Basic Information

Insect: Cynaeus angustus
Gene Symbol: RREB1
Assembly: GCA_030157275.1
Location: CM058058.1:23068688-23079246[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0002 0.016 15.9 0.6 1 23 72 94 72 94 0.98

2 16 0.0004 0.032 15.0 0.5 1 23 106 128 106 128 0.98

3 16 0.00018 0.015 16.0 6.2 1 23 134 156 134 156 0.98

4 16 0.81 66 4.6 0.1 1 9 212 220 212 236 0.68

5 16 0.024 2 9.4 1.2 2 23 242 264 242 264 0.97

6 16 0.71 58 4.7 0.9 1 20 309 328 309 330 0.86

7 16 0.064 5.2 8.0 0.1 1 23 452 474 452 474 0.96

8 16 7.2e-06 0.00059 20.5 0.8 1 23 483 505 483 505 0.99

9 16 0.00073 0.06 14.1 3.1 1 23 511 534 511 534 0.97

10 16 0.00044 0.036 14.9 3.0 1 23 867 890 867 890 0.97

11 16 0.00049 0.04 14.7 0.5 2 23 1095 1116 1094 1116 0.97

12 16 0.11 9 7.3 6.3 1 23 1122 1145 1122 1145 0.97

13 16 0.011 0.9 10.4 1.2 1 20 1173 1193 1173 1194 0.95

14 16 0.12 9.9 7.2 0.7 1 23 1251 1274 1251 1274 0.93

15 16 0.015 1.2 10.0 0.4 3 23 1321 1341 1319 1341 0.93

16 16 0.0066 0.54 11.1 5.9 1 23 1347 1369 1347 1369 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0002	0.016	15.9	0.6	1	23	72	94	72	94	0.98
2	16	0.0004	0.032	15.0	0.5	1	23	106	128	106	128	0.98
3	16	0.00018	0.015	16.0	6.2	1	23	134	156	134	156	0.98
4	16	0.81	66	4.6	0.1	1	9	212	220	212	236	0.68
5	16	0.024	2	9.4	1.2	2	23	242	264	242	264	0.97
6	16	0.71	58	4.7	0.9	1	20	309	328	309	330	0.86
7	16	0.064	5.2	8.0	0.1	1	23	452	474	452	474	0.96
8	16	7.2e-06	0.00059	20.5	0.8	1	23	483	505	483	505	0.99
9	16	0.00073	0.06	14.1	3.1	1	23	511	534	511	534	0.97
10	16	0.00044	0.036	14.9	3.0	1	23	867	890	867	890	0.97
11	16	0.00049	0.04	14.7	0.5	2	23	1095	1116	1094	1116	0.97
12	16	0.11	9	7.3	6.3	1	23	1122	1145	1122	1145	0.97
13	16	0.011	0.9	10.4	1.2	1	20	1173	1193	1173	1194	0.95
14	16	0.12	9.9	7.2	0.7	1	23	1251	1274	1251	1274	0.93
15	16	0.015	1.2	10.0	0.4	3	23	1321	1341	1319	1341	0.93
16	16	0.0066	0.54	11.1	5.9	1	23	1347	1369	1347	1369	0.98

Sequence Information

Coding Sequence: ATGCAAGGGGTCGTCTTCATGCCGCAGAATCCGCAACAGGGCTCGCCGCCGCCAAACAATCCTATAGTTGCTGGTATTACAATGGAGGTAGACTCCAAAGAGGCTTCAAAAAACCAAAGCAATCAAAGCGACTCAGGCGTCTTCTCTACCAACTCGACAATGGAAGCTTGCGAATCTGACAACCGCAGCGACTGCAGTTCTCCTGAAAGGAAGTTTGTTTGTCCGATCTGCGAAACGATTCTTACTTCACAACACGAGTTTACTTTGCATATTCGCTCGCATAATAACGAAACGGAAGTACAAGATGATAAAGGGTTCACGTGCAGAATTTGCTTTAAAGTCTTAAGCTCTAGCTCGAGTTTAGATAGGCATGTTTTGGTACACAGTGGAGAGAGACCGTTTCATTGTCGGTATTGCGGGGATACTTTTACCACTAATGGAAACATGCATAGACATATGAGGACTCATACGCAGAAAGGGGACAACTACGAGTCTGATGCTAGCTCAGACAGCAGCGTCAGCGGAGGCACAGAATTTAACAACAACAAAGTTGAGTCAAAGAAACGCAAGCTGGAAGCCATAGAGCACATGAGCAAGAAGCTAGAATCTTCTAGCGACAATGAAGGCCAGTTCTACAAGTGCCCCGTCTGCGATCGCACCGACTTTGACTCTATCATAGCCTTGGAGGCCCATCTAGGAGACAACCATCCTGACTATCCCGCCAAGTGCGGCCAGTGCAACCAACTCTTCCAAAACAACAAACTCTTGACAATTCACAAGAACACCGTCCataacaacatcaagaaacaCACGGTTGCTGGTTTCAAAGACCTCACATTTGTAGACTTCTCTAGCGAGAAGTTCCCACACATCGCGCGCTACGAATGCGAAAAGAATATTCACACAGCGTCGGAAGGCCTCAGCTTCCAATGCAAAACATGCTCGAGAGCATTCCCGTGTGGTAGCTCTCTGGAAATCCACGAGAAAAACTGCATAAGCGGGTTAGATCTCACCAAAACAACCCAAATATCGGAGAAAGATATCAGAAGAAGCGAGTTTTTCTCGAGATTAAACCTCCAAGACAACTCTCCAGAGAAATTCATAAGCGAGACTTCTAATAAGCTGAGACAACAGCTATTAGCGAAAGTCATCTCCAACGACACTAAAGATTTAGCGGATATTCAGTCGATAATTTCGATGACTACGAACGGGAGTCTGCTCCAACAACTGCAGACTAAGAATGAAGCCAACCTTTTGAAACCGAATTTGGACGATAGTACCCGCTCGGAACAAGACGAAGAATCTCAAGATCTCTTTGCGTTAGAGTTCCGTAAGATGAAACTGCGTGGGGAGTTTCCCTGTCGCTTGTGCACGGCAGTATTTCCTAATCTTCGTGCACTGAAGGGACACAACCGCGCTCATCTTAATGGTAACAACAACGGCATGTACCGGTGCAACATGTGTCCGCACTCTTCGATCGACAAGGCTGCTTTGATCCGACACATGCGGACACATAACGGGGATCGTCCCTACGAGTGTTCTCTTTGTAATTACGCATTTACCACTAAAGCCAATTGTGAGAGACACTTACGCAACAGACATGCGAAAACAACACGTGAAGAAGTAAAAAAGGCTATAATTTATCATCCTTCCGAAGACCCTACCAATGAGGAACTCAACAAGCTGACAAGAGACGAAGTCCGTAAAAGCGATTTAAGCCCTGAGAAGCTCACCCCGAAAATTACCGCTCCTGAGGTCCTGATTCCAAATCTACTAAAAGAGACATTGAATGCTCCCTTGCCCACAGAACCACCAAAGATGTTCTCGAATATTGGTGATATTATCCGCAGTGAAAATCTTAAGTCTCTCAAAGACCACCGACTGCAAAATGGTCAGCTCTCTCCGTACTTACCTCCATACAGTTTTTCCCCCAAGTCCTCCAACGTGTCTACTCCCCACTCTAAAATCCACGTGAAGAACTTGGAGGAACTGAAAGAAACTCCCACTGATCCCGAATACGACGAAGTCGATGAAGAACCCATGAATTTAGTCCTCGATTTGAGCAAAAAATCCGAGGAGAAAAAAGAGCCACTTCCTGAAGACTTATCTAAGAAATCACCACCTTCAATAATAAGGGATCTCTTCGCTCAGCAGCTCCTGAAAACAACATCCCCGAAGATCGACGCGTGGTACGCATCTCTTTATCATAACTCTTTCTCGGGATTCGCCAACTGGCCCGGGTTACCAATGAATCCTCTTCTTTTCCCGAGTCTACCACCTCCACTTCTCGCGCAAGAAACCCAAGATATCAAAGAACGCTTCCAGAGATACCAACTTTGCGGGGGTTCCATGATCAGTGATAACTTCTCCAAAAACTTTCCCAACAACAGTGTTTTCAACAAGTACCAAGATGAACCAAAGAAAAGCGAAAACATGAGGCCTTTAACGCTTAACATCGatgacaatttcaaaatgtccAGTCCTCTTCCTCCGCAAAAACCGGATTTAACTCAGTCCCCCAATTCTGTGAAGATGGTTATTAAGAACGGGGTTCTTATGCCAAAACAGAAACAACGAAGATACAGAACCGAAAGACCTTTCACCTGCGAGCATTGTTCTGCACGGTTCACTCTGCGCTCTAACATGGAACGCCACATTAAACAACAGCATCCTCAGTTCTGGTCGCAACGTCAAAGAGGTCATTTAAATACTCCAGGACGGAAGAGCCAGAAAAGTTTTTGTGATCTCAGCATTCCAAACTACGAAATAAAGTCTCAGGATTTCGAAGATACCAAAGAACACAACGAAAAGTTAAAGTTTGCAATTTTGGCGCAGCATTTGAGGGTAAATCAAGAAAAGaaagatgatgatgatgactgCGCTCTTGTGATTGACGAGAACGCAGACAAAAGCGAGATGAAGACTGAAAATAACCAAAGATTTGAAGGCGGTTTTGAGAGGAGCCGTATCTTGGAAGAGAAACTCAGAGAGCTGCATGCCAAACAGATGAAGaacgaaaagaaaaatgaagaaaatcaaGATTTGGTCCCGGTGGCGCGGTTGTTGGATAACGCGTCGCAACAGCAGTTTAAGGAGTATTTCAAGAGAGAAGGGGAAGAACCGGAAGTTGGGGGGGCAAGTGAGGAAGATGAAGAAGGGTTAGTGGCTAGCGGCAGCACCAGCGAGGGGAATGTCTCAGGAACAGACGAAAATAAGTCGGAGCCCGAGACCGCGGCCCCTGTAAAGAAAAAGTCTGCTTACTCCATGGCCCCCAATCGCGTCAGTTGTCCTTTCTGCAGCCGCAAATTCCCGTGGAGCTCCTCCCTCCGCCGTCACATCTTGACTCACACAGGCCAAAAGCCCTTCAAATGCAGTCACTGTCCTTTGCTCTTCACCACCAAATCCAATTGCGACCGTCACTTGCTCAGGAAGCACGGTAACAACGCTACGACCATCAGTAACGACGTGGTTAACAACAACACCAATTATCTGATGAGAAATGTCCCTGAGCGTCCTTTCAAATGCTCGAATTGCCCTAGTAGTACCTTCTCCACGTACTCCAACTTGAAGAAACACATTAGCTGTAAGCATTCGACCAACGCGCAAGGAGACGACATCAAAGCGCAAGGCTACGAAGCCGGAAGTTCCGAAGACGAAAAAGTCCCTTGCACCGACTCCAAAATCGACTGGGACTCCACTTCCAAACCCATGAACGAAGTACAGAACGTGATCCAAAATTCAGATCTACCTTTCAAGTGCCATTTGTGCGACGGCTCGTTTGCTGAACGCCAAGAGGCGCTTGACCACATCAAAGACAAGCATTACGCCGAGTATGACTTGTTAATGTCGAAAAACGCATTAGACAACAACGCCACGACCCCAGAGGAAAGTGCCCACCATGAAGACGAGGAAAACGACTTAAGAGGGAAATTCCCTGATTATTCCAACAGGAAGGTGATTTGTGCGTTTTGCATGCGTCGGTTCTGGTCCGCAGAAGATTTACGCAGACATATGCGGACTCATACCGGAGAACGCCCGTTCAGTTGTGACATCTGCAGAAGAAGATTTACGCTGAAACACAGCATGTTGCGTCATCGAAAGAAGCACAACATCAACTTTGATAATGAGGTTGTCAACAGCGATGAAGATGTTAACAACGCACCTACGAACTACGTCAAGGAAGCAAACCACGTACAAAAAGAGAAAACCGACGAATCGGATGGCAATGAAGGAAGTGATTTAATCAGCAATCTGTTAGGAATAAGAGACCGCTCTTTCATCGATAAAGTTCTGACGGCGTCCGCCGACGACGCGGCAAAGCTTTTAGGAGTCAAGAACGGAGTCAAAGAATAA
Protein Sequence: MQGVVFMPQNPQQGSPPPNNPIVAGITMEVDSKEASKNQSNQSDSGVFSTNSTMEACESDNRSDCSSPERKFVCPICETILTSQHEFTLHIRSHNNETEVQDDKGFTCRICFKVLSSSSSLDRHVLVHSGERPFHCRYCGDTFTTNGNMHRHMRTHTQKGDNYESDASSDSSVSGGTEFNNNKVESKKRKLEAIEHMSKKLESSSDNEGQFYKCPVCDRTDFDSIIALEAHLGDNHPDYPAKCGQCNQLFQNNKLLTIHKNTVHNNIKKHTVAGFKDLTFVDFSSEKFPHIARYECEKNIHTASEGLSFQCKTCSRAFPCGSSLEIHEKNCISGLDLTKTTQISEKDIRRSEFFSRLNLQDNSPEKFISETSNKLRQQLLAKVISNDTKDLADIQSIISMTTNGSLLQQLQTKNEANLLKPNLDDSTRSEQDEESQDLFALEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGMYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKAIIYHPSEDPTNEELNKLTRDEVRKSDLSPEKLTPKITAPEVLIPNLLKETLNAPLPTEPPKMFSNIGDIIRSENLKSLKDHRLQNGQLSPYLPPYSFSPKSSNVSTPHSKIHVKNLEELKETPTDPEYDEVDEEPMNLVLDLSKKSEEKKEPLPEDLSKKSPPSIIRDLFAQQLLKTTSPKIDAWYASLYHNSFSGFANWPGLPMNPLLFPSLPPPLLAQETQDIKERFQRYQLCGGSMISDNFSKNFPNNSVFNKYQDEPKKSENMRPLTLNIDDNFKMSSPLPPQKPDLTQSPNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGHLNTPGRKSQKSFCDLSIPNYEIKSQDFEDTKEHNEKLKFAILAQHLRVNQEKKDDDDDCALVIDENADKSEMKTENNQRFEGGFERSRILEEKLRELHAKQMKNEKKNEENQDLVPVARLLDNASQQQFKEYFKREGEEPEVGGASEEDEEGLVASGSTSEGNVSGTDENKSEPETAAPVKKKSAYSMAPNRVSCPFCSRKFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNNATTISNDVVNNNTNYLMRNVPERPFKCSNCPSSTFSTYSNLKKHISCKHSTNAQGDDIKAQGYEAGSSEDEKVPCTDSKIDWDSTSKPMNEVQNVIQNSDLPFKCHLCDGSFAERQEALDHIKDKHYAEYDLLMSKNALDNNATTPEESAHHEDEENDLRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNINFDNEVVNSDEDVNNAPTNYVKEANHVQKEKTDESDGNEGSDLISNLLGIRDRSFIDKVLTASADDAAKLLGVKNGVKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01568293;
90% Identity: iTF_00753253;
80% Identity: -