Ccot004738.1
Basic Information
- Insect
- Cyphomyrmex costatus
- Gene Symbol
- ATFC
- Assembly
- GCA_001594065.1
- Location
- NW:2476125-2488949[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1 2.9e+03 -2.2 0.7 32 55 124 147 118 154 0.62 2 2 1.2e-13 6.9e-11 41.4 13.2 2 60 300 358 299 362 0.96
Sequence Information
- Coding Sequence
- ATGTCATTCAGTCCGGACCAGGAGATGTTGCTATGGAAGTACGAGCCGGTGTCCCGCAGTGGGACACCGTCCTTAGAAATTGATGATGATTGGCCTTTATTCGAAGATCAGTCTGTAGAAGCTTCTAACAATGCTGTGGAAGCTGTTATGTATGAAGACCATCCCTCCCGTGCACAAGTAGCAAAACagcttttagaaaaattagacGAATGGATTAAAGAAGAACCCTTCTCAGATTGGTTGGAGGAAAAGATAGACCTGCCCATATTTGAACAAATATCTCTTtctgaaaatcaaaataaatcacCGCTGTCGCCAGTTTACACCTCCGTTGTCTATCCGATTGTAACAAAGACATTGccgcaacagcagcagcaagaACAACAACATGATAACACACAAACTCTCTTGCAGGAATTCGAAACTGTTTTAGGTGACGTTGAAGCTTGTCATCAGATCGTTCCGCCAACCAGTTCAACGCTTACTCCTCCACAATCACCCCCGCATAAATCGGTCAATGTGGACACACAGCTGCTAGTCACTCTGCAGCCTATGCAATCGTTTACCAACAATCAACcgatatataacataattccAACAGAGCAATCACTATACGTGAGCAATATATCGCGTCAGTGGAATACTGACAACATAGACTCGCTAAGTCCGCTTGGCGGGGATGTTGCGAACGAGTTAGCAGTGGTGGACGAATACGTTCGCTCGCACACCAAGGATATACCGTCTCCCATAAGCCCATGCAGCTCCAATAGCAGTTCGACCGATGATTCCATTGACGATCCTGATTGGAGTCTCGAAACCGAGAAGAGAACTAGCCTGAAGCAAACAGTTCACGATTCTTCGAAACATCGCCATAAGCCGTATTCTCGATCGTCTCTTGAGGACAAGAAGGTGcggaaaaaagaacaaaataagaACGCTGCCACGCGTTATAGACAAAAGAAGAAACAAGAGATCAAGGAGATACAAGGAGAAGAACGTGAATTGATGGAGCACAACGAggagttaaaagaaaagatgaaGAACTTGCAACAGGAGATAAAATATCTGAAGGGATTTATGAGGGATGTGTTTAAAGCCAAGGGTGTTCTTGAATAA
- Protein Sequence
- MSFSPDQEMLLWKYEPVSRSGTPSLEIDDDWPLFEDQSVEASNNAVEAVMYEDHPSRAQVAKQLLEKLDEWIKEEPFSDWLEEKIDLPIFEQISLSENQNKSPLSPVYTSVVYPIVTKTLPQQQQQEQQHDNTQTLLQEFETVLGDVEACHQIVPPTSSTLTPPQSPPHKSVNVDTQLLVTLQPMQSFTNNQPIYNIIPTEQSLYVSNISRQWNTDNIDSLSPLGGDVANELAVVDEYVRSHTKDIPSPISPCSSNSSSTDDSIDDPDWSLETEKRTSLKQTVHDSSKHRHKPYSRSSLEDKKVRKKEQNKNAATRYRQKKKQEIKEIQGEERELMEHNEELKEKMKNLQQEIKYLKGFMRDVFKAKGVLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01475949;
- 90% Identity
- iTF_01261632;
- 80% Identity
- -