Basic Information

Insect: Cynegetis impunctata
Gene Symbol: -
Assembly: GCA_030704885.1
Location: JARQZK010000885.1:29427-46574[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.2e-09 3.8e-07 31.9 0.0 4 38 13 47 10 51 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.2e-09	3.8e-07	31.9	0.0	4	38	13	47	10	51	0.94

Sequence Information

Coding Sequence: ATGGCGAAGAGAAAATACAATACTTGGAAGCAGAAAGATATGGAAGAAGCTTTACAGAAGCATCGGAATGGAGAAATTGGATTAAATGAAGCTTCTAGAAGATTTAATATACCAAAGCCTACACTGCGACGACATTTGAAGGATATGGAAGAGATATTAGCGCAGCATTTGATAAATTTAGAGTCCTGTTTCTTCGGATTAACTGTCACTGAGTTCAGGAAACTTGCCTTCGAGCTTGCTGAAAAATTTCAACTACCGCATCGTTTTAACAAGGAGAAGAAAATAGCAAAAAATGAACCAACCTCGATGGCCAGAAGTCAGGGATTTAATAAAGAGCGTGTTAATGAGTTTTTTGATGAGTACGAAGAAATATTGGATAAATACAAATTTGCTACGCATCAAATATATAATAAGGATGAAACTGCATTGTCCACCGTTCATAAACATTCCAAAGTTATTGCTCAAAAGGGGAAACACCAAGTGGGTGCAATCACAAGTAGAGAAAGAGGTTTGACTACAACCGGCATATGTGAGATGAATGCAGCAGCTTCTGTATATATTTCTGATTCATCGAATCAAGAATTTGGTGATTCAACTGAACAAACTACGGAATCACCTCCTGGTGCTACATCGGAATCAGTATTAACGCCACCAGTAGTTGCATCGTTACCAATAAGTGCTGTATCTCCACAAACCATATCATCACCACCAAAAATCACAACGTCACCCTTAACACGCATAGATTTAACATCGCCCATCATTCAACCTGGACCTTGCACAATATTACAAGATACTTCATACGATGACAATATTTCAACAGTTGATGAACAATTGAAGTTTCAATTTACTATTTTATCTCCTGTGCCTTGCATAAAaacagttattaaaaaaattgagaaaggAACTAAGCCGACAATGGAATTAACTTCAAGTCCCtacaaaaatgaaatagaagcCAAGGATAACACAAACAAAAGGAAGAAGCCTGTACTAGATCTGAACGAAGTCAAAACAGAaaaaggaatgaataaaactttaaaaagaagaaacacaGGGAAAGAAAGCAAGAACAAGAAAATGAAAGCTGAAGAATCGTGGTTGTACCAACTTTGTCAGGAAGATCGTAAAGAAAGCATGATTCAGTGTATGAAATGTAAAGGTTGGGTACATGACTTATGTGCTGGGGTTGAAAGCCATAGAAAGAAATATGTTTGTGATATTTGTGTTCAATctGTTGGTCCGATTCTTCCACAGTTGCAAGTATTCGGGAAACAATTAGGCATCTCTTCCGTTATTATGGGCACTGTCACTGGAATTTTGCCTTTTGTATACTTATTGGCGAAACCTTTATTTGGCATATTAGTGGATATGTACAGAGACTACAGAAAAGCCATATTTATGGGCCTTATAGTGATAATGGCGCTTTCGTATGGTTCAATTATTTTCGTTCCAGTGAAGTCAGGGGAGTCATTCGACATTGTAGTTGAGGAACCAATTGATGGGTGTGATAATGCAGCGttgaataaaattaatgttACAATTGCAGAATGTTCTCCGGAATGCATTATAGAATCTGTCGATATTGAACAGTACCTCATACGCAACAAAGGAGAAAATATATCGTTGGCatgtaacaaaaacaaaaattccagACTGTTCAAATTACCTTGTACTTTCAAATGcaaagaatattttgaattaccCAGTAATATGTTATTGCTGTCAGCGCCATTCTGGTGTTTTGTTGGATTATTGTCTATTGGTACTATTGCTTTCAATGTAGTTAATTCCATAAGTGATGCCATTTGCTTCGACGTGATTGggGATGAATATGACTACGGTAAACAGAGAACTTGGGGAGCGATTGGATATGGAGCCACAGCTCTTCTTTCAGGTTACGCTATGGATCATCTGTCCATCTTCATGGTGGGATATATACCTGCTGTTGGTATTATGATAACATTCACTATATTAGATCTGTTATCTTGCTTAAAACTGAAATTGCCTATAATTCCTGCACCAGAAAATATTTGGAAAGATTTGAAGAATTTACTGAAATATAAAACTGTTAGCGTTTTCCTCATATTTACGATAATTGCTGGTACTGTGGAAGGATTcctttcatattttcttttatgGTACGTTGAAGATATAACGAAATTTTCCAACATCGATAATATTAAAATACTCGAAGGATACATCATAGCTGCTGGAACGTTCGgtggaaatatattatttttctacgtAGGAGATTATATATTGAAGAAACTAGGACACATCAATTGCTTCAGCGCTTGCTTCTTATGTTACGCCGTACGTTTAGGACTTATTTCTATTGTTTCCTCCCCATGGAGTATTGTAATTATCGAATTTTTCCTCCAAGGTCCTTCATACGCACTGACTTATTTGACCATTGTAGCTTATGCCAACGAAATATCACCTCCAGGAACGTCAGCAACTATGCAAGGTATAGCTGCTGGACTTGATGATGGATtagGATTTGCTTTTGGAAGCATAATAGGTGGAATACTTTATCGATTCGCTGGGCCAAGACGAACTTTCCAAATGTTTTCATGTTTCAGTATTGCTTCAGGGATGGCgcatcatatttttcataaatattaccTACAGAAGACTGAGATAACAGACAGTTCTAGAAAAGCTGTATACACTAATGTACctcaaaaataa
Protein Sequence: MAKRKYNTWKQKDMEEALQKHRNGEIGLNEASRRFNIPKPTLRRHLKDMEEILAQHLINLESCFFGLTVTEFRKLAFELAEKFQLPHRFNKEKKIAKNEPTSMARSQGFNKERVNEFFDEYEEILDKYKFATHQIYNKDETALSTVHKHSKVIAQKGKHQVGAITSRERGLTTTGICEMNAAASVYISDSSNQEFGDSTEQTTESPPGATSESVLTPPVVASLPISAVSPQTISSPPKITTSPLTRIDLTSPIIQPGPCTILQDTSYDDNISTVDEQLKFQFTILSPVPCIKTVIKKIEKGTKPTMELTSSPYKNEIEAKDNTNKRKKPVLDLNEVKTEKGMNKTLKRRNTGKESKNKKMKAEESWLYQLCQEDRKESMIQCMKCKGWVHDLCAGVESHRKKYVCDICVQSVGPILPQLQVFGKQLGISSVIMGTVTGILPFVYLLAKPLFGILVDMYRDYRKAIFMGLIVIMALSYGSIIFVPVKSGESFDIVVEEPIDGCDNAALNKINVTIAECSPECIIESVDIEQYLIRNKGENISLACNKNKNSRLFKLPCTFKCKEYFELPSNMLLLSAPFWCFVGLLSIGTIAFNVVNSISDAICFDVIGDEYDYGKQRTWGAIGYGATALLSGYAMDHLSIFMVGYIPAVGIMITFTILDLLSCLKLKLPIIPAPENIWKDLKNLLKYKTVSVFLIFTIIAGTVEGFLSYFLLWYVEDITKFSNIDNIKILEGYIIAAGTFGGNILFFYVGDYILKKLGHINCFSACFLCYAVRLGLISIVSSPWSIVIIEFFLQGPSYALTYLTIVAYANEISPPGTSATMQGIAAGLDDGLGFAFGSIIGGILYRFAGPRRTFQMFSCFSIASGMAHHIFHKYYLQKTEITDSSRKAVYTNVPQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -