Ccot008891.1
Basic Information
- Insect
- Cyphomyrmex costatus
- Gene Symbol
- Atf2
- Assembly
- GCA_001594065.1
- Location
- NW:2417951-2421353[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-11 6.1e-09 35.2 9.1 2 65 312 375 311 375 0.95
Sequence Information
- Coding Sequence
- ATGACTGACTCGGAGAAACTCTTCGCTTGCTCCACATCGGGCTGCAACATGagcTTTACAAATGAAGATCAATTATCCgtacataaaaagaaacatgaCATGATGCTAAATCTTAACAATAATTCTAAGAGTGCTGGATTTGTCGCAGATCAAACTCCAACACCAAcaagatttttgaaaaattgcgaGGAAGTTGGTTTATTCCAAGATCTACAAAATGTAGTCAATCCTTTCGAAGAGACGTTTCGAAGGGCCGTTGAGGCTGGAAATACTGGCACACTTATAGTATCAGAGGCTGGAATAACAGATGATACGCTGCATACTCCTCATATTTTTCCCTATATATCAGATGTACTGCCTGCAAATAGTCAAATTCTTTCCGAAGACAACGTCGAAGTCCCTCTTGccgaaaaagatgaagagcagGAAAGCACTATAAAGACTGATGAATGCAacagtattaaattaagtacaaaCGAGACGCAGGAACTAATGAAAGATTCGACTGTTACGTCTGCGAAAGATGATACTCTCCCAGCTGATATTATTGCCTCAAATACGAATGTACCTATAGCGCCTAAGCTTTCACAGACACAATCTACGTCTCATTTGTCCATCAATGGTGAAGAGGTGCAGTTGTTATTGAAAACCGCGGATggtaaattaatacaattatgtgCGACACCGGTATTGGAGCCTTCTAACATATCGAATACTGAACAGCAAACCGTTATTATCAAAACTGAACCGGCTTTACGGTGCGCAATGAAATTGGAGCCCAAGAAAACTGTGATCTCAAGATTATCATTAGCAAAAATGAAGCTGAAACAATCTCTATCTAAGAACGCGCAGAATCAAAAAGCGACTGACGACTGTGCGAAAATGGATGTGACTGCCTCTGCGAAAAAGGAAGGTATCAAGAAAACGATCGATCAGCTTAAGAAAAAAGACATTCTGGAGCGCAATCGTGCCAGTTCTATGCGTGCAAGGGCCAAAAGAAAAGAGTGGATTCAAGAACTCCAAAGAACAGTAACCAATGTCAATGAAGCGAACACAGTCTTGCAGATGGAAGTGAAAACTTTACGCAAGGAAGTTGCGAGATTGAAAGCTCTTTTGTTGGCTCATAAAGATTGTCCGGTTACAAAGTCGATGCAAAAAGgAATAATTCTTGGACCCAAGATAATATCGGTAGATAATCCGGAGATACTTACGGTGCCGATATCGGCCAATGGCGTCCCTGTAAAACGGTCAGTCTCTTACACAACGGAGATCCCAAGTGTACCAACGAAAAAATCGATCATGTCAATTACGAAGAATCCGGTGATACTTCCGAAGATGGATTGCGGCACCGCGAATCTCGCGATTCCGAATGCGACGATCATAAAAACTCTACCAGCGTTGAAGATCGTGggtgttaatcaatttatgcCGGAGAAATCGGAGGTAACGAAACAGATACTGATCGTGCAAAATCAACCGAGAAAATTGTGCGAGGCTACATCTAGGCAGATTATTCAGATAAATCCGAATTACGAAGTAGAGAATGCGGCATCTAAAAGTACGGGAACGTAA
- Protein Sequence
- MTDSEKLFACSTSGCNMSFTNEDQLSVHKKKHDMMLNLNNNSKSAGFVADQTPTPTRFLKNCEEVGLFQDLQNVVNPFEETFRRAVEAGNTGTLIVSEAGITDDTLHTPHIFPYISDVLPANSQILSEDNVEVPLAEKDEEQESTIKTDECNSIKLSTNETQELMKDSTVTSAKDDTLPADIIASNTNVPIAPKLSQTQSTSHLSINGEEVQLLLKTADGKLIQLCATPVLEPSNISNTEQQTVIIKTEPALRCAMKLEPKKTVISRLSLAKMKLKQSLSKNAQNQKATDDCAKMDVTASAKKEGIKKTIDQLKKKDILERNRASSMRARAKRKEWIQELQRTVTNVNEANTVLQMEVKTLRKEVARLKALLLAHKDCPVTKSMQKGIILGPKIISVDNPEILTVPISANGVPVKRSVSYTTEIPSVPTKKSIMSITKNPVILPKMDCGTANLAIPNATIIKTLPALKIVGVNQFMPEKSEVTKQILIVQNQPRKLCEATSRQIIQINPNYEVENAASKSTGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01477340; iTF_01261635; iTF_00884812; iTF_00127207; iTF_00125670; iTF_00127943; iTF_00129486; iTF_00128724; iTF_00126461; iTF_01405447; iTF_01406987; iTF_01408813; iTF_01407923; iTF_01406263; iTF_00016460; iTF_00385039; iTF_01475951; iTF_00765297; iTF_00015157; iTF_00014492; iTF_01519992; iTF_01422681; iTF_01421319; iTF_01423402; iTF_01523131; iTF_01354384; iTF_01355074; iTF_01015574; iTF_00181086; iTF_00181739; iTF_01476694;
- 90% Identity
- iTF_01261635; iTF_00016460; iTF_00015157; iTF_00014492; iTF_01475951; iTF_01476694; iTF_01477340; iTF_00181086; iTF_00181739;
- 80% Identity
- -