Ccot001091.1
Basic Information
- Insect
- Cyphomyrmex costatus
- Gene Symbol
- cnc
- Assembly
- GCA_001594065.1
- Location
- NW:3755-76399[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-15 1.8e-12 46.5 6.9 3 65 464 526 462 526 0.95
Sequence Information
- Coding Sequence
- ATGATTCACACACCGCAGTTTCATCATCCCCATCATCCACACCACCGCTCCTTCCAGggtCGCATGCCGTTCATGCGAGCGATGAGTATGGAACAGCGGTGGCAAGATCTCGCGTCTCTTTTATCCCTGCCAGGAGCACCGGACCACTTCGCACATCCAGCGCATCCTGGGTATCCAGGACACGGTATAAGTCACAGTCATTACGAGGCGCAACGTAACGTATTGCTCCATAATCCTACCTTAGCGCCTCCGGTCGGGGATCTCAATTCAACGGGACCTTACCACAATGTGGGTGGGACGTCGAATTTGGGTTCAGCTGTGGCAACATCGATGAATTTGACAAACAGTAGTGAGCCAATGGGTGCAGAGAGCGGAGCAAGTTACAAGTCTGAACCTAACGATATGATGTATTATCATACCCCGACGACAGATTCCATCAACCAAACAACTGACGGATTTCTTTCGTCTCTACTCAATGATGAGGACTTGCACCTAATGGACATGGCCATGAACGACGGCATGTATACCATGCGTATGTTGGACAATGGTAGCAACAATGCATCCGGACCCACCGGTGCAACGGCTTTATCAGGTGTCCAAACGACTGGCGGCACAACTTCGACGGCTACGGGTGTTACAACTTTACCTGGTGTAGCCGACGAAAGGATGGATGCTTCAAGCGATAGTGCTGTCAGTAGTATGGGTAGCGAACGCGTACCATCTTTGTCGGACGGCGAATGGATGGAAACTGGATCCAATTCCAGCCATACTCAAGCCGACTCCCATTACACTATGGATTATGCGAgCAAATATCGCATGCCATACGACTGCAGCTACTCAGTGTCCGCAAGAAATGCCGGCTCGCCAAGATGCCAAACCGAACGAGCAGTACCGCCAGTCGCACAGAAGAAACATCAAATGTTCGCCAAGCGATATTTTCAGGAACAAGGCACTTGCTCACCTTTAGGGGCTACCGCACACCCAACCACTCCGATGAAATATGACTATGATACGCATACAGTCGGAGCAGGTGCACCGGGAAATACATATTCTGGACCAATCGAGGGTGCGACCGGGCCGCagcaagaaattaaatacagTTGTAGCGTGGATTTCAGCCGTCATCAATCcggacGATCTGTAATAGAACATGTTCATCATAATCACACTTATCATTTACCTGCTGAGAGCTCAGGATCTCTACAACGTCCCATTTCTCGTGACAAGAAAGTCCGCAAAAGCGATGCGGAGGAACATCTAACGAGAGATGAGAAAAGAGCAAGAGCATTGAGTGTACCGATTGCAGTCAGTGATATCATCAACCTTCCTATGGATGAGTTTAACGAACGTCTCAGTAAATATGACCTCAGTGAAGCACAACTGTCTTTAATACGCGATATTAGAAGACGAGGAAAAAACAAGGTTGCCGCACAGAATTGTCGCAAACGCAAATTGGATCAAATCATGAATTTAGCTGACGAAGTGAAAGAGATGCGAGATCGTAAACTGAGGCTCGTTCGCGAGCGCGAGTTCATGATCGTTGAGAGACAGCGggtaaaagataaatttagtCAACTTTACCGTCATGTTTTTCAGtcttTACGGGATCCAGATGGTAATCAGTACCATCCATACGAATACAGTCTTCAACAGTCTGCAGATGGGAACGTTTTGTTAGTTCCCAGAAATCAGACGAATCCGCACCAGTCACGACAGTCTTCGATGGATCCGAAGACCAAACCTGATCCTGAGCACAAGGAATGA
- Protein Sequence
- MIHTPQFHHPHHPHHRSFQGRMPFMRAMSMEQRWQDLASLLSLPGAPDHFAHPAHPGYPGHGISHSHYEAQRNVLLHNPTLAPPVGDLNSTGPYHNVGGTSNLGSAVATSMNLTNSSEPMGAESGASYKSEPNDMMYYHTPTTDSINQTTDGFLSSLLNDEDLHLMDMAMNDGMYTMRMLDNGSNNASGPTGATALSGVQTTGGTTSTATGVTTLPGVADERMDASSDSAVSSMGSERVPSLSDGEWMETGSNSSHTQADSHYTMDYASKYRMPYDCSYSVSARNAGSPRCQTERAVPPVAQKKHQMFAKRYFQEQGTCSPLGATAHPTTPMKYDYDTHTVGAGAPGNTYSGPIEGATGPQQEIKYSCSVDFSRHQSGRSVIEHVHHNHTYHLPAESSGSLQRPISRDKKVRKSDAEEHLTRDEKRARALSVPIAVSDIINLPMDEFNERLSKYDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQIMNLADEVKEMRDRKLRLVREREFMIVERQRVKDKFSQLYRHVFQSLRDPDGNQYHPYEYSLQQSADGNVLLVPRNQTNPHQSRQSSMDPKTKPDPEHKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00879369; iTF_00216139;
- 90% Identity
- -
- 80% Identity
- -