Ccot006236.1
Basic Information
- Insect
- Cyphomyrmex costatus
- Gene Symbol
- kn
- Assembly
- GCA_001594065.1
- Location
- NW:258681-346133[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-230 2e-226 752.2 6.1 39 533 20 504 16 509 0.91 2 2 0.0028 32 2.0 6.0 447 512 469 534 456 554 0.68
Sequence Information
- Coding Sequence
- ATGAGGCAGATATTGAAGGAAGAACCTGTGCCACGTGCTTGGCCGCAGCCCGCGCTCGCCGACAACGGAACGGTTGGCGTGGGCCGAGCGCATTTCGAGAAACAACCACCGAGTAATCTGAGGAAGAgcaattttttccatttcgtAATCGCCCTTTATGATCGACATGGCCAACCTATCGAGATCGAAAGGACGTCGTTCATGGGCTTCGTCGAAAAGGATCAGGAGTCTGAAGGCCAAAAAACGAACAATGGCATTCAGTACAGTCTACATCTGCTCTACTCTAATGGCGTCAGACAGGTGCAGGATATTTACGTCAGGCTTATAGACTCTGCGACCAAACAAGCAATCATGTACGAGGGACAAGACAAGAATCCGGAAATGTGTCGCGTTCTGTTAACGCATGAAGTTATGTGCAGCCGATGCTGTGATAAGAAGAGCTGCGGTAACAGGAATGAAACGCCCAGCGATCCTGTCATCATCGATCGATTCTTCCTCAAGTTCTTTCTCAAGTGTAACCAAAACTGCCTCAAGAACGCTGGCAATCCACGTGACATGAGACGCTTTCAGGTGGTCATATCTACACAAGTGGGAGTGGAAGGACCATTACTAGCGGTTTCGGACAATATGTTCGTCCATAACAACAGCAAGCACGGGCGCAGGGCGAAACGTTTGGACCCTAGTGATCCTAGTGAGTACAATAGTTTATATCCGCCAATACCTCTCCAAACGCCGTGCATAAAAGCGATATCGCCTAACGAAGGTTGGACGTCGGGTGGATCTACCGTCATAATCATCGGAGAAAATTTCTTCGACGGATTGCAAGTAGTTTTCGGATCAATGCTAGTTTGGAGCGAGttCATCACTCCACACGCGATCAAGGTGCAGGCACCGGCGCGACAAATACCCGGAGTCGTTGACGTCACGTTACATTACAAAAGCAAGCAATTCTGTAAAGGAGCGCCTGGAAGATTTGTCTATGTTTCGGTAAACGAACCTACGATCGACTACGGCTTCCAAAGGTTACAGAAACTTGTTCCACGGCACCCCGGTGATCCTGAAAAGCTTCCGAAGGAGATCGTGCTGAAGAGGGCGGCGGATCTAGCGGAAGCCATTTATAGTATGCCCAAGAGCGGAAACATGGGGATTGCGGGGGCACCGAGAAGTCCAGGCTCGGTGCACGCACCCGCGCCCCCAACATCCAGTTCGGCAACAGCCTTTAATTCGTACACGGGGCAACTTGCAGTGACGGTGCAAGAGAATGGTAGCGCGGCAAAATGGACGGACGACGGTAGTTCCGTGACGACAGGAGCTGCTGCTGACGGTggaggcggcggcggtggcggcggcggcggtggcggcagcGGTGGTAGCGTCGGTGGCAACGTCGGCGGTAGCGCCGACGCCTATAGACAAAGCAGCAGCGCAAGTCCACGTGGTGTCGTAACCGGCGGTGGTTATTGCGGTAGTTCAGCCAGCACACCACACAGTCACAGTACCAACGGAAGTTATTCTGTCGCCAATCCGTATACTGGTAGCCCGACTCTCTACACCTCACGACTAGGAGAGGTGGTCGGATCACCATTCAACATGAACCCATTTATGTTGCCCACCTGCAATCAAGGATACTCAGCCGCTGCCAGTCCACTGCTTTCGTCAAATGGCAAATAG
- Protein Sequence
- MRQILKEEPVPRAWPQPALADNGTVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRHGQPIEIERTSFMGFVEKDQESEGQKTNNGIQYSLHLLYSNGVRQVQDIYVRLIDSATKQAIMYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVGVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSDPSEYNSLYPPIPLQTPCIKAISPNEGWTSGGSTVIIIGENFFDGLQVVFGSMLVWSEFITPHAIKVQAPARQIPGVVDVTLHYKSKQFCKGAPGRFVYVSVNEPTIDYGFQRLQKLVPRHPGDPEKLPKEIVLKRAADLAEAIYSMPKSGNMGIAGAPRSPGSVHAPAPPTSSSATAFNSYTGQLAVTVQENGSAAKWTDDGSSVTTGAAADGGGGGGGGGGGGGSGGSVGGNVGGSADAYRQSSSASPRGVVTGGGYCGSSASTPHSHSTNGSYSVANPYTGSPTLYTSRLGEVVGSPFNMNPFMLPTCNQGYSAAASPLLSSNGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00879410;
- 90% Identity
- iTF_00142224;
- 80% Identity
- -