Basic Information

Gene Symbol
Kdm5
Assembly
GCA_030157275.1
Location
CM058066.1:15253065-15260045[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.8e-26 8.9e-23 80.8 0.0 2 89 111 195 110 195 0.95
2 3 5.5 1.8e+04 -3.5 0.0 48 76 796 822 794 832 0.65
3 3 0.41 1.3e+03 0.1 0.0 32 79 1230 1276 1219 1286 0.72

Sequence Information

Coding Sequence
atgacCACAAAACTGGATAAGACAACCAGTCCTGTTAAAACTCATGGCAACGCGAAAAACGCACCTAAACACGACTCAGGATATGGCTACAAAGAAGAAACCTTCGAATTTGAACCACCTCCTGAAGCACCAGTCTTTTTCCCAACTgaagaagaattcaatgatCCACTAGAATATATCAacaaaatacgaaaatatGCAGAAGGATCGGGAATTTGCAAGATTAAACCGCCTCCAaattggCAACCACCTTTTGCCGTGGATGTTGACAAACTCAGATTCACCCCCAGAATACAAAGACTAAATGAATTAGAGGCAAAAACTCGCGTCAAACTCAATTTCCTTGACcaaatcgcaaaattttggGAACTCCAAGGTTCCACGTTAAAAATCCCAATGGTAGAAAAACGTTGTATTGACTTGTACACGTTACACAGCATTGTACAGAGTCAAgGTGGTTTTGAACAAGTAACCAAAGACAGGAAATGGTCGAGGATTGCCATTAACATGGGATATCCTCCTGGTAAAAGTAGTATAGGTACCATTCTTAAAACCCATTATGAAAGGTTACTCTACCCTTTTGACCTTTTCAAACAaggaaaaacattaaacttcAAAATGGCATCACCAATcaatgaagaaaatgaaaaagcaGACAAAGATTATAAACCACATGGGATCGTAGGCAGGATGGCCATCAAACCACCACCGGAGAAGCACGCCAGGCGCTCCAAAAGATTTGAGGTTGATCCCAAGTTGGAGGATGACATTAAAGAAGAGTGTAAGGATGATAATAAGGAGTTAAAACGTCTCCAGTTCTATGGAGCGGGACCGAAGATGGCGCTTAGTAAAGATGAAGAGaagagaaataataaaacagtcAATTATGATTTTGATCCATTGGCGAAATACGTTTGTCACAATTGCAACCGTGGCGACTCTGAAGAATATATGTTGCTTTGTGATGGTTGCGATGACAGTTATCATACATTTTGTTTAATGCCACCACTGAACGAGATCCCAAAAGGTGACTGGCGTTGCCCGAAGTGTGTCGCCGAAGAAGTATCCAAACCAATGGAAGCTTTCGGTTTTGAACAAGCCCAACGCGAATACACTTTACAACAATTCGGGGACATGGCTGACCAGTTCAAATCGGAATACTTCAACATGCCCGTTCATGTGGTTCCAACAAGTGTCGTCGAGAAGGAATTCTGGCGCATCGTCTCTTCAATCGATGAAGACGTCACCGTCGAATACGGCGCTGATCTTCACACAATGGACCACGGTTCGGGCTTCCCCACTAAAAcctctttgaatttattaccAGGAGACAAAGAGTACGCCGATTCTGGGTGGAATCTGAACAATTTACCCGTTTTGGAGAATTCTGTTTTGGGTTATATCAATGCTGATATATCTGGGATGAAAGTTCCTTGGATGTATGTTGGGATGTGTTTCGCTACTTTCTGTTGGCACAATGAAGATCACTGGAGTTATTCTATCAATTATCTTCACTGGGGCGAAGCTAAAACATGGTATGGAGTTCCTGGAAAAATGGCCGAAGCGTTTGAAGAGACCATGAAATCGGCAGCGCCTGAACTGTTTCAGTCGCAGCCGGATTTGTTGCATCAGTTAGTTACGATAATGAatccaaatattttgatgaaagCTGGAGTTCCTGTTTTCCGCACCGATCAACATGCGGGGGAATTTGTTGTTACTTTTCCGAGGGCTTACCATGCGGGATTCAATCAAGGATACAATTTTGCCGAAGCTGTGAATTTCGCCCCCGCTGATTGGCTGAGAATGGGCCGCGAATGCATCCTTCATTACTCAAACCTGAGACGTTTCTGTGTATTCTCCCACGACGAATTGGTTTGTAAAATGGCTCTGGATCCTGACAAGTTAGGATTAACAATCGCAGCTGCTACATACCAAGATATGTTACAAATGGTAGAAACTGAGAAAACCCTCCGGAAAAATCTCTTGGATGCGGGGGTGTCAAATGCTGAACGTGAAGCTTTTGAGTTGCTTCCTGACGACGAGAGACAATGCGACACATGTAAAACTACATGCTTCCTTTCTGCAGTAACATGCAAATGCTCCCCTGATGTGCTTGTTTGTCTTCGGCATTATGCTAATTTATGCAGTTGTCATCCAGAAAACTACACTCTTCGTTATCGTTACACGTTAGATGAGTTACCTGTTATgctgaaatctttaaaactgaAGGCTGAGTCGTTTGATCACTGGGTTAATCGTGTGAAGGATGCTCTGGATCCCAAGACTCCAAAAACTCAAACATTGCAAGAGTTAAAAGCGTTGTTGAACGAAGCAGACGGGAAGAAATTCCCGAAGTGTGATCTGCTTCAAACTCTAACAGATGCAGTGGAAGACGCTGAGAAATGCGCAAGAGTTATCCAACaattagatttaaataaaatgcgtACAAGAACTCGAAATTCATCCGACACAAAGTACAAACTGACGTTAAAAGAGTTAATTCTATTTCATGAAGAATTAGATAGTTTAGTCTGTGTTTTAGAAGAAGCGAAGAGTATTAAAGAGTTATTAGAAgagactaaaaaatttgaaacgactagtaaaaatttattagatatgAAGTTGAGTGAATGCTTGATTACGGACTTAGAAGCTTGCATTAGTCAAGGAAATAATTTATGTATAGAACTTCCGAATTTACGTAGTATTAAAATAAGGTCACGTCAGTGCATTTGGCTTAACGACGTTCTGtcttacaagaaaaaaacggaGGTCTTGGGGCTTGAATCGATAAAGAACATCATCAAAACCGGTAGCCAATTACCGCCCAATCCGGAGATCGAGAATGAGCTAAGTGAACTACAAACTTTACTGGCGAGAAGTGAAGAATGGGAACAAAAAGCCCAAGCAATTCTCAAAGACACAGGAAGCGAAGTTCTCATCGAAGTCGACAAACTTCTTAAAGAAGCTGGACAAATCAATTCGTATCTTCCATCAGAAGAGTTCCTTTTTGAAGCCATGGACCGTGCTCGAGACTGGCTACGACAGCTTGAAGAAATGAATTCAGCAGAATGTTATCCGTATTTCGACGACATGGAAGAGCTGATCAAAAAAGGTCATCAACTAGCTCTTCATTTAGTAGAAGTCAGCAAGTTGGAGTCATACCTTGAAACTGCTAACTCTTGGAAAGAAAAAACCAGTCGCGCTTTTTTGCGGAAGAACTCTACGTTTAATTTGATGGAGGCGTTGTCACCGAGAATTAACATGACTAGCGGTCCGAAATGTCGGAGGAAAAACCAAGATGAAGAGCATGGTATCTTTAACTTAACCAGTGATATGGACCCAGCAACGGTGGTGTCTTTGTTTAAAGAAGCCGAACAAAAAGAAATGGAATTGATTAGAACTGTACGCGGCGCGAACATGGAGAAGAGCATGGATCCGAATGATTGTGCCTCTTTTTGCGTCTGCCAGAGAAATTTATTCGGTATGATGATGCAATGCGAGCTTTGTAAGGACTGGTTTCATTCTAACTGTGTCTCCCTTCCTAAAGTTGCGTCTTCAAAGTACAAAGGAAATTTCACAAGCGTCGCACTTCATTTGGGATTCAAAGACTGTAAATTTCTCTGTCCCAATTGTTTCAGAACGAAACGTCCTCGTTTAGACGCTATTCTTTTACTCTTGATGTCATTACAGAAGTTATGTGTCAGAGTACCGGAAGGAGAAGCCTTACAAAGTCTGACTGAGCGCGCAATGAACTGGCAAGATCGTGCGAGACAGCTGATGCAACAACCCGAACTTGAAGCAGCTAAAAACAAGTTATCTTCTTTCAGTCAGAAATATTCAGAAGCAGCAGCGAAACAAAGGACCGAAAAAATCATCACCAGTGAACTAAAACGTGCTTACAAAAATCCGGAACTTCACCAGAGAGTACAAGAGATCGCACCTTACAGTGGAGTTAGCCAAGACGAccacaaaaatgaagaaaccaACATCACAGACTCTTCGGATGATTCTAAAGGGTACGCATCAGCGGACGACAGAATGGGAGAACATGCGTACTCGCTACACTTCCCGAAATTCGACAACAATGAATACAGACTACAGATACCTGCCGATATCAAGAAACAAATCGAGGAACTTCTAATGGAGGGAGATTTATTAGAAGTGTACCTGGACGAGACTTTCCAGTTATGGAAGTTACTACAAGCATCGCGAGATCCGGAGAAAGAAGCGATTCTGATCGATTTCGATATGCATTCGAAGACGGCGCCGTCGAAGCGTGGCCGCAAACGTCGTTCCGACGAGGTGGAGATGTTAAGGAAGACGAAAGTAAAGACCGAAATCgaaactaagaaacttaaACCACagaaaaccaaagaaaattCACAAGGGAAGAAGGAAGGGACACGTCGTAAAGGTCGTCGTCGTCAGTCAACCGGTTCCGAAGATGATGACGAAGACAGTTGTGCAGCGACCGGATGTCTAAAACCTTCTGGAGAGAATGTCGATTGGGTTCAATGTGACGGAGGATGCGACAAATGGTTCCACATGGCTTGTGTTGGTTTATCAGCGCAAGATATATGTGAAGATGAAGACTACATCTGTATGACCTGTTCGCAAAATACCTATGGAACACTGAACAACATGGATAGTTTGTCATCTGTCAGTTCCGAATGTTCCACTCTAACCCAGCCTTCCACATCTAAAGACTCTGTTCAGTGCAAATTTTAG
Protein Sequence
MTTKLDKTTSPVKTHGNAKNAPKHDSGYGYKEETFEFEPPPEAPVFFPTEEEFNDPLEYINKIRKYAEGSGICKIKPPPNWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSTLKIPMVEKRCIDLYTLHSIVQSQGGFEQVTKDRKWSRIAINMGYPPGKSSIGTILKTHYERLLYPFDLFKQGKTLNFKMASPINEENEKADKDYKPHGIVGRMAIKPPPEKHARRSKRFEVDPKLEDDIKEECKDDNKELKRLQFYGAGPKMALSKDEEKRNNKTVNYDFDPLAKYVCHNCNRGDSEEYMLLCDGCDDSYHTFCLMPPLNEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGDMADQFKSEYFNMPVHVVPTSVVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSLNLLPGDKEYADSGWNLNNLPVLENSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGKMAEAFEETMKSAAPELFQSQPDLLHQLVTIMNPNILMKAGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECILHYSNLRRFCVFSHDELVCKMALDPDKLGLTIAAATYQDMLQMVETEKTLRKNLLDAGVSNAEREAFELLPDDERQCDTCKTTCFLSAVTCKCSPDVLVCLRHYANLCSCHPENYTLRYRYTLDELPVMLKSLKLKAESFDHWVNRVKDALDPKTPKTQTLQELKALLNEADGKKFPKCDLLQTLTDAVEDAEKCARVIQQLDLNKMRTRTRNSSDTKYKLTLKELILFHEELDSLVCVLEEAKSIKELLEETKKFETTSKNLLDMKLSECLITDLEACISQGNNLCIELPNLRSIKIRSRQCIWLNDVLSYKKKTEVLGLESIKNIIKTGSQLPPNPEIENELSELQTLLARSEEWEQKAQAILKDTGSEVLIEVDKLLKEAGQINSYLPSEEFLFEAMDRARDWLRQLEEMNSAECYPYFDDMEELIKKGHQLALHLVEVSKLESYLETANSWKEKTSRAFLRKNSTFNLMEALSPRINMTSGPKCRRKNQDEEHGIFNLTSDMDPATVVSLFKEAEQKEMELIRTVRGANMEKSMDPNDCASFCVCQRNLFGMMMQCELCKDWFHSNCVSLPKVASSKYKGNFTSVALHLGFKDCKFLCPNCFRTKRPRLDAILLLLMSLQKLCVRVPEGEALQSLTERAMNWQDRARQLMQQPELEAAKNKLSSFSQKYSEAAAKQRTEKIITSELKRAYKNPELHQRVQEIAPYSGVSQDDHKNEETNITDSSDDSKGYASADDRMGEHAYSLHFPKFDNNEYRLQIPADIKKQIEELLMEGDLLEVYLDETFQLWKLLQASRDPEKEAILIDFDMHSKTAPSKRGRKRRSDEVEMLRKTKVKTEIETKKLKPQKTKENSQGKKEGTRRKGRRRQSTGSEDDDEDSCAATGCLKPSGENVDWVQCDGGCDKWFHMACVGLSAQDICEDEDYICMTCSQNTYGTLNNMDSLSSVSSECSTLTQPSTSKDSVQCKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01480636;
90% Identity
iTF_01409732;
80% Identity
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