Cimp066690.1
Basic Information
- Insect
- Cynegetis impunctata
- Gene Symbol
- Smarcc2
- Assembly
- GCA_030704885.1
- Location
- JARQZK010004450.1:74449-78372[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.12 5.4e+02 3.0 0.0 6 21 29 44 28 54 0.89 2 2 5e-16 2.2e-12 49.1 0.1 3 44 459 500 457 502 0.95
Sequence Information
- Coding Sequence
- ATGATCAAAGAATGCATAATTGCAGTAGTCGAAGAAATGTGCCCTGAAAagGTGTTGATTTATATTCGAGGAGTAGATAAAAGCTATGAAGAGCATGAAGAACTTCTTGATATGTATAGTATTCATGGCAAAACTACTGGTACAGATATTTTTAAAGGAGTTGAAATGGCCATTAATCAAAAGAACCTTCGATGGAAAAACTTGAAATGTATTACAACTGATGGAGGCAAAAACATGAGAGGGAAAGATAAAGGAGTGATCGCTCTTCTGTCAAAGGCTGTAGAAAATGACGGTGGTTCAAAACCATTAGTCTTACATTGTATCATTCATCAACAGTCTTTGTGCGGAAAATGTTTGGATATGTCTGAAGTTCTGAAACCAGTCATATCAACTGTTAATTTTATCAGATCTTTTGGGCTGAATCACCGACAATTCCGACAATTTATTGAAGAGATTGGAGAAAATGACTCACCTTATCATACTGCTTCCAAGGTATTGCTAAAACATGTAAAGAGAAAGAACCTTAAATTCTCTACTAAttcaaaaaaatccaaaatatctacagaaaaaaaGGATTTCACTGATTTAAATTCTAAACCACAAAGCCCCCATATTGAAAATGATAAGTCTTCTGAAAAACCattagaaaaattaattgaaaaaagattaTCATTGGCATCACCTTCAGATAGAGTCTCAGTTGAAgagaaaatttcagatgaaaaaataatttctttagaAAATGAGAAATCTCCAGAAGTTGAAGAAGAAAAACAAGATTTTTCCGATCAATTAGAACAGCGACCCTTctttgatgatgatgataagCTCATTGAACAAACAAATCACATTATAATTCCTTCTTATTCAACATGGTTTGATTATGATTCTGTTAGTGAGTTGGAGAAAAGAAGCTTGCCAGAATTTTTCAATGGCTGTAATAAATCTAAAACTCCTGAAGTTTATGTTGCATATAGGAATTTTATGGTGGATACTTATCGGTTAAATCCTACCGAATATCTTACTAGTACTGCCTGTAGAAGAACTCTTGCAGGtgatgtatgtgcaattatgcGGATACATGCATTTTTAGAGCAATGGGGTCTTATCAACTATCAGCTGGAATGTAATAGTAAACCCTCTGAAATGGCACCTCCACCTACCTCACATTTTCAGGTTCTAACAGACTCTCCATTAGGTATACAAAATGTTCCCCAATTTAAAATGCTTCAGAACGATCAAGGGAAACAAATATTAGATTTAGATTGTcatgttgaagaaaaaattgtacATTTTGGGCAGTTTGGATTAAAGCTTGATCAATATTCAGATAAAATAAGAAAACGTACTAAGGCAGTACATGATGCCATGAGATGTTGGACTGAACAGGAGACATTGTTACTTTTAGAAGCTGTAGAGATGTTCAAGGATGATTGGAATAAAGTTGCTGAACATGTTGGTTCAAGAACACAGGATGAATGTATATTACATTTTCTACGACTTCCAATAGAAGACCAGTTTTTAGATAAACTACCAGCAGGTCTGTTTAGTTTTCAACCAATACCATTTAGTAAGCAAGGAAATCCAGTTGTTTCTATAATTGCATTCTTAGCTTCAATTGTGGATTCTAAAGTTGTAACTGTTGCAACAGAAAGTGCACTgagtttatataataaaatgaaggaagaaGAAGTACCTCATCATATTATAGATGAACATATAAGAAGAATTAGAGAATCAAAAATTGAAGGGACATTTGATCCAACCTTTCGATTGGAAGAAACTGGTATTTATGGAACAGATAAATGTGATAAGGACTTTGATCATAATACTTTAGAAAAGGTGAAGATTCCTAAACATAATGACATGATACTAGACACTAATGTTCAAAAAGAAATTGAAGATACAGCCATTCATGCTTTAGTTACTGCAGCAGTTAAGGCTAAAAAGTTGGCTGAAGGTGAAGAGCAAAAAATGAGATGTTTAATACAGCTTCTTATTGaaacacaaatgaaaaaatttgaaattaagttGCAACAATTCAGAGGGCTTGAACTGATGCTTGttaaagaaaaagaaatattagaGTACCAGAAACAGCAGTTAATTAATGAACGACAGAGCTTTCATCTGGAGCAACTTGAAGTTGCTGAACAGAGAGCAAAACACCAGGCTCAACTGAAGCTTCATCAATccgaataa
- Protein Sequence
- MIKECIIAVVEEMCPEKVLIYIRGVDKSYEEHEELLDMYSIHGKTTGTDIFKGVEMAINQKNLRWKNLKCITTDGGKNMRGKDKGVIALLSKAVENDGGSKPLVLHCIIHQQSLCGKCLDMSEVLKPVISTVNFIRSFGLNHRQFRQFIEEIGENDSPYHTASKVLLKHVKRKNLKFSTNSKKSKISTEKKDFTDLNSKPQSPHIENDKSSEKPLEKLIEKRLSLASPSDRVSVEEKISDEKIISLENEKSPEVEEEKQDFSDQLEQRPFFDDDDKLIEQTNHIIIPSYSTWFDYDSVSELEKRSLPEFFNGCNKSKTPEVYVAYRNFMVDTYRLNPTEYLTSTACRRTLAGDVCAIMRIHAFLEQWGLINYQLECNSKPSEMAPPPTSHFQVLTDSPLGIQNVPQFKMLQNDQGKQILDLDCHVEEKIVHFGQFGLKLDQYSDKIRKRTKAVHDAMRCWTEQETLLLLEAVEMFKDDWNKVAEHVGSRTQDECILHFLRLPIEDQFLDKLPAGLFSFQPIPFSKQGNPVVSIIAFLASIVDSKVVTVATESALSLYNKMKEEEVPHHIIDEHIRRIRESKIEGTFDPTFRLEETGIYGTDKCDKDFDHNTLEKVKIPKHNDMILDTNVQKEIEDTAIHALVTAAVKAKKLAEGEEQKMRCLIQLLIETQMKKFEIKLQQFRGLELMLVKEKEILEYQKQQLINERQSFHLEQLEVAEQRAKHQAQLKLHQSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -