Basic Information

Insect: Cynegetis impunctata
Gene Symbol: -
Assembly: GCA_030704885.1
Location: JARQZK010000860.1:105114-118527[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.015 4.4 10.1 1.0 1 23 143 166 143 166 0.97

2 23 0.019 5.7 9.7 2.3 1 23 172 195 172 195 0.98

3 23 0.0003 0.09 15.4 1.2 2 23 208 229 207 229 0.98

4 23 0.093 28 7.6 0.8 1 23 272 294 272 294 0.96

5 23 4.1 1.2e+03 2.4 1.6 1 23 300 323 300 323 0.75

6 23 0.021 6.3 9.6 3.4 1 23 335 357 335 357 0.96

7 23 0.0056 1.7 11.4 5.1 1 23 401 423 401 423 0.98

8 23 0.33 98 5.9 2.3 1 23 429 452 429 452 0.97

9 23 0.005 1.5 11.6 1.1 1 23 467 489 467 489 0.98

10 23 0.94 2.8e+02 4.4 1.7 1 23 495 517 495 517 0.93

11 23 0.0065 1.9 11.2 0.4 1 23 535 558 535 558 0.96

12 23 0.0054 1.6 11.5 3.9 1 23 564 587 564 587 0.98

13 23 0.012 3.6 10.4 1.8 1 23 597 620 597 620 0.95

14 23 0.022 6.6 9.6 3.7 1 23 665 687 665 687 0.99

15 23 0.0057 1.7 11.4 1.1 1 23 708 731 708 731 0.96

16 23 0.0019 0.55 12.9 5.2 1 23 737 760 737 760 0.98

17 23 0.012 3.5 10.4 2.6 1 23 771 794 771 794 0.97

18 23 0.0064 1.9 11.3 2.6 1 23 808 830 808 830 0.98

19 23 0.076 23 7.9 0.3 1 23 836 858 836 858 0.98

20 23 0.64 1.9e+02 5.0 2.1 2 23 866 888 865 888 0.95

21 23 0.49 1.5e+02 5.3 0.7 1 21 894 916 894 920 0.91

22 23 0.00032 0.095 15.4 0.5 1 23 947 970 947 970 0.96

23 23 0.017 5 9.9 3.8 2 23 977 999 976 999 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.015	4.4	10.1	1.0	1	23	143	166	143	166	0.97
2	23	0.019	5.7	9.7	2.3	1	23	172	195	172	195	0.98
3	23	0.0003	0.09	15.4	1.2	2	23	208	229	207	229	0.98
4	23	0.093	28	7.6	0.8	1	23	272	294	272	294	0.96
5	23	4.1	1.2e+03	2.4	1.6	1	23	300	323	300	323	0.75
6	23	0.021	6.3	9.6	3.4	1	23	335	357	335	357	0.96
7	23	0.0056	1.7	11.4	5.1	1	23	401	423	401	423	0.98
8	23	0.33	98	5.9	2.3	1	23	429	452	429	452	0.97
9	23	0.005	1.5	11.6	1.1	1	23	467	489	467	489	0.98
10	23	0.94	2.8e+02	4.4	1.7	1	23	495	517	495	517	0.93
11	23	0.0065	1.9	11.2	0.4	1	23	535	558	535	558	0.96
12	23	0.0054	1.6	11.5	3.9	1	23	564	587	564	587	0.98
13	23	0.012	3.6	10.4	1.8	1	23	597	620	597	620	0.95
14	23	0.022	6.6	9.6	3.7	1	23	665	687	665	687	0.99
15	23	0.0057	1.7	11.4	1.1	1	23	708	731	708	731	0.96
16	23	0.0019	0.55	12.9	5.2	1	23	737	760	737	760	0.98
17	23	0.012	3.5	10.4	2.6	1	23	771	794	771	794	0.97
18	23	0.0064	1.9	11.3	2.6	1	23	808	830	808	830	0.98
19	23	0.076	23	7.9	0.3	1	23	836	858	836	858	0.98
20	23	0.64	1.9e+02	5.0	2.1	2	23	866	888	865	888	0.95
21	23	0.49	1.5e+02	5.3	0.7	1	21	894	916	894	920	0.91
22	23	0.00032	0.095	15.4	0.5	1	23	947	970	947	970	0.96
23	23	0.017	5	9.9	3.8	2	23	977	999	976	999	0.94

Sequence Information

Coding Sequence: ATGGAAAAGGAACGATCTTGGGAAAATGATGATGGTTTCATTACTGTTGTTAAAACTGAACCGGAAGATTTTTTATGTGTAGAATACAATGAATCGAATGAtcAATCTGAAATCCTTAATTTTGGAAGTGAAGATGATCCTCCAGATGAAGCAAATCAGTATGAGAATTCATCTATATCtgaagaatttcatttcaaacaagAAGACATTGATAATGGTGAAGTTATGGATTATAGAATGGAAAGTTACCAGGGTGAACAGTTTCATCCTCATGTTTATCCGCAAGGGGCAGCTAATAGTATGGAAGAAACGGGGCAATGGCAATATAGAAATGGATTCAGTCCGTCAGAAACAGATCAAGGATTCTTGGATCAACCAGGAACTTCGGATATGAACCTGTTTGCTGAGACACGAGAAGAGCAACTTTACCCTTGTCGTTACTGCGAGTATGTAGGCAATCATCCAAGATTGTTAAGTTCTCATATGAATAATCGTCATACTAAATCTGTAGTGTATCAGTGTCCCCATTGTCCTTATAATTCGACCATTTCCAGGAGTACTAAAGATCACATAAGGACTAAACATGAAAACGAAGATGAAAAGgcgattgaaataaaaaaaaaatgtgagttttgtgattattctgCAAGTAATTctactgctttaaaaaatcACATGAATAAACACACAAAGGAAAAACAACATCAGTGTTCCTTTTGCGATTTCAACACTCTTTGGGAAGGATATTTGAAAATGCATATTAGACGAAAACATGGTGATCAAACTATGGAATCAAGTAGTTCAATGAAGGAATACCCTTGCCAGTATTGCAGTTACAAAGCCTTAACCCCAAGCTCTCTCAAACTTCACACAAATAAACATACTAGAGAACAAGAACACCAATGTCCTTATTGTCCTTATAAGACGGTTTGGACGACTTATATAAAATTACATATCAAAAACAAACATCTGAAAGGCGAAAAGTCGCCATCTAGCAAAGAACACGCTTGTAGCTTTTGCGACTACAAAGcgaaaaatacaactttactgaaACAGCATATGAATAAACACACCCGGGAAAAAATCAATCAATGCCCACATTGCCCATTTACTACTCTATGGATCACTTATATGAAACTTCACATAAAACGGAAACATACAGTTAAAACCGAAGGCGAGACCACCACTGAGAAAAGAGATTTTCAATGTCACTATTGCTCCTATAAAGCTATCAGCTCGAGTCACttaaaaatacatgaaaataaACACACCAAAGCTGTGGAATATAAATGTGAAGAGTGCGATTTTAAAACAACTTGGTATGGATATTTAAAGCTTCACACTAAAAGAAAACACTCGATCAAAGTGAAAGAAGAGAATCCAAGTACCAAAACGACGTATCCGTGTAAGTTTTGTTCTTATAAAGCTATAAATCTGAGCACTCTGAAGGTTCATCAAAATAAACACACTAGGGAAGTTTTATACAATTGCCCACATTGTGATTTTAAAACCACTTGGAGAGCTTACATCAAGATGCATATTGAAAAGCATAACGTTCAGAATTTCAAATCGAGAAAGCAAAAGTACGAAGGAATTAGATCTTTTCCTTGTCAGTATTGCGATTATAACGCTACCCAATTGGGATCACTGAAGCTACATGTAAATTCTAAACACACGCGTAAAGTATTGCATAAATGTCCTAAATGTGAATATCAGTGTGCAGTTTAcggaaatttaaaaatgcacaTCAGGCGGAAACACGGTCTAAAGCCAGAAGCCGATGGAAAATATCATTGTAAAGAGTGTGAATTCAACTCGGAAAATTCTAGTGACTTGAAGATTCATTTAAACGAGAAGCATGATGTTAAAATCGAAATCGACGAAATAAAAAAAGAGAACGACAAAGTTTATTCGTGCCAACATTGTTCTTATCAGACACTATATCCGCAAGTTATGGAGAAACACATCAATAAACACACTAGGCAAAATGTATTTAAATGTCCACATTGCCCATACACAACGGTTTGGAATCATTATATGAAAGTACACATTAGGAGACATAGCGAACCTAAAACTGGTAGACAGAGATTCACTAGACCAAATACTGATCAAAATAGAATGTTTCCTTGTCAGTTCTGCGACCACAGAAGTATATCTAGTAGCAGTTTGAGAGATCATGTTAATTCTGTGCATACGCGTGAAGTTTTTTTCAAGTGTCCATACTGCGAGCATAAATGCACATTGAAAGGTAATTTGAGGGGACACATTCGAAGAAAGCATCCAGCTGAATTTGTCGAAACCGAAAAACGTTACCCTTGCAATCATTGCGATTTTAAGACTTCTCTAatgagaaatttgaaaattcaccagAAGAATGAACATAATATAGATTATATTCCCATTAAAACTGAGAATGGTGAGTTCCCGTGCCAACATTGCGATTATAAGGCAAGAAGTTACTATGCACTTAAAATTCATACGAATAAACATACAAAAGAAAATTCTTACCGTTGTCCCGAATGTGAATTTGAAACAAGGTGGCCTAACTATCTTTCAAAACACATTCAGCAACATAGTTTAAACAAGAGAAAAGTTACTTGCTTATATTGCGATTATAAAGGATGTTCTACATTCAGATTGAGAAAACATATAGAAAGCCTTCATAAAGTAGATAAACATTACCCTTGCCCGAAACCTAAATGTGAATTCAAAACTATACACTATACTAGTTTGAGAATTCACTTGAAAGGTAATATACACGCAGATGGTAGGAGGAAATCTAACACGAATGTGAcgagaaatttttcatataagtaTGAGCCTAATGAAGGTCGATATTTCGCATGTGACTATTGCGATTATGCCTCCAAAACGCAGGGAAATCTGGATTtgcatatgaaaaataaacaccagaaaaaatcattattgaaaTGTGGCATGTGTCATTATAAAACTCCTTCCAAAAGCTATCTGAATCGGCACTTCAAATTGAAACATGCAATGAAAATGGAAGTTGAAGGATTCACAGATGAAGCGAAAACCAGGATTGAGATTGTCGAGAAGGAGGAGACCTTCGTGAAAGAAGAGCCCGAACATTTCGTATCCGATCTCGTCGAATGTGAATTAAAAGAGAACGTCGTTGAAACAAGACGTTGTAACCGGCAAAGGAATTCAATTCCATCATATTTAGAAAACGAGAcagaggaagaaataagttCAGATGCAAATGATTTCAAGGAAGAAGTATTCGATATAGTTCCTACGAACAAAGCCGATAATGTTGAAGTATTAGCGGAAATTCAAAGGAAGTCGGAAGATTTGAAAAGTGACAGTGCAATTGCGGATATTCAAAACACTGACGGGGGAGCAATCAAGCAAGTACTTCGAAATGAAGAGATGAAAGGTGCCAAAGCCGGAAATCAAATTCAAGATAAAGTACGAACTGAAGATACTACAAATTTCAACCTTCATAGTGTTCAGAATTCTGGAAAATGGCCCATTGCAACTCAAATAAATCGTAGACATAGAAGAATTAAATTAACTCCAAGAAGAGTACTTGAAAAAAATGTATCATACCAAAATACAGCTACTGTATTACACAATAGTAATTCGTCAACCTGTAAAGTGCCCGAAACAACTAATCCTGAAATGGTGGCGATTTTAGAACCTGCAAGCAAtacaaaaatgtcaaataaCATTAATGAATCCGTTGAAAGTGAGCATATAGTTGTTGAACCAGAAATCTTGAATCTTGAATTAATAGACAACTATCAAGATGTGATTCAGGATCTTggaagaaataatataaaaaaactgaatatcGATAATACTGATATGTTGAGTGATAAAACAATGGACCCCTCATTAAGTGATTGTGACTATGGAACCAGTGAAGTAAAGTTTCTGAATCCAGAAGAAACTGAAGATATAGAAAACTTGgcattgaaaaattctggtgaAAAAACGCCAGAATCATATAAAGGTAAAGATCTACCTGATACAGAAGCAGAACAAAGTACCATGTTGGATATTGTGTCAAGAGAGGATAAAGTTGAAACAATTGAGAAAGTTCAAGGCACATCTATGCAAAAAATGAACagtgaaattgaaaaaagtagTTTGAAAGGAGAATCAATCGAATTAAAACAAGTATTTGGAGAAAAAGGTATGAGAGAAGATACAATTGAACCCATGTAG
Protein Sequence: MEKERSWENDDGFITVVKTEPEDFLCVEYNESNDQSEILNFGSEDDPPDEANQYENSSISEEFHFKQEDIDNGEVMDYRMESYQGEQFHPHVYPQGAANSMEETGQWQYRNGFSPSETDQGFLDQPGTSDMNLFAETREEQLYPCRYCEYVGNHPRLLSSHMNNRHTKSVVYQCPHCPYNSTISRSTKDHIRTKHENEDEKAIEIKKKCEFCDYSASNSTALKNHMNKHTKEKQHQCSFCDFNTLWEGYLKMHIRRKHGDQTMESSSSMKEYPCQYCSYKALTPSSLKLHTNKHTREQEHQCPYCPYKTVWTTYIKLHIKNKHLKGEKSPSSKEHACSFCDYKAKNTTLLKQHMNKHTREKINQCPHCPFTTLWITYMKLHIKRKHTVKTEGETTTEKRDFQCHYCSYKAISSSHLKIHENKHTKAVEYKCEECDFKTTWYGYLKLHTKRKHSIKVKEENPSTKTTYPCKFCSYKAINLSTLKVHQNKHTREVLYNCPHCDFKTTWRAYIKMHIEKHNVQNFKSRKQKYEGIRSFPCQYCDYNATQLGSLKLHVNSKHTRKVLHKCPKCEYQCAVYGNLKMHIRRKHGLKPEADGKYHCKECEFNSENSSDLKIHLNEKHDVKIEIDEIKKENDKVYSCQHCSYQTLYPQVMEKHINKHTRQNVFKCPHCPYTTVWNHYMKVHIRRHSEPKTGRQRFTRPNTDQNRMFPCQFCDHRSISSSSLRDHVNSVHTREVFFKCPYCEHKCTLKGNLRGHIRRKHPAEFVETEKRYPCNHCDFKTSLMRNLKIHQKNEHNIDYIPIKTENGEFPCQHCDYKARSYYALKIHTNKHTKENSYRCPECEFETRWPNYLSKHIQQHSLNKRKVTCLYCDYKGCSTFRLRKHIESLHKVDKHYPCPKPKCEFKTIHYTSLRIHLKGNIHADGRRKSNTNVTRNFSYKYEPNEGRYFACDYCDYASKTQGNLDLHMKNKHQKKSLLKCGMCHYKTPSKSYLNRHFKLKHAMKMEVEGFTDEAKTRIEIVEKEETFVKEEPEHFVSDLVECELKENVVETRRCNRQRNSIPSYLENETEEEISSDANDFKEEVFDIVPTNKADNVEVLAEIQRKSEDLKSDSAIADIQNTDGGAIKQVLRNEEMKGAKAGNQIQDKVRTEDTTNFNLHSVQNSGKWPIATQINRRHRRIKLTPRRVLEKNVSYQNTATVLHNSNSSTCKVPETTNPEMVAILEPASNTKMSNNINESVESEHIVVEPEILNLELIDNYQDVIQDLGRNNIKKLNIDNTDMLSDKTMDPSLSDCDYGTSEVKFLNPEETEDIENLALKNSGEKTPESYKGKDLPDTEAEQSTMLDIVSREDKVETIEKVQGTSMQKMNSEIEKSSLKGESIELKQVFGEKGMREDTIEPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -