Cang004364.1
Basic Information
- Insect
- Cynaeus angustus
- Gene Symbol
- ZNF275
- Assembly
- GCA_030157275.1
- Location
- CM058059.1:18933552-18939704[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 38 0.0082 0.67 10.8 1.1 2 22 45 65 44 68 0.90 2 38 7.8e-05 0.0064 17.2 0.5 1 23 72 94 72 94 0.97 3 38 0.0022 0.18 12.6 1.3 3 23 102 122 101 122 0.95 4 38 0.22 18 6.4 0.8 2 23 128 151 127 151 0.95 5 38 0.0015 0.12 13.2 1.4 3 23 158 178 157 178 0.97 6 38 0.00074 0.06 14.1 0.1 1 23 183 206 183 206 0.94 7 38 0.00045 0.036 14.8 0.5 1 23 211 233 211 233 0.96 8 38 2.1e-05 0.0017 19.0 0.7 1 23 239 261 239 261 0.97 9 38 5.2e-06 0.00042 20.9 3.7 1 23 267 290 267 290 0.98 10 38 0.71 58 4.8 1.9 2 23 415 436 415 436 0.92 11 38 1.9e-05 0.0015 19.1 0.3 2 23 440 461 439 461 0.97 12 38 0.8 65 4.6 0.3 2 19 467 484 467 486 0.94 13 38 6.6 5.4e+02 1.7 6.1 1 23 494 517 494 517 0.96 14 38 4.6e-05 0.0037 17.9 1.8 1 23 526 548 526 548 0.98 15 38 3.4e-07 2.7e-05 24.6 0.3 3 23 556 576 555 576 0.98 16 38 3.1e-06 0.00026 21.6 2.9 1 23 582 604 582 604 0.98 17 38 7e-07 5.7e-05 23.6 0.8 1 23 610 632 610 632 0.98 18 38 0.0037 0.3 11.9 2.0 1 21 638 658 638 659 0.93 19 38 0.22 18 6.4 1.8 2 23 729 753 728 753 0.96 20 38 0.052 4.3 8.3 1.4 2 23 762 783 761 783 0.93 21 38 0.00038 0.031 15.0 0.3 2 23 787 808 787 808 0.96 22 38 0.072 5.9 7.9 0.3 2 20 814 832 814 834 0.92 23 38 8.6e-07 7e-05 23.4 0.9 2 23 851 872 850 872 0.96 24 38 1.1e-05 0.00093 19.8 0.6 1 23 882 904 882 904 0.97 25 38 7.4e-05 0.006 17.3 1.4 1 23 908 930 908 930 0.98 26 38 3.3e-05 0.0027 18.4 0.4 1 23 936 958 936 958 0.98 27 38 2.1e-05 0.0017 19.0 1.5 1 23 964 987 964 987 0.96 28 38 1.9e-05 0.0016 19.1 3.6 1 23 993 1017 993 1017 0.93 29 38 0.013 1.1 10.2 1.3 2 23 1039 1061 1038 1061 0.95 30 38 4e-05 0.0032 18.1 0.6 1 23 1066 1088 1066 1088 0.95 31 38 0.0057 0.46 11.3 1.6 1 23 1094 1116 1094 1116 0.96 32 38 0.25 20 6.2 0.3 2 23 1122 1145 1121 1145 0.94 33 38 0.0088 0.72 10.7 1.2 2 23 1151 1172 1150 1172 0.96 34 38 0.00022 0.018 15.8 0.4 1 23 1177 1200 1177 1200 0.91 35 38 0.0037 0.3 11.9 1.3 1 21 1205 1225 1205 1227 0.93 36 38 7.7e-05 0.0063 17.2 0.2 1 23 1233 1255 1233 1255 0.94 37 38 0.00017 0.014 16.1 0.8 1 23 1261 1284 1261 1284 0.96 38 38 3.1e-07 2.5e-05 24.8 0.9 1 23 1290 1313 1290 1313 0.97
Sequence Information
- Coding Sequence
- ATGGCTATAAAACGTAACTTTACAAACGGGAAATGGGACCACGACTACTGCAACGAATCACATCAACCCAAATTCGACTCTTCTGTTACCCACCCACGGAAATCCCGAAAAGATCGTGTCGTCCGAAGTAAAACATGCTCAGAATGCAATCAAACATTCGAAAAATACGCTTTGCTCATGGAACATCGTAGACTAACCcgacatcgaaaaaaatttgtttgtttaacgTGTAACAAACAGTTCATAAGAAAAATCAGTCTCCAGATCCACATGGAATTGCACGACAACAAAACGTCTCCCATTTGTGACATTTGTGGTCAGTGTGTGAAAAACACTTATCAACTCAGAGCACACCGATTTCTGCATTCCATTCAAGGCAAAAAGTGCCCAGACTGTgatttgatttataattttacatctACCACGGCTTTCTATGAACACCGAAATCGTCATAAAGGGGAGACTGTTTTGTGTGAAATATGCTCGAAACAGTTTCCGTCTTGGGATTGTTACCGAAAACACGTGAATTTGCATAGTGGGAAGTCTTTTCCCTGTGACTTGTGCGATAAAGTGTTTAAGTCGGCACTAGGTCTTTCTGATCATAGGAATGCGATTCACCTTAAAAAGGCGCATATTTGTGAAGTTTGTGGTAAAGGAATGAGGACTAAAGGTTATCTAAAGGTGCATTTAAGGGCTCATAACGGGGAAAAAAGTCATGTGTGTGGAAAATGTGGAAAGAAATTCATTATGCGACGAGCTTTAATGCGTCATATGGCTGTACATTGTGAGGAAATGCCTTTCAAGTGTGAACATTGTTCGAAGACGTTTAGAACTGCTCAAAATTTGAGTGTTCATCAGCAAAGAATGCACTCAGATAACAAACCACACAAaTGGGACCACACATACACCTACAAGCAGCCGAAGATATTCCGTTCGTTGAAAAAACAGAGAACTCCACACTTTGAGGCAGTTTGGATCTCCAACGGACAACAACCTAAGTCATTCCAAACTGAACGTGTTCTTTACCATATTTCGCAAAGTGCTCTTACTCACATAGCCCAAGGTACTTCTGATAAGATACCTCCAAAACCGTCTCCCATGGCATTAAAAAACCAACAGTTTCTCGATTCGATCAACGGAAAAAAGTGTGTTAATTGTGATTTAATCAACAATTTTGCTACAATAAAAGAATACTTTGAACATGAAAAACAAGATATCAGAGAAGCTAGAATGACAATGCGCAAGTGTGAAGAATGCGGGAAATTATTTATGGGAAACAAGTTAAAGTGGCATCTCCGCGCTTGCCATTTGAACAAAGAGTGTGATATATGCGGGAAAGTATTTAAATCTCTGGCTGGATACAACAACCATAGACTAACTCATGAGATTATTAAACCAGAATGTGAGAAATGCGGCATTAAAATGGAATCTTGGGACGCTTTAAAGAGCCACTCGTGCGATTTTACGGGGAGCAAACCTTACAAGTGTTGTACATGCGGAGAACTATTCAAATGTGACATGACTTTGAAGAAACATCTTCTTAGAAGCCACTGTCCTGACGAAGAACTGAAACCTTACGAATGTGAGATTTGTCACAAAAGATTTACTACTAAATACAGTCAAGTGGCTCACGTTAGGGGACATACTGAAAAATTCAGCGCTATTTGTGAAGTTTGCGGTAAAACTTATCGTAGTTCTGAAAACTTAAGATTGCATATGCGTATCCATACGGGATATAAGCCTTTCGTGTGTTCTGAATGCGGAAAAGCGTTTTCGAGAAAGTGTAGGCTTATCAAACACAGACGAGTCCATACTGGAGAAAAAGGTTTTTCTTGTGAAACCTGTGGGAAAAGCTTTGCTCAAAAAGAGTCGCTTGAAGTACATCGGAGATATCATACAGGAGAGACACCCTATGAGTGCCATGCGTGTAAGAAAAAGTTTGTCAGCAAGTGGAGTTTGAAGTTACATTCGAAAAGGTGTTGGGAATCCCCCGGTAAATTAAAatgggACCACACATATACGAACAATCAGCCGAAAGTCGGGATTCTCGCTCATTTACTTCTTGGTCACAAGTCAGAAAATGCTCACATGCCACAAACGATTTTTGGCACAAAACAATCTTCTGTTAATCTTACTTCAGCGGAAATAAAAGGTCAAAAGTTTCTTAATGCAATCAACGGAAAACAGTGTTCAAAGTGCGGATccattaacaattttacaacattaaaagatttttttgaccaTCAACGCAAAGACCACAATGAagccaaaaagaaaaaagttatgtGTGAACATTGTGGACGATTATTTTCGAAAGGTCAGTATAGGATGCACATCAGCAATTACCATACGGAAAGACAATGTGGGATGTGCGACAAAGTATTTAAGTCTTTAGTAGATTACAACAACCACTTGACTGAACATGAGAACACTTCACCAGAATGCGCACAGTGTGGCTTAGTATTTGTTTCGTTGGACAAGTTAGACaaacatttttgcattttcgaaGAGGACCccgaaaaacagaaaagtgaaaaagataaaagttGCGTGTGCAGTGAATGTGGAAAAGTGTTCAAGGCCAGCGCGAATTTAAAGGCACACTTAAAAACCCATTCCAGGGATGAATGTAAACTGAAAGCGTTCGAATGTGAGATTTGTGGCAAGAGATTTACCACCAAGTACAGTCAAATGGCGCATGTCAAAGCGCAtacccaaaaatttatttgtgaaaaatgtgGTTCTACTTGCAGCAGTGAAGAGAGTCTGAAAATGCATATGCGAGTTCATACGGGAGATACCCCGTTCCGGTGTTCTGTATGTGGAAGAGGATTTCCGACGAAGACCAGACTTAGGTCTCACTTGATAGTGCACACCGGAGAAAGACGATTTTCTTGCGAAATTTGCGACAAAACGTTTGCTCATAAACCTGCACTTGTTGTGCACCGAAGACATGTGCATACAGGAGAACAACCCTTCGAGTGTCACTTGTGCAACAAACGGTTTTTTAGGAAGTGGAATTTAACGGTCCACTTGAGGAGaaCGGATCATGACTACTTAACAGTTTCTTCCTCATCTCAAAGTAACAGAAAGCGTAAACCAGTCTGGAGCAAAACTTGCGGCGAGTGTAACCAAACAttcgaaaaatacaaaatgttagTACAACATCGCAAAGAATCTCATCCtcgtaaaaaattcttatgcTCAACTTGTGGCAAGCAATTTGGTAAGAAAGCGAATCTTCTTATGCATATGGAAACCCACGACGATAAAATCACCTACACATGTGACACATGCAGTCAGTCTCTCACCAGCACCTACCAACTCAGAGCTCACCGATTTCTTCATTCTATTCAAGGCAAAAAGTGCCCAGATTGTGATCTAATTTACAACTTCACCTCCGCTACAGGATTTTACGAACACCGAAATCTTCACAAGGAAAATTCTTTAGTCTGTGAAATCTGTTCGAAGCAGTTATCAACTTTTAACAGTTACCGCAAGCATCTCAAACTTCACGATGCTAAAACTTTTCCGTGTACTTTTTgcgaaaaagtttttaaatcagCGGAGGGATTTAGACGCCACAGAGACGCAATTCATTTGAAAAAGACTCATATATGTGAAGTTTGTGGTAAAACTCTGAGCTCAAGAGCCGCTCTAATGCTTCATCTGAAGTGTCATAATGGGGAGAGACGTTATTTGTGTGGAGAATGCggaaaaagatttattttaaggaaaaatttaatgagtCATATGGCTGGACATTCTAACGAAAAGTCCTTCATGTGTGAATTCTGTGACAAACGATTTAATCTTGCTAGCAATTTGTCGCTTCATTGGCAAAGAATGCATTCTCACGATAAACCGTATAAGTGTGGATCGTGTGGAAAAAGTTTCGTGCGACAATCTCTTCTAAACAGGCATTTGAAGCAGGTGCACCGAGGAGAAAAGTCGAATTAA
- Protein Sequence
- MAIKRNFTNGKWDHDYCNESHQPKFDSSVTHPRKSRKDRVVRSKTCSECNQTFEKYALLMEHRRLTRHRKKFVCLTCNKQFIRKISLQIHMELHDNKTSPICDICGQCVKNTYQLRAHRFLHSIQGKKCPDCDLIYNFTSTTAFYEHRNRHKGETVLCEICSKQFPSWDCYRKHVNLHSGKSFPCDLCDKVFKSALGLSDHRNAIHLKKAHICEVCGKGMRTKGYLKVHLRAHNGEKSHVCGKCGKKFIMRRALMRHMAVHCEEMPFKCEHCSKTFRTAQNLSVHQQRMHSDNKPHKWDHTYTYKQPKIFRSLKKQRTPHFEAVWISNGQQPKSFQTERVLYHISQSALTHIAQGTSDKIPPKPSPMALKNQQFLDSINGKKCVNCDLINNFATIKEYFEHEKQDIREARMTMRKCEECGKLFMGNKLKWHLRACHLNKECDICGKVFKSLAGYNNHRLTHEIIKPECEKCGIKMESWDALKSHSCDFTGSKPYKCCTCGELFKCDMTLKKHLLRSHCPDEELKPYECEICHKRFTTKYSQVAHVRGHTEKFSAICEVCGKTYRSSENLRLHMRIHTGYKPFVCSECGKAFSRKCRLIKHRRVHTGEKGFSCETCGKSFAQKESLEVHRRYHTGETPYECHACKKKFVSKWSLKLHSKRCWESPGKLKWDHTYTNNQPKVGILAHLLLGHKSENAHMPQTIFGTKQSSVNLTSAEIKGQKFLNAINGKQCSKCGSINNFTTLKDFFDHQRKDHNEAKKKKVMCEHCGRLFSKGQYRMHISNYHTERQCGMCDKVFKSLVDYNNHLTEHENTSPECAQCGLVFVSLDKLDKHFCIFEEDPEKQKSEKDKSCVCSECGKVFKASANLKAHLKTHSRDECKLKAFECEICGKRFTTKYSQMAHVKAHTQKFICEKCGSTCSSEESLKMHMRVHTGDTPFRCSVCGRGFPTKTRLRSHLIVHTGERRFSCEICDKTFAHKPALVVHRRHVHTGEQPFECHLCNKRFFRKWNLTVHLRRTDHDYLTVSSSSQSNRKRKPVWSKTCGECNQTFEKYKMLVQHRKESHPRKKFLCSTCGKQFGKKANLLMHMETHDDKITYTCDTCSQSLTSTYQLRAHRFLHSIQGKKCPDCDLIYNFTSATGFYEHRNLHKENSLVCEICSKQLSTFNSYRKHLKLHDAKTFPCTFCEKVFKSAEGFRRHRDAIHLKKTHICEVCGKTLSSRAALMLHLKCHNGERRYLCGECGKRFILRKNLMSHMAGHSNEKSFMCEFCDKRFNLASNLSLHWQRMHSHDKPYKCGSCGKSFVRQSLLNRHLKQVHRGEKSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -