Ccot001944.1
Basic Information
- Insect
- Cyphomyrmex costatus
- Gene Symbol
- grh
- Assembly
- GCA_001594065.1
- Location
- NW:3866350-3930969[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-63 2.4e-59 199.7 0.0 24 221 402 601 388 603 0.91
Sequence Information
- Coding Sequence
- ATGGAGGGCGATTGGCGCGCCTACTGTGAGCATCCGCTCTCCGTAGCGACCGCGGCCATGCTAAACCTTCAGCAGCAGCATCAGTCGGCGGTAACTAACCACAACGATGATCCTGCTGCGTCTTACGTCTATGAATACTACAAATTGCCCGAGAAAACGGCGGATGTCAAACTGCCACCCACGCACGAACTCTGGTCTACGGGTGTGATGGGCCAAAAGCTGCTGGTGCAAGAGGCGCCTGGCTCCGGTTCCGCCTCGACGAATCGCATGGAAGGCGGTGAAGGTGCCGGAGGAGGGGAGCTACACCACTTCCTCCAGTACAACCAGCAATCTCACAGTCCTAACCAGAGTCTGCAGGGTGGCCTTCCACTTCCGTTGAGCCCACAACCCCTGCGACACGACGGTGCCTCGAGCGCCGGCATCGTCGGGGTCAAGAGGGAACCAGAAGATCTTAGCTCGTCACGCGGGGGCCAACAATCCAGTAAACGGCATAAACAGACGCAACCCGACAGTCCCACACCGCCGGGAATGTATCATCATCATCCGCATCAGTTACAGGTGCAGCAGTACGGCAGCCCTTACGACCCCTACACGTCGTGCAGTCCGAGATTACAGTCGACTGCCTACACGTCTACGTCGGCAACCGGAACGGGAAATGCAACGGCGAATCCGGGTGGTGGCCTCCATCAGGAGGCGACGACAGTCTACGTCGCCGGTGACGCACTGCCGCCACTCGCTTCATCCAGCTCCGCGTCTTCGCTATCCACCACGACTGCTTCGTATACGAGGTACGAGGTTGTGCCGAGCTCATACGCTACGACACACGCGATACGCTCTTCTTCGAGCAACAGCAAAGTCCTGACCGTTGACCTTCCCAGCCCTGACTCTGGTATAGGCGCCGACGCGGTAACGCCCAGACAGGACCATCATCCAACCACGGCCCTTCATCAGtcCTCATTCGACTACACAGAATTATGTCCTGGTGGAACTGCCGGAACAGCGGTAGTTCTCGAAAGTGGAGCGGTGATACACCAACCCCTGCAATTACAGCTGCAGCAGAACCACGCACAAGCGCAGGTGCAACGCAGCAGCTTAGTGTCCGCTGGTGCGACAAATCCGAATCCGAATCCAAATCCGCAAAGATCGCGGCCTTGGCACGATTTCGGCAGACAGAACGACGCCGATAAGATCCAGATACCGAAAATTTTCTCGAATTACGGATTCAAATACCACTTGGAATCGCCGATCAGTACGTCGCAACGCCGCGAGGATGATAGAATAACGTACATCAACAAGGGCCAATTCTACGGAATCACATTGGAATATGTGTCCGATCCGGACAAACCGCTCCTCAAGGCAGGGCAGACAGTCAAGAGCGTAGTAATGTTGATGTTCCGGGAGGAGAAGAGTCCGGAGGACGAAATCAAATCTTGGCAGTTTTGGCACGGGAGACAACATTCTGTCAAACAACGGATTCTCGATGCTGACACGAAGAATAGCGTCGGCTTGGTGGGTTGTATAGAGGAAGTCGCGCACAATGCGATTGCCGTTTACTGGAACCCACTCGAATCGTCGGCAAAGATAAACGTGGCGGTGCAATGTCTCAGTACCGATTTCTCGAGTCAGAAAGGCGTGAAGGGTTTGCCACTGCATATCCAGGTCGACACATACGAGGAACCACCGCctcacacgcacacatatacgCCGCCTTCCCATCGCGGCTACTGTCAAATTAAGGTCTTCTGCGATAAGGGAGCAGAGAGAAAGACTCGGGATGAAGAGAGACGCGCGGCTAAGAGGAAGATGACAGCGACTGGTAGGAAAAAGCTCGACGAGCTTTATCACCCCGTTACAGAGCGCAGCGAGTTTTACTCCATGGTCGACCTGCACAAACCGCCTGTACTGTTCTCCCCACCGGCTGAACACGCCATCGATAAGTTTTCGACGATGGAGTTGTCGGGCTTCTacggtggtggcggcggcggcggcggcggggGAGGGGGTGACACCGATACCTCATCCCTCAGTAATGGTGAAGGTGGAGGATTGAAGGCGGGGGGTAGCAGCCCCTATCCACCGCCATGCGCCCGGCCGAGTCTACCGGCCCTCAAGTTCCACAACCATTTTCCGCCCGACAATCTCAGTAGCCTGCACGACAAGAAGGACTCGTTGCTGATGCAGGTGCAGGAATTGCAGGGCTCGGTGCTGCAGGGGGTGCAACAGACCGGCCTGGCAGGCTCGGTAGTGTCCAATGTCGGTAATCGGCTGCACCTGCAACAACAGCCGCCACATCTACGCCCAGCGGACGCCGAAGAACGCGTCATGCTTTACGTGCGTCAGGAATCGGAAGATGTCTACACACCACTGCACGTTACACCGCCAACAGTCCAGGGGCTACTCAATGCTAATTACGGCGAAAATTGA
- Protein Sequence
- MEGDWRAYCEHPLSVATAAMLNLQQQHQSAVTNHNDDPAASYVYEYYKLPEKTADVKLPPTHELWSTGVMGQKLLVQEAPGSGSASTNRMEGGEGAGGGELHHFLQYNQQSHSPNQSLQGGLPLPLSPQPLRHDGASSAGIVGVKREPEDLSSSRGGQQSSKRHKQTQPDSPTPPGMYHHHPHQLQVQQYGSPYDPYTSCSPRLQSTAYTSTSATGTGNATANPGGGLHQEATTVYVAGDALPPLASSSSASSLSTTTASYTRYEVVPSSYATTHAIRSSSSNSKVLTVDLPSPDSGIGADAVTPRQDHHPTTALHQSSFDYTELCPGGTAGTAVVLESGAVIHQPLQLQLQQNHAQAQVQRSSLVSAGATNPNPNPNPQRSRPWHDFGRQNDADKIQIPKIFSNYGFKYHLESPISTSQRREDDRITYINKGQFYGITLEYVSDPDKPLLKAGQTVKSVVMLMFREEKSPEDEIKSWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESSAKINVAVQCLSTDFSSQKGVKGLPLHIQVDTYEEPPPHTHTYTPPSHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTERSEFYSMVDLHKPPVLFSPPAEHAIDKFSTMELSGFYGGGGGGGGGGGGDTDTSSLSNGEGGGLKAGGSSPYPPPCARPSLPALKFHNHFPPDNLSSLHDKKDSLLMQVQELQGSVLQGVQQTGLAGSVVSNVGNRLHLQQQPPHLRPADAEERVMLYVRQESEDVYTPLHVTPPTVQGLLNANYGEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01406994;
- 90% Identity
- iTF_00765307;
- 80% Identity
- -