Cimp061395.1
Basic Information
- Insect
- Cynegetis impunctata
- Gene Symbol
- -
- Assembly
- GCA_030704885.1
- Location
- JARQZK010004348.1:735062-745949[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.02 33 6.8 2.6 5 33 3 27 2 37 0.80 2 11 0.0033 5.6 9.3 6.8 18 38 43 64 36 66 0.83 3 11 0.011 18 7.6 3.4 10 35 64 89 59 93 0.73 4 11 0.035 59 6.0 3.4 6 33 84 115 82 121 0.72 5 11 0.049 82 5.5 4.3 5 38 115 148 112 149 0.75 6 11 0.00031 0.53 12.5 1.0 5 38 143 176 141 182 0.85 7 11 0.28 4.7e+02 3.1 3.9 6 30 172 196 167 205 0.70 8 11 0.00089 1.5 11.1 5.6 10 38 204 232 198 239 0.83 9 11 0.026 43 6.4 1.5 19 38 240 260 233 261 0.86 10 11 8.1 1.4e+04 -1.6 0.5 18 28 299 309 295 321 0.73 11 11 0.0078 13 8.1 0.5 18 41 327 347 315 349 0.89
Sequence Information
- Coding Sequence
- ATGGTTAATCACGTTCGCAAACACACTGGCGAGACGCCGCATAGATGCGAAATATGTAAGAAATCCTTCACGAGGAAAGAACACTTTATGAATCACGTGATGTGGCACACTGGAGAAACTCCGCATCACTGTAATATCTGCCACAAGAAGTACACCAGAAAGGAACATCTGGCGAATCACTTGCGGTCTCACACGAACGACACCCCATTCAGGTGCGAGATATGCGGAAAATCGTTCACTCGCAAAGAACATTTCACGAATCACATCATGTGGCATACGGGAGAAACTCCTCACCGGTGTGACTTTTGCTCAAAGACGTTCACGAGGAAGGAACACTTGTTGAATCACGTCAGGCAGCATACAGGCGAATCTCCGCATCGATGTGGGTTCTGCTCCAAGTCTTTCACAAGAAAGGAACATCTTATCAACCACGTTAGGCAGCACACTGGCGAAACGCCGTTCAGATGTAACTACTGCCCAAAAGCCTTTACAAGAAAGGACCATCTCGTTAACCATGTTCGACAACATACAGGAGAATCTCCTCATAAGTGTACATTCTGCACTAAATCTTTTACTCGAAAAGAACATCTCAATAATCACGTTAGACAACATACTGGAGAATCCCCTCACCGATGTGAATTTTGCCAGAAGACTTTCACCCGCAAAGAGCACCTAACTAATCACTTACGCCAACACACTGGAGAAACTCCCCATTGCTGCAATGTTTGCTCTAAACCTTTCACCCGCAAAGAACATCTAATTAATCATATGAGGTCTCATACGGGGGAAAGGCCGTTTGCTTGCGCGGAGTGTGGGAAATCTTTTCCTTTGAAGGGAAATCTCCTATTCCACCAGAGATCGCACAATAAGGGTGCTGCTGCCGATAGGCCGTTCAGGTGTGATTTGTGCGACAAAGACTTTATGTGTAAAGGTCATTTGGTGTCTCACAGGAGGTCCCATAGTGGCGAACGGCCACATGTATGTCCTGATTGTGGAAAGACGTTTGTTGAGAAAGGTAATATGATGCGGCATCTACGCAAACACGCCACAGACAACGTTCAATTAAACCCACCGCAGCCGCTTAATGCCGCCCAGAACGCGCAGTCGGCCAACCTCCAAATTCCACAAGTCAGTCAGCCGACTAGCCCCGCGTCCGGAGGGACGATCGTTTCGCAACAGCAGCAAGGCAACATCCCCCCACAGCATTTATCTATGCACGCACCGCCAACTCAGAGCGGTCATCCTGTTGTAGTGCCTGCGCCCAACGGTAACGTACTGGCATCTTACTAG
- Protein Sequence
- MVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCNICHKKYTRKEHLANHLRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLINHVRQHTGETPFRCNYCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLNNHVRQHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFACAECGKSFPLKGNLLFHQRSHNKGAAADRPFRCDLCDKDFMCKGHLVSHRRSHSGERPHVCPDCGKTFVEKGNMMRHLRKHATDNVQLNPPQPLNAAQNAQSANLQIPQVSQPTSPASGGTIVSQQQQGNIPPQHLSMHAPPTQSGHPVVVPAPNGNVLASY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00416973;
- 90% Identity
- iTF_00416973;
- 80% Identity
- iTF_00416973;