Cimp026539.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cynegetis impunctata
Gene Symbol
HSP70A1
Assembly
GCA_030704885.1
Location
JARQZK010001569.1:124757-128939[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-08 4.4e-06 28.5 0.0 2 39 20 56 19 58 0.96

Sequence Information

Coding Sequence
ATGCCAAGAGCGAAAAGGCCAAAACGTCCTGGATCCCGCAAATATAAGGATTACAATGACGAGAGCATGCAGAGGGCCGTAGCGGAATGTCAAGAAGGCGCTAGTTTCAAAAGGGTGGCTGAACGATATGGAATTAATAGAACTACATTAATGAATCATGTGAAGGGATGGAAGTGTAAAAAAGTTGGTCGGCCAACAGTTTTAACACAAGAAGAGGAAGAGATGCTCGTACAGTCACTTGTTAAATTGGGCGAATGGGGTTATGAGTTAGACAGACTCCAAATTCAAAGATGCGTTCAAGACTACCTACGTAGGTTGGATCGACCGAACCCATTTAAAGATGGCTTGCCCGGTTTAGACTGGTGTCTTGTGTTCGAGAATCGTTGGAAGGCAATTATTAGCCGTCGCGTTGCACAGAATTTACCAAGAAATCGTGCTGTCGCCGGTACCAAGGAAGTTATGGAAGACATGTTCGAAAAACTCAAGAATGTTATTGAGCGACTTGGCTTACAGAACAAgcctcaaaatatatataactgtgACGAAATTGGCTTCCAAACAGATGCTGGCATTCAAAAAGTTATGTGTAGAAAGGGCTCCCGTTATCCGAATAAGCTAGTGGGAAGCGTTACCAAAGCGACCTACACTGTGCTTATGTGCTGCAATGCAATAGGTGATTTTTCACCTATGTTTATAAACTATAAAGGTATTCATCTCTATTCAACATGGTGCGTCAACGGACCTGACAGGGCTCTTTACAATTGTTCGCCATCAGGTTGGATGGAGGCTGCACAATTTCTCGACTGGTTTGAAAAGTGTTTTGTGAAAGAAACTTCAAAAATTGAAGGTAACAAGCTATTAATCCTTGATGGCCATAATTCACATATTTCATTGGAACTGATAGAAATGGCAATGCAGAACAATATTGAGATATTCTGTTTACCGGCGAATACTTCACATTTACTACAGCCGCTCGATGTGGGGGTGTACAAGTCTGTCCAAAATGCATGGCGACTAATTCTACGTGACTACTATCAGGAATCTGGTTACAAGAACGTTGACAAACTGGTATTCCCTTCCCTAATGAAGAAGTTATCTAAATCAGAGTGTCTCTCTAGAGCCAATGCGGTGGGCGGTTTTGAAGGAAGCGGAATATTTCCTTTGTGTAAAGATAAAATAATGCGAAAAGTTGAAATTGCGGAAATTATCAATGAACAGGGGCAAACTGTTGACCCTCCAATACCGCTGGAATCAAATAACGTTTCAGAGCTGCATGCAACAAACTTACCTTCAACATCAAAAGAGAATCTACCagataaaaataacaataacaacGCTGTCAATGGCTCAACTTCAACAATACCTTTCCCATTGAATTCGCCGTCTTCTAGTGCACACAATATGACACAATCGCTTATGTCTGTGCTGAAAGTACAAAACCAAAAGGAGTCCCAAGCAGGAAAGCGTAATCGAATTAGTAGAAAATTTGCGGAAAGCCTAACAAGCTTAGAAGTAGTAGAAAGACTACGTTGTAATAAAACTAAAAAGCAAGCGAAGAAAACTGTGAAGAAAGGAAAAAGAAAAGTAGCTGAGCTTCTCAGCTCGAGCTCGGATAGCGAAGTATCCGTAATTATCGAAAGTGAAAAAGAAATGGAAGATGTACATGAAGATGTACATGAAGATCACGCCTCAACTGAAATCGACCAAAGCATGGAAGTGGTACAGGTTGAGCCAAAATATGTTGACATCAATGCTGTAGAAAAGGGTTCCTGGATAATTTCAAACAGCCCAGCAAGAACCATTGACGAAGGATCCTTGTTTGAAGTTCGAGCTACAGCAGGAGATACTCACCTTGGGGGAGAAGACTTTGACAACAGGTTAGTCAACCATTTGGCAGATGAATTTAAACGTAAATTTAGGAAAGACCTTAAAAGTAATCCAGGAAGTCTACGACGACTCAGAACTGCTGCTGAAAGAGCTAAACGTACTCTGTCATCCAGTACAGAAGCCATAATAGAAATTGACGCTCTGTTTGAAGATATCGATTTATATACTAAAGTATCAAGAGCAAGATTTGAAGAACTGTGTTCTGACCTATTCAGAGGTACACTTCATCCAGTTGAGAAAGCGTTAACAGATGCAAAAATGGATAAAGGCTCAATACACGACATAGTATTAGTAGGAGGATCAACTAGAATTCCCAAAATTCAGCAGTTACTTCAAAATTACTTCAGTGGTAAATCACTGAATTTGTCTATAAATCCTGATGAAGCAGTGGCATATGGAGCTGCAGTTCAAGCAGCAGTTTTAAGCGGAGAACAAGATTCTAGGATCCAAGATGTTCTTTTAGTTGATGTAACACCGTTGTCTATGGGTATTGAAACAGCAGGAGGTGTAATGACTAAAATCATTGAAAGAAATGCAAGAATACCTTGCAAACAAAGTCAGACTTTTACCACATATGCGGATAATCAACCTGCGGTTACCATTCAAGTGTTTGAAGGTGAGCGGACCATGACTAAAGATAACAACTTATTAGGAACTTTCGATTTGACTGCTATCCCACCGGCACCTCGAGGAGTTCCAAAGATTGAAGTCACCTTTGATCTGGATGCCAACGGAATTTTAAATGTATCGGCAAAAGACACCAGCTCTGGTAATTCTAAGAATATTACAATCAAGAATGATAAAGGACGACTTTCTCAAAAAGATATTGACAAAATGGTATCTGAtgctgaaaaatataaagaagaagaCGAAAAGCAGAGACAAAAGATTGCAGCCAGAAATCAACTAGAAGCTTACGTTTTCCAACTGAAACAAGCAGTATCTGATTGTGGGGATAAACTAAACGTAGAAGACAAAAACACTATTGAAAGAGAATGCCAGAGTTGTTTGCAGTGGTTAGACTCGAATAGTCTTGCAGAAAAAGAGGAATATGAAGACAAACAGAAACAACTTACATCTATATGCAGCCCTATAATGTCAAAATTATATGGAGGCGGTGCATCTCATGGCAGTCAGTTCAATGGAGCCCCAGGTGGAATGCCAAGTAGTTGTGGCCAACAAGCAGGAGGTTTTGGAGGAGGACAAGGACCCACAATTGAAGAAGTGGATTAA
Protein Sequence
MPRAKRPKRPGSRKYKDYNDESMQRAVAECQEGASFKRVAERYGINRTTLMNHVKGWKCKKVGRPTVLTQEEEEMLVQSLVKLGEWGYELDRLQIQRCVQDYLRRLDRPNPFKDGLPGLDWCLVFENRWKAIISRRVAQNLPRNRAVAGTKEVMEDMFEKLKNVIERLGLQNKPQNIYNCDEIGFQTDAGIQKVMCRKGSRYPNKLVGSVTKATYTVLMCCNAIGDFSPMFINYKGIHLYSTWCVNGPDRALYNCSPSGWMEAAQFLDWFEKCFVKETSKIEGNKLLILDGHNSHISLELIEMAMQNNIEIFCLPANTSHLLQPLDVGVYKSVQNAWRLILRDYYQESGYKNVDKLVFPSLMKKLSKSECLSRANAVGGFEGSGIFPLCKDKIMRKVEIAEIINEQGQTVDPPIPLESNNVSELHATNLPSTSKENLPDKNNNNNAVNGSTSTIPFPLNSPSSSAHNMTQSLMSVLKVQNQKESQAGKRNRISRKFAESLTSLEVVERLRCNKTKKQAKKTVKKGKRKVAELLSSSSDSEVSVIIESEKEMEDVHEDVHEDHASTEIDQSMEVVQVEPKYVDINAVEKGSWIISNSPARTIDEGSLFEVRATAGDTHLGGEDFDNRLVNHLADEFKRKFRKDLKSNPGSLRRLRTAAERAKRTLSSSTEAIIEIDALFEDIDLYTKVSRARFEELCSDLFRGTLHPVEKALTDAKMDKGSIHDIVLVGGSTRIPKIQQLLQNYFSGKSLNLSINPDEAVAYGAAVQAAVLSGEQDSRIQDVLLVDVTPLSMGIETAGGVMTKIIERNARIPCKQSQTFTTYADNQPAVTIQVFEGERTMTKDNNLLGTFDLTAIPPAPRGVPKIEVTFDLDANGILNVSAKDTSSGNSKNITIKNDKGRLSQKDIDKMVSDAEKYKEEDEKQRQKIAARNQLEAYVFQLKQAVSDCGDKLNVEDKNTIERECQSCLQWLDSNSLAEKEEYEDKQKQLTSICSPIMSKLYGGGASHGSQFNGAPGGMPSSCGQQAGGFGGGQGPTIEEVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-