Ccot010226.1
Basic Information
- Insect
- Cyphomyrmex costatus
- Gene Symbol
- HLF
- Assembly
- GCA_001594065.1
- Location
- NW:1139161-1141528[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-15 1.8e-12 46.4 3.9 5 58 281 334 277 338 0.94
Sequence Information
- Coding Sequence
- atgataatggaAAACTATTACAAACTATATAACGAAAGGCATTCTGAACATTCGTCTGAGCAAAAGGACGATTCAGACTGTAATATGTTGGTGCTGGATCTATCACGCAAGAAGCGCGTGGCATCTACGTTATACGAAGCCGAAATAATTCAATCCATTGTTTCATCGCAAACTTTGCTTCCAAACACAAAGAagcaaaaatatcaagaaataaattttctagatGAAAATACACAAACTCCCGCGAGAAGTAGTGCCATGTTATCGCCATATTCCGAATCAAACTCGCCGAAAGAAACGAAGATTAGTTCAGtggattatgaaaataataatcaattaatacataccttaccacacacacacacacaacacgcATTGTCAAATACGTATGGTATTACACCACGTACAACAATGGTAACGCCTCCGCAGCCATCGCTACTTACATATCCAAACGAAGCCACGAATATGCCCGTAGCGGtaccaaaaatatatttaccgtATATAGAAACATCGCAATCttgtgtaataaataacgatGCCAGGAGAATCATTTCGATGCCAGCAGAATGTTCGACGTCGGATGCGAAACCATCAACGTCTTCGGATGTTACGAAGAAAACGCCAAGACCTTTCAAGGCCTATCCGAACAATTTGTTGTCTGTTATTAGTAACGACATTGACCATAATTCGAATGAGAACTACGTAAAGTTCCGTAAGACGGTACTTGAAACCTTTGAAAAAGGGAACAAACAGACATCAAATCCTAAAATGCGTCGAGTATCCAAGTCTGTTAGTAATCCTGGAGTGCCTACTAGTACTGTCGATGAGAAAGATGCTATATATtgggaaagaagaaaaaaaaataatgaagcaGCGAAGCGTTCGAGAGATGCTCGAAGAGCTAAAGAAGACGAGCTTGCAATCAGAACGAGTTACCTCGAATATGAGAATGCACGACTGAAGATGGAAATACGGACACTCAAGTTGGagatacaaaaatttcttCACTCATTTTAA
- Protein Sequence
- MIMENYYKLYNERHSEHSSEQKDDSDCNMLVLDLSRKKRVASTLYEAEIIQSIVSSQTLLPNTKKQKYQEINFLDENTQTPARSSAMLSPYSESNSPKETKISSVDYENNNQLIHTLPHTHTQHALSNTYGITPRTTMVTPPQPSLLTYPNEATNMPVAVPKIYLPYIETSQSCVINNDARRIISMPAECSTSDAKPSTSSDVTKKTPRPFKAYPNNLLSVISNDIDHNSNENYVKFRKTVLETFEKGNKQTSNPKMRRVSKSVSNPGVPTSTVDEKDAIYWERRKKNNEAAKRSRDARRAKEDELAIRTSYLEYENARLKMEIRTLKLEIQKFLHSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -