Basic Information

Insect: Cynegetis impunctata
Gene Symbol: -
Assembly: GCA_030704885.1
Location: JARQZK010000740.1:300588-314116[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.1e-05 0.0092 18.5 0.7 1 23 138 160 138 160 0.95

2 15 0.0014 0.41 13.3 1.2 3 23 168 188 167 188 0.99

3 15 0.00011 0.033 16.8 0.1 1 23 285 307 285 307 0.98

4 15 0.064 19 8.1 0.5 1 23 313 336 313 336 0.97

5 15 9.3e-07 0.00028 23.3 4.1 1 23 360 382 360 382 0.98

6 15 0.005 1.5 11.6 0.0 1 23 395 417 395 417 0.94

7 15 4.4 1.3e+03 2.3 0.7 1 12 423 434 423 446 0.80

8 15 0.21 62 6.5 1.2 2 19 454 471 454 472 0.95

9 15 0.00026 0.077 15.6 4.5 1 23 481 503 481 503 0.98

10 15 0.0054 1.6 11.5 0.2 2 23 509 530 508 530 0.96

11 15 9.9e-06 0.003 20.1 0.4 1 23 538 560 538 560 0.98

12 15 0.0043 1.3 11.8 0.2 3 23 568 588 566 588 0.97

13 15 0.00014 0.041 16.5 0.3 1 23 594 616 594 617 0.95

14 15 0.04 12 8.8 1.5 1 23 631 653 631 653 0.96

15 15 0.0016 0.47 13.2 0.0 1 20 1054 1073 1054 1076 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.1e-05	0.0092	18.5	0.7	1	23	138	160	138	160	0.95
2	15	0.0014	0.41	13.3	1.2	3	23	168	188	167	188	0.99
3	15	0.00011	0.033	16.8	0.1	1	23	285	307	285	307	0.98
4	15	0.064	19	8.1	0.5	1	23	313	336	313	336	0.97
5	15	9.3e-07	0.00028	23.3	4.1	1	23	360	382	360	382	0.98
6	15	0.005	1.5	11.6	0.0	1	23	395	417	395	417	0.94
7	15	4.4	1.3e+03	2.3	0.7	1	12	423	434	423	446	0.80
8	15	0.21	62	6.5	1.2	2	19	454	471	454	472	0.95
9	15	0.00026	0.077	15.6	4.5	1	23	481	503	481	503	0.98
10	15	0.0054	1.6	11.5	0.2	2	23	509	530	508	530	0.96
11	15	9.9e-06	0.003	20.1	0.4	1	23	538	560	538	560	0.98
12	15	0.0043	1.3	11.8	0.2	3	23	568	588	566	588	0.97
13	15	0.00014	0.041	16.5	0.3	1	23	594	616	594	617	0.95
14	15	0.04	12	8.8	1.5	1	23	631	653	631	653	0.96
15	15	0.0016	0.47	13.2	0.0	1	20	1054	1073	1054	1076	0.94

Sequence Information

Coding Sequence: ATGGAAGAGTCATTCTCCCTAACTTGGGAGGATTCTGGTACTGTCGTCCAAAATGAAGAAGTTATATGTGGTATTGAGGAGACAGAAATAATACCAGGGCAAACGGAAGAATTCAGGGGTACTGAAGACATTCCCCAAAATGGTCAAGAAATGCAAGGTGGTAATATTATGTATCTAACAGAAGATAATGTTCTTGTAATGCAGGAGTCAAATGAGAATGCTTTTCCTCAACACTTTATGGACTGTCAGGTTACTGAAGAAGTGGTCGCAGAACAATGGGAGGAAAACTGCCCAGAAGAAATTGTGGTAGGTTCAGAAGAAGCCATAGGAATCTCTGGGGAGCAAGAATCCGCTGAAGATGTGGAAATTCCGCTTCCAACTGACCAAGATGAGTACACTGCTGCAAGACCATACCCGTGTGATTTTTGTAGTCGAAGATTTAGAAAAAAAGCTAATCTGATGAATCATATGGTTGCTCATCAAACAGATAGACCTCATGGGTGTAATTTATGTGGGGTAAGATATATAAGGAAATGTGATCTTATGAATCATCTGAAAATCCATGCATATATAcctgaaactgaaaatttagatgaagAAGAAATGCAGCCACTAGATGATTCCGACTCGGATAAATACCGAAAAAATCGAAgaactttcaataaaaaacgtaaaaAGCAAAAGATTAAAGAGGAATTTGAGCATTTTGATACAGATGAAATGGCTGCTTCTAGTTCTAGAAACTATTACACTAATGAGGAACTGATGGACGTTAAAAGTTTTGAATATCTACCTTCTGATAACAGCCAATCTGAAGAATTAAGATATCCAGTAACTGACCATAAGAAACCATTTGTTTGCCAACATTGTGGAGTAGGTTTTGCAAGAGAAAAAGCTCTTGCTTCCCATGCTCGGGTGCACGGTGGAGATTCTCCTTTTGAATGCCAGAAGTGCAATGAGATGTTCTGGGACATGAATGCAATGAGAGAACACTGGCGAACTAAACATGGTGGCCTGGAGgattatgatgatgatgaagatgaAGATTATTCAGAAGAAGATCACAAGTATGGAACCTTCTATTGCACTACTTGCGGTTTATCTTTTCATCGGCAAGATAACCTCAAGAGGCACCAGCGTGTACATGTGAAGGATGAGCTGATGAATCAACCAGAGATAGGACATATTTGCAACGTATGTGGTGAATCGTTTCCAGAAGCTTTGGATCTTCTGGCTCACGCAGAAATTCACGCGCGAAGTTCAGAACACCGCTGCATGATCTGTGGGGAAGATTTTGAAGACGACCAAGGTTGCGCTGTTCACGTACAAGAGAAACATGGTAACGATCTACCACCTAATACTTGTATGCTGTGTGGAAGGCAGTGTAAAGACCGCAGAGCGTTATTAAAGCACTCATGGGAGCACTCTAAGGAAAAAGTTTTCTCTTGCTCTAAATGTGCTAAAACTTTCCACAATAAAGCAAGATTGAAAAGGCACATGCTATCCCATCGGAACAAAGTTGTTCCCTGCGATGTTTGTGGTGAGGAATTCCCGGACGGCAGGACACTAATGAATCATCGTCACAGCCATAGTAGCGTATCTGGAAGACAGTTTCCGTGTAGAGAGTGTGGGAAAACTTTTGGATCCAGAAGTTCCCAGCAGATCCATATACGAATACACACAGGGGAGCGCCCATACGGTTGCCGTTTCTGTTGGAAAGCGTTTGCTGATGGAGGTACCTTGAGAAAACATGAGAGAATCCATACTGGCGAAAAACCTTACGCCTGTGCAGTTTGCCCTAGAGCTTTCAATCAACGTGTAGTGTTAAGAGAACATATAAGATCCCACCATTCCGGTCCGGATCCTAGGTACACACATAGTATGACGCCTTATTGTTGTTCTGTATGTTCTGACATGTTCGCAACGTCCCAGGATCTGATAGTACATCTAATTCATCATTGTGATATGAACACAGCTATGAAAAGACAGCCACAAGTGGGTCCACGAAAATACAAACGCAGAAGAAAGTTGAAACCTCATGAACTTGATTTACTTTCTCATAGGTTAGAAGATGAACCTGAACTTGAAGAACCGCAACACCACATCCCTATACCGGAATATGAAATTGACATGGAGAAGAAAAGGAAAGTTGtgaggaaaataaaaaaatctccGCCAAAACCGGAAGCAatacattttgaagaaaattatctTGAACAAGAAACTTTTGCCGAGACAGCTTCAATGGAGGAATCTCCTCCTACTCTTTCCATGATGAATTCCAAAATTCAAACTGTTAtgaaatcaaagaaaaaattgaagaacGATAACATAATTCCACCCTCAAGACCGAAGATGATTCACACACAAAAAACCCGAGTACCTGTTGAACCAGGTGAGGATGGCCGAGTGAGACACAGAACCAGAACAACAATCACCAGAACTCAGCCTACGGAATTAAAATCGGCAACAGGAGAAAGAATTCGACCTCGAACAAAAAACGTTAGTTACCACGTCTTCAATTCTGATAAATTACCATTAGCAACTTTTCCTGAAGATGTCACTGCTGTCAATAATTTACTGAAGCAAGACCATGCAACGTTAGAAGAAGAAAATACATCCAATGGTCTATTGTACCTGGACCAAGTTGAGACACCAGAAGTTGCAGCTGAACAGACAATTGAATATGACGAGCCTATTCCTACAAATTTAATTAGGGTCCATAGAAAACCATCTACTAGACAAACGACAAGAAAAGCTAATAGTTTGAAGCCCGGAAGGCACATTATTGGTCCCGGAAGTAAAGTAAGATTAGTTAAGGGTGGCATgttagttaaaaaaaaagtcaaaGAAGAGAAACTCGACGAAGTTGTGGTCAAGCAAGAAGAAAATTATGAGCAGCAAGAGGAACAAGTAATTCAAGAAATTGCTCAAGAAtatattatctccgaaaataaaCAAGACGGGGCGGAAATTGTAGAACAACAAGAAGAAATTTCCAATAATCAAGCATCTCTGGTAAGTGACGTTCAATGTGAACAAGAACTACGACAAAAACAGCAAGTGGAAGAACCAATCTTTGACCCAAGATATGAAATGGTCGATCCCAGTGCTCTGCATGAACTAGCCGAGCTTTCTATGCAGCATGCACAGAATCTTTTCAAGTGCGAGATGTGCAGTGCTGTTTTCTCCGATAGGGCTCAGTTGTTAGTTCACGTACCTATACATATTTGA
Protein Sequence: MEESFSLTWEDSGTVVQNEEVICGIEETEIIPGQTEEFRGTEDIPQNGQEMQGGNIMYLTEDNVLVMQESNENAFPQHFMDCQVTEEVVAEQWEENCPEEIVVGSEEAIGISGEQESAEDVEIPLPTDQDEYTAARPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGVRYIRKCDLMNHLKIHAYIPETENLDEEEMQPLDDSDSDKYRKNRRTFNKKRKKQKIKEEFEHFDTDEMAASSSRNYYTNEELMDVKSFEYLPSDNSQSEELRYPVTDHKKPFVCQHCGVGFAREKALASHARVHGGDSPFECQKCNEMFWDMNAMREHWRTKHGGLEDYDDDEDEDYSEEDHKYGTFYCTTCGLSFHRQDNLKRHQRVHVKDELMNQPEIGHICNVCGESFPEALDLLAHAEIHARSSEHRCMICGEDFEDDQGCAVHVQEKHGNDLPPNTCMLCGRQCKDRRALLKHSWEHSKEKVFSCSKCAKTFHNKARLKRHMLSHRNKVVPCDVCGEEFPDGRTLMNHRHSHSSVSGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPRYTHSMTPYCCSVCSDMFATSQDLIVHLIHHCDMNTAMKRQPQVGPRKYKRRRKLKPHELDLLSHRLEDEPELEEPQHHIPIPEYEIDMEKKRKVVRKIKKSPPKPEAIHFEENYLEQETFAETASMEESPPTLSMMNSKIQTVMKSKKKLKNDNIIPPSRPKMIHTQKTRVPVEPGEDGRVRHRTRTTITRTQPTELKSATGERIRPRTKNVSYHVFNSDKLPLATFPEDVTAVNNLLKQDHATLEEENTSNGLLYLDQVETPEVAAEQTIEYDEPIPTNLIRVHRKPSTRQTTRKANSLKPGRHIIGPGSKVRLVKGGMLVKKKVKEEKLDEVVVKQEENYEQQEEQVIQEIAQEYIISENKQDGAEIVEQQEEISNNQASLVSDVQCEQELRQKQQVEEPIFDPRYEMVDPSALHELAELSMQHAQNLFKCEMCSAVFSDRAQLLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -