Ccot000904.1
Basic Information
- Insect
- Cyphomyrmex costatus
- Gene Symbol
- -
- Assembly
- GCA_001594065.1
- Location
- NW:109838-114801[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9 1.6e+03 -1.4 0.1 39 52 76 89 68 100 0.69 2 2 6.1e-08 3.4e-05 23.2 11.6 9 62 337 390 331 392 0.93
Sequence Information
- Coding Sequence
- ATGGAGACCGAACTTTTGAAGGAGCCCTGGGTATTCCCGCGCACAAAAGCAAATCTTATGAAAGGAGAGGAACCCGCGACACTTTCCGCCTGGGAAGAGGACTTTCAGGATCTGAGCAGTTGGTGCATGGATACGTTCCAGGGTCAATGCGATTTTCATATAGGTGAATCGACTACATTTAAACTATCAGATACAAAATACGAGGGTAACAGCGTTTCGAttgtaaaagagaaagagatgttAAAGGATGAGAAGTTGGATTTGAAAATGGATACCGTTAAGACGACTAAAGAATCAAATGACAATTGTCATTTGCTTCTATCTCCATCGGAACTCGTTAACGAATACggattaagatataataatgagGAGAACAATGCATCCAGTTCGTTGCTAATACCACCAGAATCTGTGGCTTCTAAGGCCACCTCGCCGAGCAAACAGCATGACGCAGATGTTAGCGCGCCGCTCCAACCCAGGAGTCATGATTTGGATTACGCTTGCTCGTCGACGCTTAACACCGTCGCAAATCAGCGCGAAACATGGGATGAATTACGCACCATCGAGACAACCGGTTCGGATACTTTCGACTTGTTGTCGTACCTTTGGGAGgATGAAATACGTTCAATGGAAAGTAATTTATCTACCGATTCTTCAGCGATGTTAAAAGTCAGACCGCACGCAacaacgtcgtcgtcgtcagtACGATCACTTACATCAACAAAGGTGAAAACGGAGGAGACCGACGAACCGATGCCACCTTCGCCACGTCGAAGGATGGAGACCCGCGCGACATCCCGGATGATCATGACCTCGTCCACGGCGAAGTCTCCCGTAACGTCATATCGAAGATCGGAGAGAACGAGGGCAGCGACtattaaaagtaaagagaAGGAGAGTGTTACTGTCACCAGCACAGAGACAAAGAATAACAACGGGAGGAAAAGATATTACGAGGAAAGCGACGACTCCGAGGAGGATGTCATTCTCACCCAATACAAGGAGTGCCGTGTGAAAAATAATGAGGCCTCGCGGAGATCACGAATGAACAAGAAAGCTAAAGAATCGGAAATGGCCAAGAGAGCGACCGAACTGGAAAAGGATAACAGGATACTGAAGATGAAGGTTGAGGAGCTGGAGAAGCTGGTGACGTCGATGCGTAACGCGTTATTACAATCTGctttaaagaaagaattttaa
- Protein Sequence
- METELLKEPWVFPRTKANLMKGEEPATLSAWEEDFQDLSSWCMDTFQGQCDFHIGESTTFKLSDTKYEGNSVSIVKEKEMLKDEKLDLKMDTVKTTKESNDNCHLLLSPSELVNEYGLRYNNEENNASSSLLIPPESVASKATSPSKQHDADVSAPLQPRSHDLDYACSSTLNTVANQRETWDELRTIETTGSDTFDLLSYLWEDEIRSMESNLSTDSSAMLKVRPHATTSSSSVRSLTSTKVKTEETDEPMPPSPRRRMETRATSRMIMTSSTAKSPVTSYRRSERTRAATIKSKEKESVTVTSTETKNNNGRKRYYEESDDSEEDVILTQYKECRVKNNEASRRSRMNKKAKESEMAKRATELEKDNRILKMKVEELEKLVTSMRNALLQSALKKEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01476697;
- 90% Identity
- -
- 80% Identity
- -