Basic Information

Insect: Cynaeus angustus
Gene Symbol: SCRT1
Assembly: GCA_030157275.1
Location: CM058059.1:20144837-20150725[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00054 0.92 9.9 0.7 16 38 259 278 254 283 0.88

2 5 0.026 45 4.5 0.5 17 28 291 302 281 315 0.79

3 5 0.004 6.9 7.1 0.3 17 28 317 328 305 340 0.81

4 5 0.00019 0.33 11.3 0.4 19 41 347 366 335 368 0.88

5 5 0.019 34 4.9 1.4 14 43 370 396 365 397 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00054	0.92	9.9	0.7	16	38	259	278	254	283	0.88
2	5	0.026	45	4.5	0.5	17	28	291	302	281	315	0.79
3	5	0.004	6.9	7.1	0.3	17	28	317	328	305	340	0.81
4	5	0.00019	0.33	11.3	0.4	19	41	347	366	335	368	0.88
5	5	0.019	34	4.9	1.4	14	43	370	396	365	397	0.88

Sequence Information

Coding Sequence: ATGCCGCGCTGCCTCATGGCTAAGAAGTGGAAGGCGTATCCGTGGCCGGAGCGACCGGAGCCACCCGACCAAGATGAGGACGAGGAGATCGACGTCGTGGGGGATGCTCCTTCGTGTTGGGGACCTTCGAGTCCTACGGCGGGCGCCACGGCGCCGAGTCCACCGCCGACGTCGCCGAACGGAACCACGCTCGTCTACAACGGCTACCTTCACGAATTTTCTCCTTCAACCTACACCACCACAACCTTCATACCACGCAACGACCAACCCTTAAGCGGCCAAACACAACCATCATACGCAACTTTGCGAACCGTGGTAGAAACGCAAGATCTCCGCCCTGAATACAGCACTCCAACTCCGACCGCCGTCCCCCGTTCTAGGAAATCGTTGTCGATGACCTTTACCAGTACGGGAACTGCCCTTTCTTTGCCTCCCAAAAAGAAGGACATCTACCGACCGTACTCCCTGGATGATAAACCCGCTCCACCGCCTCTCCCTCCTGCCATTCGAGTACCTGCCGAAGAAGACCTACACGCAGCGCACGCTATTCTTGATTTAAGTGCATCGACGACGGTATTTCTAccaccgccgccgccgcctccgGAAGAACGACGAGAGACCGACGAGAGCGTTATTCACACCACCCCCACGAAGTCTGGTAAGACTATCGCTTACACGTACGAGGCCTTCTTCGTGAGCGACGGAAGATCGAAGAAGAGATTTAATGTTGAAGATCCTGCACTCACAGGGAAGAGTTTGGGGAACGAAAAACCGAAATATACCTGCAGCGAATGCGGGAAGCAGTACGCTACTTCGAGTAATCTGTCAAGGCACAAACAAACGCATCGTAGCCTTGATTCTCAATCGGCAAAGAAGTGCATGACGTGTGGTAAGGCGTACGTGAGTATGCCGGCCTTGGCGATGCACGTACTTACGCACAAATTGGCGCACCGATGCGGCGTGTGCGGAAAACAATTTTCGAGGCCTTGGTTACTGCAAGGCCATCTAAGGTCGCACACGGGAGAGAAGCCGTACGGCTGCGCACATTGCGGAAAAGCCTTTGCGGACAGGTCAAACCTGCGCGCGCATATGCAAACGCATTCTGCcgacaaaaatttcgagtGTCCGAGGTGCCATAAGACATTCGCGTTAAAGTCGTACTTGAACAAACATCTGGAGTCGGCGTGTTTGAAAGAGGAGGCGCCACCTCCGACGCAGAGTTGTGCCGAGGAGGTGGCCAGGGAGGTGCCCGTGCCCATAAGGGTGTACGCGGCCTGA
Protein Sequence: MPRCLMAKKWKAYPWPERPEPPDQDEDEEIDVVGDAPSCWGPSSPTAGATAPSPPPTSPNGTTLVYNGYLHEFSPSTYTTTTFIPRNDQPLSGQTQPSYATLRTVVETQDLRPEYSTPTPTAVPRSRKSLSMTFTSTGTALSLPPKKKDIYRPYSLDDKPAPPPLPPAIRVPAEEDLHAAHAILDLSASTTVFLPPPPPPPEERRETDESVIHTTPTKSGKTIAYTYEAFFVSDGRSKKRFNVEDPALTGKSLGNEKPKYTCSECGKQYATSSNLSRHKQTHRSLDSQSAKKCMTCGKAYVSMPALAMHVLTHKLAHRCGVCGKQFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSADKNFECPRCHKTFALKSYLNKHLESACLKEEAPPPTQSCAEEVAREVPVPIRVYAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01481193;
90% Identity: iTF_00415390;
80% Identity: iTF_00415390;