTCGACTAGTAACGGTTCGACAATAACGGCGAGTAGTTCCTCGCAGAGTCTCGACATCGAGCATTTGGATTGGGCCAGAAATTGGGAACATCGTGCTGCAGCGAGTTACCAGAACGCTGTGGAACTAAATAGGCATACAAGCGGCAATGAAAAGTGCGCGTCTCCGTTGAAAAGAGGATCTTCGCGAGCGAAAGCTGAGACGATTTCGTCATTATCTAAATATTTTAACTTGCAGCAAATACAAAGTGAAACATCTGGTTCGAAGAGCTCGGAGATAAAACTGATGCCGATGCCTGATTTAGAGGATATACCCGAGCAACATGTTGATAAGAAAAGTAGTCCTCCGCCCATACTACGTAGACGTAGAAACGCGCACGGTTTGCTGCAAAGGATAGACGTCTCCGACGACGGGAATCAGTCGGATTATATCGTAACAAGCCAGCAGATGCAAACGGGAAACATTACCCCTTCGACTCCCATCAAGCAACTTCCATTCAGTCCTTCGCAATTCTTAAACAGTCTGAGTCCATCGGAGACGTGGCCGCGAGCAAGTACGCCCAAAGGAAGCAGTCCCGGTCCGCTTACGACTCCGCAACCTACTGGTTTTCGAAGAAGTCAAAATGACGGTAATACACCAAGAACACCAACGCCATTTAAAAACGCTTTAGCTGAGCTCGAGCGACGAACCGGAGCGGCACAGTTACCCGCTACTCCTAGTCGTCTAGATGCACTAACCGAGATAATAAAGCAAGAGACCGAGAACGAGGCTGGAACGAGTACGATTCAGGATCAAGACTCTGGCTACAGCAGTATGATACGAAGGCGCGGTAAAGAAAACAGCGCACCAGGAGGAAAACGTGCGAGGAAGGCTCTTTCTCAGGCTTGGGCATCTCAAGACAACTCCGAAATTAGTTTCCTTGTAGAAACACCAAGTAAAAGTTTGGATGCTTCCACATTGTTTTCACCTGCATCTATGGCATTAGAAGATAGCTTTCTGACGGCAGGAACCAGTCCTACAAAGACTCCTCACGACTTTACGTCCGTACAACAACGGAAGCCGAATGCCAAGAGAGCAATCACGTTTGACGCATTCGACAGTCCTTATTGTTTCTTCAGCCCTCTGCCTACCAGGCCGGTAAAACGCACCAAGgcACAACTGGAAGCACAATGGATAGCAGTGGCGTGTGGTCGTACCCGGGACCAGCTTGAAATGACTCGCGCCGCTCGACGCTTTCTGAACAATCATGGATACGTGCCGTTGCGCCCACGTTCTTTGAAtttctga
- Protein Sequence
- MFTLRRCGNMLLNIKRSRSGYDSSSGGESDNEYSTPISQGNQVQSQAQNQLSASVTNYGQGKHINKGRWTKEEDALLKQLVSNAEQQNTGLRWDIISGQFPDRSDVQCQQRWAKVVNPELVKGPWTKEEDEKVVELVRKYGPKKWTLIARNLRGRIGKQCRERWHNHLNPEIKKTAWTEAEDKIIVDAHRRVGNQWAKIAKLLPGRTDNAIKNHWNSTMRRKYEGEEGRIVSKGRGKRKNTQGTTVRDTLLLEDDQNQMKTVSTSNGSTITASSSSQSLDIEHLDWARNWEHRAAASYQNAVELNRHTSGNEKCASPLKRGSSRAKAETISSLSKYFNLQQIQSETSGSKSSEIKLMPMPDLEDIPEQHVDKKSSPPPILRRRRNAHGLLQRIDVSDDGNQSDYIVTSQQMQTGNITPSTPIKQLPFSPSQFLNSLSPSETWPRASTPKGSSPGPLTTPQPTGFRRSQNDGNTPRTPTPFKNALAELERRTGAAQLPATPSRLDALTEIIKQETENEAGTSTIQDQDSGYSSMIRRRGKENSAPGGKRARKALSQAWASQDNSEISFLVETPSKSLDASTLFSPASMALEDSFLTAGTSPTKTPHDFTSVQQRKPNAKRAITFDAFDSPYCFFSPLPTRPVKRTKAQLEAQWIAVACGRTRDQLEMTRAARRFLNNHGYVPLRPRSLNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00129669;
- 90% Identity
- iTF_00181234;
- 80% Identity
- -