Cang004952.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cynaeus angustus
Gene Symbol
nfxl1
Assembly
GCA_030157275.1
Location
CM058059.1:26997867-27001756[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 2.2e+04 -5.0 1.9 15 19 161 165 161 165 0.85
2 20 0.13 1.5e+03 -0.3 0.4 4 10 196 202 195 202 0.95
3 20 3e-08 0.00034 20.9 17.0 1 19 210 227 210 227 0.99
4 20 5.1e-06 0.057 13.8 14.1 1 19 263 281 257 281 0.87
5 20 0.98 1.1e+04 -3.1 0.7 5 10 305 310 305 310 0.92
6 20 4.4e-09 5e-05 23.5 12.7 1 19 316 334 316 334 0.99
7 20 1.8e-06 0.02 15.2 10.0 1 18 369 386 369 387 0.97
8 20 1 1.2e+04 -3.2 0.2 1 4 396 399 396 400 0.87
9 20 1.4 1.6e+04 -3.7 1.2 6 10 411 415 410 415 0.87
10 20 7.8e-05 0.87 10.0 17.5 1 18 421 438 421 439 0.94
11 20 2.4e-10 2.7e-06 27.6 10.1 1 18 448 465 448 466 0.97
12 20 0.59 6.7e+03 -2.4 1.0 5 10 494 499 494 499 0.94
13 20 0.00033 3.7 8.0 7.6 9 19 514 524 512 524 0.91
14 20 0.043 4.8e+02 1.2 4.7 4 12 536 544 534 544 0.88
15 20 0.65 7.2e+03 -2.5 5.8 14 19 572 577 572 577 0.90
16 20 2 2.2e+04 -4.4 1.4 6 10 603 607 602 607 0.58
17 20 6.3e-05 0.7 10.3 4.0 1 12 613 624 613 627 0.95
18 20 2e-06 0.022 15.1 18.4 3 19 654 670 653 670 0.94
19 20 2.2e-06 0.024 15.0 10.9 1 16 713 727 713 733 0.93
20 20 1 1.1e+04 -3.2 1.1 6 10 763 767 762 767 0.89

Sequence Information

Coding Sequence
ATGGCCAGCAAGAAAAAGGAATCAAATGTTTGGAATAAAAAACGTAACCAAAACAAGACCAAGGTTCCAAGTGCCCACTTGCCCACACCCGCTGagcttaaatttaaagaagcaCACGGAAAACTGCAAGCTGCGGTGCGAAAACATGTCCAAGATTATGAATCTTCTTCCTCTGAGGAAGACTTAGAGTCAGAGAATATCATAGatgtggTGATAAAGAACTATACTCAAACTGGGggtaaaaatgagaatttaggACGAACGAAGACTTTTCTTCAGGATTCTTTCCTGTCAGGAACTGCCACGTGTCTCATTTGTATATCTAGGATCAAAAGGGACGCACAGATATGGAATTGTTATGAATGTTACTGTGTCTTTCACCTCAACTGCATCCAAAGATGGTCTAAAGACAGCATTTATCAACAAAAACAGATCCAAGAAAGCCCCATTCAAGTTTCTAAAGTTACTTTAAGTTGGGGCTGCCCTAAATGTAGGCATGATTATCAAATTGGTGATGTTCCCGAGAAGTATCTTTGTTTCTGTGGTAAAACAACAAACCCTAAACCTCAGCCATTTCTGGTGCCCCATTCTTGTGGGGAGATTTGTGGTAAAGATTTGATTCCTCTTTGTGGGCACAAGTGTCTGTTATTGTGTCATCCTGGACCTTGCCCACCATGTCCTGTCACAATTAACATTAGTTGTTACTGTGGAACACAGCAACCCACTACAAGAAGATGTAGTGATAAAGAGTGGTCTTGTGGAAATCGATGTGGGAAGCTTTTGGGATGTCAGAAACATAGTTGTTCAGATCCTTGTCATGCAGGAGATTGTAAAGCTTGTCCCAAgaaaagtttgcaaaaatgtATGTGTAAATCTAGCAGCAAGTTAAGGGACTGTGCATCTCCAATTTGGAAATGTGATAagATATGCAATAAACCACTTTCTTGTGGCAATCATAGTTGCTCAATAGTTTGCCATGATGGGAACTGTGGTTCTTGTCCTTTGACGCAAGAACGGTCGTGTCCTTGTGGCAAAAGCAAATACTTGTTGCCTTGTACTGAAGAAACACCAACTTGTCTTGATACTTgtgaaaaacttttggattGTGGTCTTCACACTTGCAATCAGCGTTGTCACAAAGAAGCTTGTGGCATGtgccttgaaattgttgaaaagcTTTGTAAATGCGGTCTTCATTCCAAAGAAGTACAGTGCTACAAACCCTACTCTTGTGAAAGCAAATGTAAACGGATGAAGGACTGTAATAAACATCCATGCAACAAAAAGTGTTGTGATGGTAATTGTCCCCCGTGCGAAAAACCTTGCGGCCGAACTCTAAACTGTGGGAACCACAAATGCGCCTCAGTCTGCCACAGAGGCTTATGTTATCCTTGCAACCAAACTGAGAGGGTTAGTTGTCGTTGTGGTGAAACGAAAATCAGCGTGCCTTGTGgaagaaaacataaaactaGACCACCCAAATGCAACAAATTATGTTctttaccACCAGATTGCCACCACGAAAGACGGGAACCGCATAAATGTCATTTCGGGGATTGTCCACCTTGTAGACAAACATGCAACCAAAGTCGACCAAAGTGTGTTCATCTATGCAGCGCACCATGTCATTCTGCTGTGATGGTAAAAATAGAGGCCCAGAAACCGTCAATGCCGTGGGAGCAAACCGAGCCTCAGATGGAACGTAGAGCTTTGCCTTGTCCGCCGTGCAAAGTACCAATGGCAGTGACATGTTTAGGTGGACATGAAACGAGCGACTGGCCTTGTCACATGGCGATGCCTTCCAGTTGCCACAGACCATGCGGACGCGTTCTCCTCTGTGGAAACCATATTTGCACCTTTCCCTGTCACACAGTTGAAGGCAGCCCTGACTCGGTCAAGGCCGGGACGAACTGCGAAGCCTGTGAAAGTTCTTGCACCAAAGAACGTCCAGAAGGTTGTAACCATGAATGTCCCAGACCATGTCATCCAGGATCGTGCCCTCCGTGCAAACAAATGCTACGAATAAGATGTCATTGCGGCCTAAATCAGCCTTACGTCGCGTGTGTAGAGTGGTTAGTTTTAGAAAAGAGAGAAGAAATCCAAAGTTGCGGTAATCAATgccctaaaaattttgactgtGGGCACAGATGTCGCGCAAATTGTCATTCCGGACCGTGTCCTAACGCTGAACTGTGCAAGAGAAAGGTAAAAGTACCGTGTAAATGCAAGAGATTGAAGAAGGAGTTTTCCTGTGAGTCCGTACGGAATAAATCGGCGGTAGTCCAGTGTGATGAGGTTTGtatgaaaaagaaagaagaggAGATGAAGATGCAGGAAAGTGTGAATGAGCAGAAGCGGAAAGAAGAGGAGTTGAAGAACGAGAAGGAGTTGGCAAAGTATAAGAAGCTAtttgaaaacaagaaaaaaagtagAGATAGGAGATTGTTAGAGGAAATTGAAGAGgtttctttcttttcaaaacaCTGGTTTGTTATTGTTTCATCTGTGACTCTAACTGTCTCCgttacacttttttatttatttggtgGCTTTTCTTAG
Protein Sequence
MASKKKESNVWNKKRNQNKTKVPSAHLPTPAELKFKEAHGKLQAAVRKHVQDYESSSSEEDLESENIIDVVIKNYTQTGGKNENLGRTKTFLQDSFLSGTATCLICISRIKRDAQIWNCYECYCVFHLNCIQRWSKDSIYQQKQIQESPIQVSKVTLSWGCPKCRHDYQIGDVPEKYLCFCGKTTNPKPQPFLVPHSCGEICGKDLIPLCGHKCLLLCHPGPCPPCPVTINISCYCGTQQPTTRRCSDKEWSCGNRCGKLLGCQKHSCSDPCHAGDCKACPKKSLQKCMCKSSSKLRDCASPIWKCDKICNKPLSCGNHSCSIVCHDGNCGSCPLTQERSCPCGKSKYLLPCTEETPTCLDTCEKLLDCGLHTCNQRCHKEACGMCLEIVEKLCKCGLHSKEVQCYKPYSCESKCKRMKDCNKHPCNKKCCDGNCPPCEKPCGRTLNCGNHKCASVCHRGLCYPCNQTERVSCRCGETKISVPCGRKHKTRPPKCNKLCSLPPDCHHERREPHKCHFGDCPPCRQTCNQSRPKCVHLCSAPCHSAVMVKIEAQKPSMPWEQTEPQMERRALPCPPCKVPMAVTCLGGHETSDWPCHMAMPSSCHRPCGRVLLCGNHICTFPCHTVEGSPDSVKAGTNCEACESSCTKERPEGCNHECPRPCHPGSCPPCKQMLRIRCHCGLNQPYVACVEWLVLEKREEIQSCGNQCPKNFDCGHRCRANCHSGPCPNAELCKRKVKVPCKCKRLKKEFSCESVRNKSAVVQCDEVCMKKKEEEMKMQESVNEQKRKEEELKNEKELAKYKKLFENKKKSRDRRLLEEIEEVSFFSKHWFVIVSSVTLTVSVTLFYLFGGFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00753484;
90% Identity
-
80% Identity
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