Basic Information

Insect: Cynaeus angustus
Gene Symbol: salm
Assembly: GCA_030157275.1
Location: CM058060.1:25145490-25150775[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3.6 2.9e+02 2.5 0.2 3 19 2 18 1 20 0.91

2 10 4.7e-06 0.00039 21.0 0.9 1 23 318 340 318 340 0.98

3 10 6.5e-06 0.00053 20.6 1.9 1 23 346 368 346 368 0.98

4 10 0.059 4.8 8.1 3.8 2 23 675 696 674 696 0.98

5 10 4.1e-08 3.3e-06 27.5 0.6 1 23 702 724 702 724 0.97

6 10 5.7e-05 0.0046 17.6 2.6 1 23 734 756 734 756 0.98

7 10 0.0086 0.7 10.8 2.4 2 23 1020 1041 1019 1041 0.97

8 10 0.074 6.1 7.8 1.3 1 14 1047 1060 1047 1061 0.93

9 10 1.3e-06 0.00011 22.8 4.0 3 23 1203 1223 1201 1223 0.96

10 10 1.9e-07 1.5e-05 25.4 0.9 1 23 1229 1251 1229 1251 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3.6	2.9e+02	2.5	0.2	3	19	2	18	1	20	0.91
2	10	4.7e-06	0.00039	21.0	0.9	1	23	318	340	318	340	0.98
3	10	6.5e-06	0.00053	20.6	1.9	1	23	346	368	346	368	0.98
4	10	0.059	4.8	8.1	3.8	2	23	675	696	674	696	0.98
5	10	4.1e-08	3.3e-06	27.5	0.6	1	23	702	724	702	724	0.97
6	10	5.7e-05	0.0046	17.6	2.6	1	23	734	756	734	756	0.98
7	10	0.0086	0.7	10.8	2.4	2	23	1020	1041	1019	1041	0.97
8	10	0.074	6.1	7.8	1.3	1	14	1047	1060	1047	1061	0.93
9	10	1.3e-06	0.00011	22.8	4.0	3	23	1203	1223	1201	1223	0.96
10	10	1.9e-07	1.5e-05	25.4	0.9	1	23	1229	1251	1229	1251	0.98

Sequence Information

Coding Sequence: ATGTGTCAACGATGTCAAGAACAGTTCACCGATGTTCAAGAATATTTAACGCACAAAGCTGAATGCGAGAAGAAAGCTATCAAACACGACGACCCTGCTCATTCCGATCCAGAAGATATGGTGGTGTCTGAAGAAGACGACGAAGACGACGAAACAGGTGGAAAGCGTCTAGAAAGGATGCGACGTCATCGACAGGACGCCGCCAACAACAACAGTGTTGAGGAAAATTCTCCCGACGAAAGCAGTGCGAGATTAACTTTTCCGTTTCCGATACCGTCAGCACCTGGTCACGTCACATTGGAAGCTCTTCAGAACACAAAAGTGGCAGTAGCGCAGTTCGCCGCGACTGCAATGGCGAATAATTCGGACAATGAAGCAGCTCTTCAAGAGCTCGCAGTGTTGCAATCTACGTTATTCACTCTGCAACACCAACAGGTTTTGCAATTGCAGTTGATTAATCAGTTGCAGCAACAGCTTCAGATTGACAGATCGAAAGCTGCGAGTCCAGTGTCGCCGCCTCCGTCTGAAAATGACGGGGAAACTGCTCCGGCGGAAGCTTCGCCGCCCCCTCAAAATCTTCCAGTGTCGCGAACACCCACTCCAGCGCCGATGGTGCAACCACCGCTTAGTCAATCCACTCCGCAACCTCCACCAGAAAACTCTGAGAATCAAATGACTGAAATCAATGTTCCTTGCTCTCTACCTCTGCAGTCTCAACACTGTTCCATATCGTCATCTTTAGCTTCAACCATCATCACTCACAATAACGAGCCACCTTCTCTAGACGAACCAAATACTTTAGAAATGTTGCAAAAGAGAGCTCAAGAAGTGTTAGACAACGCCAGTCAAGGGTTGTTAGCGACGAACTTGGCTGACGAATtagcttttagaaaaaacaaaggtTCGCTGTCGCCTTACGATTCGAAAGGACGTAACGAACCGTTCTTCAAGCACCGTTGTAGATACTGTGGTAAAGTTTTTGGGTCCGATTCGGCTTTACAAATACATATCCGTTCTCACACCGGGGAACGCCCCTATAAGTGCAATGTTTGTGGTAGTCGTTTTACCACGAAAGGTAATTTGAAAGTACATTTTCAAAGACATAGTGCAAAGTTTCCTCATATCAAAATGAATCCAAATCCGGTTCCCGAACATTTGGATAAATATCATCCGCCGCTGTTGGCGCAATTAGGGCAGCAACCCTCCTTGTCACCTGGTGGGCCTCCGCATCCTCCACATATGGGTTTTCCAGGAGGTCATCCTTTTCCACCGACTTCTTTACCCTTGTACAGGCCCCATGGACCGCCACCTCCGGACTTGTTAAATACTCGACTACAACCATCACCTCACAGACCACAAGACCCGTCACAGAGGCTTTTTCCACCGCATCCGCTGTTCATGAAACGGGAAGAGCAAGAAGCCCCTgaaaacttgagcaaacctcCAAGATCTCCAGAGAATCGATGCAAGTCTGAAGTGTCCGATGAAAAACGAGAATACAATGAAGACTTGCATTCAAATGTTCCTCAAATAACACCAAAACAAGAACCAAATGAAGACAATGATGGTGACCACGAACCTGAAAGATTTTCTTCACCGGCACCTTATGATGAATGCAGTATTGACAGTAGTAAGTACAGTAACGACGACATGTTGGGAACGAGGAGTCCTGGTGCAGATCACTCCGAAAACATGCAAGATGAGCCCGAGAATCTCTCCAACAAAAGTAGTTCTATCACAGTTCCTTTGAGTATTTCCACGGGTCAAAGACTCCCCGCGAATTTTACATTCGGTCAAGTGAGTTCACCCCCCAGTAGTACGTCATCGGGGAGTTTAGGACCGTTTCCTGGAACTGCATTGGTCGATCCAGCTAAAGATCCCGCTATCTACTCGAATTTGTTGCCGAGACCCGGAAGCAACGACAACTCATGGGAAAGTCTGATTGAAGTAACAAAAACTTCGGAAACTAGCAAACTTCAACAGCTAGTTGACAATATCGAACATAAACTTTCAGATCCGAATCAGTGTGTGATATGTCATCGAGTGTTGTCGTGCAAAAGCGCGTTGCAGATGCATTATCGAACTCACACCGGCGAACGACCGTTTAAATGTAAGATTTGTGGTCGCGCATTCACCACCAAAGGCAACCTTAAAACACACATGGGCGTGCATCGAGCAAAACCTCCAATGCGCGTCTTACATCAGTGTCCGGtttgccacaaaaaattcacgaACGCTTTAGTTCTGCAGCAACATATCCGCTTACACACAGGTGAACCCACTGATCTCACTCCCGAACAAATACAAGCTGCAGAAGTTAAAGACTTTCCTTCACCGGGAGGTTTTCCGTCGCTCCATAATTCCATTAATCCATTCCTAGGGCAAGGGTTTGCCGTTCCTGGGTTGTCTCCCCTGGGACACGCAGGACTTCCACTTGGCCAAAAATACGATAAATTCGAAAAAGACGAACACGAGTCGATGgatgacgacgacgacgacgacgacgaaaTAAGTAATTCTGAAAATCAAAACGCACCGTTTGCTTCATCACCGTCGGATATCCAAGGTCCAACAACCACCGCACCTTCTCAGTTGTCTGCAAGCGGACTCAGCTGTTCAGCGGAGGACTTGTGCTCAAATCGAACAGTGGCGTCCGCTTCACCTGTACAAAACGGTGAAAAGTCCCCTTCGCAGTCTGGAATCACCAGTCCAGGAAGTTCGGAAATTCGGTCATCTCCGAATCGTGTCACATCAACGCCCGTCCAGGTTCCACGTCCACCTTCTTCGCAGCAAGCCGGCAGTCCGACTCCTTCTGAGTGCAATTCTCTAGGTGCCCTAGATCTAACCCCTCGAACAAACCAGCCCTTGATAACGAGCCCCGGTCCCAGTCCGGGTCCTCCACCGTCTTTGTTTTCAACCTTTGGATTGATACCACCAGGTCAAGGTTCCACACCTTTGATGTCGTCAGCGTTGTCGTCGTTGACGTCGTCCGTTTTGACATCAACAGCGTTCAGTCCGTTGCGTTTAGCTGTTGGCCCACCAGGACGTGGGAACACCACCTGTAACTTATGTTTCAAAACTTTCGCTTGTAATTCAGCGTTGGAAATACATTACAGGAGTCACACTAAAGAGCGTCCTTTTAAATGTAGCGTCTGTGACAGAGGCTTCTCGACGAAGGACAGATGTATGTGCAGAGAGAGGCGTATCCAGGATGAAGATGAGCCTCGGAGAGCATGTAAACGGAAGCCTGCTCTTCGCAAGACAATACCATCGGTATTTCCGCTACCGATGAGCCCTGGATACGCCTCAAACTGGATGCATATCGCGGGTAATATGAAGCAACACATGTTAACACATAAAATAAGGGACATGCCACAACacatgtttgaaaataaacctcCTGTAAGTGGAGATGAATCATCGCAACAcacacaacaaaatttaccatCGAGGGAAAGTCAAGCAAGTGAAAATGAACAATCTAATCCACCCACACAACCTCCTGTAAGTGAGCAAAGTAAAGAGCAACCAGTTAAGAGGGAACCAACTGAGACTGAACTGCCCTTGCCAAAGCGTCCACCCAGCTTACAGGCCAGTAAGCACTTGTGCCACGTATGCAATAAGAACTTCTCGTCCAGCTCGGCCTTGCAGATACACATGCGTACGCACACGGGCGATAAGCCGTTCAGATGCACCGTGTGTCAGAAGGCCTTCACCACCAAAGGAAATCTAAAGGTACATATGGGAACCCATATGTGGAGCAACGGAGCATCGCGACGCGGTCGTCGCATGTCTCTAGATCTGCCTCCCATCCCCATGACACCCAAGGATTCCGAATTTCTGCAACGGAGACCAGACCTTTTTTATCCGTACCTACCGGCTCCATTCCTTAATGGCATGCAGCAAAAGCTGAATGAGATGTCAGTTGTACAGAATAATCAAAACGGAATGAGTGGAGCAGGCAAGTACAGTGGTCTATTGGGTTTCGGCTACCCTCCACCAGAGGCGTTGCGATCGCAGGGTGGTTCACCGGAGCGGCCCGAGAGGCCACCAAGTCGCGAGCCGGAATCCCGGAGTTTATGGGATCTCCATTTCGAACGGAAATCGGCCCCCGAAACCCCACGAGAAGAGCTACTGCCAGCAAGCAGAGAGGGTTTAGCTGCCTGA
Protein Sequence: MCQRCQEQFTDVQEYLTHKAECEKKAIKHDDPAHSDPEDMVVSEEDDEDDETGGKRLERMRRHRQDAANNNSVEENSPDESSARLTFPFPIPSAPGHVTLEALQNTKVAVAQFAATAMANNSDNEAALQELAVLQSTLFTLQHQQVLQLQLINQLQQQLQIDRSKAASPVSPPPSENDGETAPAEASPPPQNLPVSRTPTPAPMVQPPLSQSTPQPPPENSENQMTEINVPCSLPLQSQHCSISSSLASTIITHNNEPPSLDEPNTLEMLQKRAQEVLDNASQGLLATNLADELAFRKNKGSLSPYDSKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPYKCNVCGSRFTTKGNLKVHFQRHSAKFPHIKMNPNPVPEHLDKYHPPLLAQLGQQPSLSPGGPPHPPHMGFPGGHPFPPTSLPLYRPHGPPPPDLLNTRLQPSPHRPQDPSQRLFPPHPLFMKREEQEAPENLSKPPRSPENRCKSEVSDEKREYNEDLHSNVPQITPKQEPNEDNDGDHEPERFSSPAPYDECSIDSSKYSNDDMLGTRSPGADHSENMQDEPENLSNKSSSITVPLSISTGQRLPANFTFGQVSSPPSSTSSGSLGPFPGTALVDPAKDPAIYSNLLPRPGSNDNSWESLIEVTKTSETSKLQQLVDNIEHKLSDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVKDFPSPGGFPSLHNSINPFLGQGFAVPGLSPLGHAGLPLGQKYDKFEKDEHESMDDDDDDDDEISNSENQNAPFASSPSDIQGPTTTAPSQLSASGLSCSAEDLCSNRTVASASPVQNGEKSPSQSGITSPGSSEIRSSPNRVTSTPVQVPRPPSSQQAGSPTPSECNSLGALDLTPRTNQPLITSPGPSPGPPPSLFSTFGLIPPGQGSTPLMSSALSSLTSSVLTSTAFSPLRLAVGPPGRGNTTCNLCFKTFACNSALEIHYRSHTKERPFKCSVCDRGFSTKDRCMCRERRIQDEDEPRRACKRKPALRKTIPSVFPLPMSPGYASNWMHIAGNMKQHMLTHKIRDMPQHMFENKPPVSGDESSQHTQQNLPSRESQASENEQSNPPTQPPVSEQSKEQPVKREPTETELPLPKRPPSLQASKHLCHVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWSNGASRRGRRMSLDLPPIPMTPKDSEFLQRRPDLFYPYLPAPFLNGMQQKLNEMSVVQNNQNGMSGAGKYSGLLGFGYPPPEALRSQGGSPERPERPPSREPESRSLWDLHFERKSAPETPREELLPASREGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01330030;
90% Identity: iTF_01410203;
80% Identity: -