Cimp027312.1
Basic Information
- Insect
- Cynegetis impunctata
- Gene Symbol
- -
- Assembly
- GCA_030704885.1
- Location
- JARQZK010001606.1:70651-71058[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-07 4.9e-05 25.1 0.0 8 40 4 36 1 40 0.85
Sequence Information
- Coding Sequence
- ATGATTTCAGCAACTTTAGCTGTTCGACAAGGAGAAATGGGCTACATGAGAAGTGCGCAGACCCACGGTGTACCTCAAACGACCTTAGAAAGGTACGTAAAAATGGGAGGAATGCCTGAAGACATTGTGAATTCTTCGTTAGGACGAAAGATAGTCTTCCCACAAGAAATGGAGTCAATGCTCGCAAATCACTGCTTAGAaatggaaagaaatttttttggaattattCAAAAAGACGTGTGCAGATTGGCATACAGCTTATGCAAggctaataatataaaaaatccaTTTAGCGTAGCAAAAGAAAGTGCTGGAAAGAAATCCCCTGAAAGACAAGTTACCCCTCCAAGACAGCAAACCGCTGAGAGACACGTTACCCCTGAGAAACAGATTACCCCTGCAAACTAG
- Protein Sequence
- MISATLAVRQGEMGYMRSAQTHGVPQTTLERYVKMGGMPEDIVNSSLGRKIVFPQEMESMLANHCLEMERNFFGIIQKDVCRLAYSLCKANNIKNPFSVAKESAGKKSPERQVTPPRQQTAERHVTPEKQITPAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00416071; iTF_00416211;
- 90% Identity
- iTF_00416211; iTF_00416071;
- 80% Identity
- -