Basic Information

Insect: Cynegetis impunctata
Gene Symbol: Hivep1
Assembly: GCA_030704885.1
Location: JARQZK010000046.1:39071-51677[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.4e-07 0.00013 24.3 0.6 1 23 193 215 193 215 0.98

2 14 0.00026 0.078 15.6 2.3 1 23 221 244 221 244 0.96

3 14 0.0029 0.86 12.3 2.1 1 23 254 277 254 277 0.97

4 14 2.5e-06 0.00076 21.9 0.4 1 23 349 371 349 371 0.98

5 14 0.016 4.8 10.0 1.0 6 23 381 398 378 398 0.96

6 14 0.0049 1.5 11.6 1.6 2 23 405 426 404 426 0.98

7 14 0.00041 0.12 15.0 2.7 1 23 480 502 480 502 0.98

8 14 3.9e-06 0.0012 21.4 1.0 1 23 508 530 508 530 0.98

9 14 0.39 1.2e+02 5.6 5.5 1 23 536 558 536 558 0.97

10 14 1.6e-05 0.0048 19.4 1.6 1 23 899 921 899 922 0.96

11 14 0.00027 0.082 15.6 5.4 1 23 929 951 929 951 0.98

12 14 1e-05 0.0031 20.0 1.5 1 23 957 979 957 979 0.97

13 14 3.1e-05 0.0094 18.5 2.2 1 23 987 1009 987 1009 0.98

14 14 0.33 98 5.9 9.5 1 23 1015 1038 1015 1038 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.4e-07	0.00013	24.3	0.6	1	23	193	215	193	215	0.98
2	14	0.00026	0.078	15.6	2.3	1	23	221	244	221	244	0.96
3	14	0.0029	0.86	12.3	2.1	1	23	254	277	254	277	0.97
4	14	2.5e-06	0.00076	21.9	0.4	1	23	349	371	349	371	0.98
5	14	0.016	4.8	10.0	1.0	6	23	381	398	378	398	0.96
6	14	0.0049	1.5	11.6	1.6	2	23	405	426	404	426	0.98
7	14	0.00041	0.12	15.0	2.7	1	23	480	502	480	502	0.98
8	14	3.9e-06	0.0012	21.4	1.0	1	23	508	530	508	530	0.98
9	14	0.39	1.2e+02	5.6	5.5	1	23	536	558	536	558	0.97
10	14	1.6e-05	0.0048	19.4	1.6	1	23	899	921	899	922	0.96
11	14	0.00027	0.082	15.6	5.4	1	23	929	951	929	951	0.98
12	14	1e-05	0.0031	20.0	1.5	1	23	957	979	957	979	0.97
13	14	3.1e-05	0.0094	18.5	2.2	1	23	987	1009	987	1009	0.98
14	14	0.33	98	5.9	9.5	1	23	1015	1038	1015	1038	0.94

Sequence Information

Coding Sequence: ATGGGGGACAAAATTATTCCATGGGCATCGGGGTCCAAAAACCTGGGACTGATGTTAGATGTAAATTTGAGGTTTACGGGACATATAAATATGCTTCTGAAGAGAACTTTCGTGAACCTTAAGTTAATATATGGATGTAGGGAACTCTTGAACCAAAGGCAATTGAAATTACTTTGTGATGCCTTGGTGTTGTCACACTTCAACTTTGCTGATATTGTATATGGCCCTTGCCTCTTGAAGACTGATGAAATGAGAGTACAAAGGATTCAGAATAGTTGTATCCGAGTGATATATGGTCTCAAAAGAAGAGATCACATGTCTCACAAACTCGCTGAATTGAGGtggctgaatatgaaaaataggagGCGTTTACATGTGTCATGTTttacattcaaacttttaactGAAAAAAAGCCGGTGCACCTCCATAGGAAAATTAGATTCAGATCTGATATTCACAATTCAAATATAAGATTTAAGAACAGACTTGCTATTCCTCGTTTCAACATTTCTCTTTTTATACGTTCCTTCTCATACATTTCAGTAGCTACAATGAATAGTATACCAGAGAACTTTTTTGTTtgcaCGATATGCGATAAAGGATTCACACAGAAAGGAACTCTTCAGATACACATGACAAAACATTCTGGTATAAAACCATTTTGTTGTACTTTATGTCCGGCAAAATTCAACCAAAAAGGTAACCTGAAAGTACATGTTCAAAAAACGCACACTGCAACAACAgaagatgaaaaaatatttaagtgtTCCCAATGTGATTGCATTTTCAAGAAGGTAGCGTCATTGAATGGTCATATGACTAAAATTCATGCAACTGATACTGCAGAAATAAGCATAGCATCCATAATTGATCAACCAAAGAATAATAAGCGATTGGTTGGGAATTCAGATTTGCCAAATTCGATCATTCCACAATCCACTGATAATAAGTTGGAAGTAGATGTTGCAGATGAATTACCTCAGAGTGATAAAATTTCTAAAATCTAttcattgaaacaaaaatttctaggcaCATCTAAGGTCTATATATGCTCTTATTGTGATAAAGAAATTAAGAAACCTTCAGATTTGATAAGGCATTTAAGAACACATACAAAAGAAAGACCGTTTAAGtgtTTTTGTGGCAATTCATTCTCTATAAAATCAACACTTTTGACACACATGCAGATTCATAAAGGAAATATTGGGAAGAAATGTTCCAAGTGTTCAAAAGTGCTCTTTTCACAAAAAGCATGGAATGCACATTTGAGaaaacaTGATACATCTTTACAAACTTCTATTTTGAAGTCTCACAATCACCGAAatttccaTGGAACTAAAGAACAGCTAAATGAATcagaaaaatcttcaaatgaGTCATCAGTGTCATTTCTGAAGAAAGTGAAACGTACTCAGTTGCATCCTGGGGAGAGAAAATATAAGTGTCGTGTATGTCATAGaTCGTTTGGTACTCCATTTTCAATTAAAGAACATATGAAATTACACAATGAAGCCCGAAAATTTGAATGTGGAACATGTGATAAAACCTTCTTTAGTAAACCTCTACTGAAGCGGCATATGTCAATACATAATACATCGAAGCCTTATGAATGTTTTTACTGTAGGAAGAAGTTTAAAAATATGTTAATGTGTGGTAGACATATAAGAACTCATGAAAATAATGGTGATAATGTTAAACAGGATATACTGAGGGCATCAATTTGTTATGTGGAAGATACAGTTCCAACACATCAAACTACACCAAATGTTTCTGAGTCAACGTCCCTATTGGAAGTGAACCCGAATGAAATTCTTGACAATTTATTTGATAGTGATCCCCAAAAAATAACCGTAGAAAGTGATAACGTAGATTTCactgaaaatgttgaaaaattcacACCTTCTAGTACAAGTAACACGCTCGAATTTGAAAGAAATGAAGACTTACAAACATTTTTTGTGGATTGCTCTACAGATGATCACGAGGAAGATGGATTGCCTAATAATTTCTTTTCTCATTTGGATCTACAGccTAGTAATATAATAGATCTGGACTGTGTGAATGAAATGCAACAGTCTCCAATTGTATTCAATGTTCAGAACATAATCAGCGAAGGGGCGTTACCTGCTGTAGATATGATGAATAGTGAGTTGTATATAAACGACACCTCTGGACCAactgaatctcaaaaacctAAATCATTACTTAAAAACGTACAGAAAGCTACGACAAGTGCCTTAAGTAATTTAATTTGTATACCGAATGATATCAGCGATAATTTCTTAGccaataatatttcattatatcctAATACACGAATTGGTTTCGATAAATCTTCTGAACTAAATTCTACAATTCCATCAAATGTAATTACATCACAGGAGGACATATTCTTGAAAGAGACAGAAAACGCAGAAAATAATACTGCAGAAGGTTTGAATGTCATAAGTGTTTCCTTCAAAGAATCTGGAGGTGGTACTGgtaatttgaatataatacatTGCTCAGCTTGCAAACGACTATTTGAGAATATGGAATCTTACGAGTCTCACTCTTGCTTCAAatcagttttgaaaaaaaatcactttaacgAATCTGTTGATTCAGAAAGTACGAAACCGGCTGTTGATAACCAAGATAATAAAAAATCGTCAAAACCCGAAAGCATATCTCAGAAACCTGCGAAGAAAAATTTTCGCTGTGTTTATTGTGGAAAAGAATTCAACAGTAGAGGTGCATATATAAGACATGCTAATACAcatcacaaaaattttgatgggATGCATAAATGCAAGTTTTGTATAAAGAAGTTTAAGAAGCCATCAGATttgAGTCGTCATTTGAGAACTCATACTGGAGAGAAGCCTTTTGCGTGTGATAAATGTGATAAGAAATTCTCGCTCAAATCTACATTAGAAGGGCATTATAGGACTCATAATCCCGGAGCAACCAAAGATTTTGTCTGTGAAGTTTGTAATTCCTTCTTTACTTCGAAATCGAGTCTAAAAATTCATATGCACGTCCATActgGTATAAAGCCTCACAAATGCAACTATTGTGATCAGCATTTTAGAACCTTAGCTCATAGAAGAAGTCATGAAcacaaaattcattcaaattgcTCCATAACAAATAGTCAGAGTAAATTCAAACCATCTATAGATCCTTCAAAACTTAAAACCATTGTTGAAGAAGGTCAGAAATCAGAACTGCGAGAAATTAGTGAATCAACGGAGATTAAGAATACAGAAACCACGTTAACTCTAGATCGCTTTGTAGCTTTTTTATCGCTACACTATTTAAAACCTACAATGTTACTGACATGA
Protein Sequence: MGDKIIPWASGSKNLGLMLDVNLRFTGHINMLLKRTFVNLKLIYGCRELLNQRQLKLLCDALVLSHFNFADIVYGPCLLKTDEMRVQRIQNSCIRVIYGLKRRDHMSHKLAELRWLNMKNRRRLHVSCFTFKLLTEKKPVHLHRKIRFRSDIHNSNIRFKNRLAIPRFNISLFIRSFSYISVATMNSIPENFFVCTICDKGFTQKGTLQIHMTKHSGIKPFCCTLCPAKFNQKGNLKVHVQKTHTATTEDEKIFKCSQCDCIFKKVASLNGHMTKIHATDTAEISIASIIDQPKNNKRLVGNSDLPNSIIPQSTDNKLEVDVADELPQSDKISKIYSLKQKFLGTSKVYICSYCDKEIKKPSDLIRHLRTHTKERPFKCFCGNSFSIKSTLLTHMQIHKGNIGKKCSKCSKVLFSQKAWNAHLRKHDTSLQTSILKSHNHRNFHGTKEQLNESEKSSNESSVSFLKKVKRTQLHPGERKYKCRVCHRSFGTPFSIKEHMKLHNEARKFECGTCDKTFFSKPLLKRHMSIHNTSKPYECFYCRKKFKNMLMCGRHIRTHENNGDNVKQDILRASICYVEDTVPTHQTTPNVSESTSLLEVNPNEILDNLFDSDPQKITVESDNVDFTENVEKFTPSSTSNTLEFERNEDLQTFFVDCSTDDHEEDGLPNNFFSHLDLQPSNIIDLDCVNEMQQSPIVFNVQNIISEGALPAVDMMNSELYINDTSGPTESQKPKSLLKNVQKATTSALSNLICIPNDISDNFLANNISLYPNTRIGFDKSSELNSTIPSNVITSQEDIFLKETENAENNTAEGLNVISVSFKESGGGTGNLNIIHCSACKRLFENMESYESHSCFKSVLKKNHFNESVDSESTKPAVDNQDNKKSSKPESISQKPAKKNFRCVYCGKEFNSRGAYIRHANTHHKNFDGMHKCKFCIKKFKKPSDLSRHLRTHTGEKPFACDKCDKKFSLKSTLEGHYRTHNPGATKDFVCEVCNSFFTSKSSLKIHMHVHTGIKPHKCNYCDQHFRTLAHRRSHEHKIHSNCSITNSQSKFKPSIDPSKLKTIVEEGQKSELREISESTEIKNTETTLTLDRFVAFLSLHYLKPTMLLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -