Basic Information

Insect: Cynaeus angustus
Gene Symbol: -
Assembly: GCA_030157275.1
Location: CM058060.1:22125224-22128525[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 7.5e-06 0.00061 20.4 1.3 1 23 174 196 174 196 0.98

2 12 0.0019 0.15 12.8 2.4 1 23 202 224 202 224 0.97

3 12 0.00014 0.012 16.4 5.8 1 23 230 252 230 252 0.98

4 12 0.00013 0.011 16.5 1.4 3 23 266 286 264 286 0.95

5 12 1.5e-05 0.0012 19.5 0.2 2 23 293 314 292 314 0.97

6 12 1e-06 8.2e-05 23.2 2.7 1 23 320 342 320 342 0.99

7 12 2.5e-06 0.0002 21.9 0.1 1 23 348 370 348 370 0.96

8 12 2e-06 0.00016 22.2 0.1 1 23 376 398 376 398 0.98

9 12 5.3e-07 4.3e-05 24.0 1.2 1 23 404 426 404 426 0.98

10 12 1.9e-06 0.00016 22.3 3.2 1 23 432 454 432 454 0.98

11 12 5.3e-08 4.3e-06 27.2 1.0 1 23 460 482 460 482 0.98

12 12 8.9e-06 0.00072 20.2 0.9 1 23 488 510 488 510 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	7.5e-06	0.00061	20.4	1.3	1	23	174	196	174	196	0.98
2	12	0.0019	0.15	12.8	2.4	1	23	202	224	202	224	0.97
3	12	0.00014	0.012	16.4	5.8	1	23	230	252	230	252	0.98
4	12	0.00013	0.011	16.5	1.4	3	23	266	286	264	286	0.95
5	12	1.5e-05	0.0012	19.5	0.2	2	23	293	314	292	314	0.97
6	12	1e-06	8.2e-05	23.2	2.7	1	23	320	342	320	342	0.99
7	12	2.5e-06	0.0002	21.9	0.1	1	23	348	370	348	370	0.96
8	12	2e-06	0.00016	22.2	0.1	1	23	376	398	376	398	0.98
9	12	5.3e-07	4.3e-05	24.0	1.2	1	23	404	426	404	426	0.98
10	12	1.9e-06	0.00016	22.3	3.2	1	23	432	454	432	454	0.98
11	12	5.3e-08	4.3e-06	27.2	1.0	1	23	460	482	460	482	0.98
12	12	8.9e-06	0.00072	20.2	0.9	1	23	488	510	488	510	0.97

Sequence Information

Coding Sequence: ATGGATATGAGTGTATATTTAACAGCTCCACTACGTCTGGATAAAATCTGCAGAGCTTGTCTGACAGAAAAAGGGGACATGAGACCTTTGTTTGGGGCTTGCCTTGACGAAATGTTGGTGTCATTTGCGTCAATTCAGgtGGAAGAAGGTGACGGCTTACCGAATCTCATGTGCGTACAATGCGTCTTACAATGTAGCAGAGCATATACTTTCAAGCAACAGTGTGAAAAATCTGATAATATATTGCGCCAGTACATTAGCGCCGAATTTCAgCAACAACTAGCAGAAACTTTGAGCGAACAACAAACGAAAGAAGAGTTACAAGGGCAGTTACAGTTTCCGGATAATATAGCGAATGTTGTTATTGAAGAAGGTATAACCGCTGAATTTGTTGCTTATAACGAAGCCGACGGCAGCGTTGTAGAGGTCAAACAAGATTTGTACACAATAGAAGCACCGCCCGAAATCGAAACTAGCGAAGGTATTAAAAGTGATATAGAACCTCAGACTAAGCTTAAGTATCATTGTACGAAATGTGATGAATCATTTGCCCTCAAAGTTGACCTAAAGGTTCATATGATGTCGCATCCTAAAGATCTAGACCATATTTGTCACGTGTGCAATAAAGGATTTCCTGAATCTCGAATTCTCaaaagacatttaaaaatacatcttGATAAAAAGCCACATCAGTGTGATCAGTGTCACATGTCGTTTGCAGAAAGTTCCAATCTAAGTAAGCACAAAAAGAAACATACTGGCGAATTGCGGAATATCACTGGAAAACCTCATCTGTGTTCCGTCTGTGGAAGAGCATTTAAGTGGGCTTCCAGTCTGTCTAAACACATGAAATATCATACGGGGCATAAACTTTTATCGTGCGATTATTGTGGGAAACAATACGTCGAAGCTCGTAGTCTACGCATTCACATCCGATCGCACACAGGCGAGCGTCCCTACACTTGTGAAGTCTGTCAAAAAACCTTCACGCAGATATGCAACCTCGAGAAACATTTACGTGTTCATACTGGAGAAAAACCCTTCCTTTGCCCAATCTGTGGAAAAggCTTCACTCAGTCTGGCTACGTTGGTATTCACATGCGAACCCACACCGGAGCTCGACCCTACGTCTGTCAAACTTGCGGAAAAGCATTCGCAGGATCCAACACCCTAACAATTCACCAACGTATTCATACGGGGGAAAAACCGTACATTTGCAACATGTGTGGAAAAGCATTTAGTCGTCACGAAACTCTAATAATACATACACGTTCGCATACTGGTCATAAACCGCATGTTTGTAGTATTTGCAAAAAGGGATTCACCTCTTCCGGTCATTTATCGGGGCACATGCGGACTCATACGGGAGAGAAACCTCATGTTTGTAATATATGCGGAAAAAAattcgCTGGTTCGAGCAGCCTAAAGGTCCACATGAGGAGTCATTCGGTGGAAAAGCCATTTATTTGCAAGCTGTGTGGTAAAGGATTTACTCAGTCGATTCTGTTTCAGCAACATTTAACGACACACAATACAGTTGACGACAAGACTCATGTTACAAAGATTGAAACTGTTCAAGTAAGAGATTTAATGTAA
Protein Sequence: MDMSVYLTAPLRLDKICRACLTEKGDMRPLFGACLDEMLVSFASIQVEEGDGLPNLMCVQCVLQCSRAYTFKQQCEKSDNILRQYISAEFQQQLAETLSEQQTKEELQGQLQFPDNIANVVIEEGITAEFVAYNEADGSVVEVKQDLYTIEAPPEIETSEGIKSDIEPQTKLKYHCTKCDESFALKVDLKVHMMSHPKDLDHICHVCNKGFPESRILKRHLKIHLDKKPHQCDQCHMSFAESSNLSKHKKKHTGELRNITGKPHLCSVCGRAFKWASSLSKHMKYHTGHKLLSCDYCGKQYVEARSLRIHIRSHTGERPYTCEVCQKTFTQICNLEKHLRVHTGEKPFLCPICGKGFTQSGYVGIHMRTHTGARPYVCQTCGKAFAGSNTLTIHQRIHTGEKPYICNMCGKAFSRHETLIIHTRSHTGHKPHVCSICKKGFTSSGHLSGHMRTHTGEKPHVCNICGKKFAGSSSLKVHMRSHSVEKPFICKLCGKGFTQSILFQQHLTTHNTVDDKTHVTKIETVQVRDLM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01278372;
90% Identity: iTF_01568249;
80% Identity: -