Basic Information

Insect: Cylloceria caligata
Gene Symbol: -
Assembly: GCA_963942595.1
Location: OZ012706.1:770515-779437[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.23 46 6.2 5.9 2 23 5 27 4 27 0.95

2 16 2.5 5.1e+02 2.9 1.0 1 10 616 625 616 634 0.86

3 16 0.0031 0.63 12.1 0.1 1 22 672 693 672 693 0.96

4 16 0.083 17 7.6 0.1 1 23 700 723 700 723 0.92

5 16 0.061 12 8.0 2.5 1 23 733 756 733 756 0.95

6 16 0.19 37 6.5 0.1 2 20 788 806 787 808 0.92

7 16 0.61 1.2e+02 4.8 4.4 1 23 815 838 815 838 0.95

8 16 0.3 60 5.8 6.6 1 23 849 872 849 872 0.93

9 16 0.27 53 6.0 0.5 1 23 899 922 899 922 0.91

10 16 0.12 24 7.1 0.9 2 23 932 954 931 954 0.89

11 16 0.11 23 7.2 0.0 2 20 1035 1053 1034 1055 0.93

12 16 0.078 16 7.7 2.2 1 23 1062 1084 1062 1084 0.95

13 16 0.14 28 6.9 1.0 2 23 1094 1116 1093 1116 0.88

14 16 0.0024 0.47 12.4 1.6 2 23 1189 1211 1189 1211 0.94

15 16 0.0021 0.41 12.6 0.3 2 23 1280 1302 1279 1302 0.94

16 16 0.01 2.1 10.4 0.0 1 23 1387 1410 1387 1410 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.23	46	6.2	5.9	2	23	5	27	4	27	0.95
2	16	2.5	5.1e+02	2.9	1.0	1	10	616	625	616	634	0.86
3	16	0.0031	0.63	12.1	0.1	1	22	672	693	672	693	0.96
4	16	0.083	17	7.6	0.1	1	23	700	723	700	723	0.92
5	16	0.061	12	8.0	2.5	1	23	733	756	733	756	0.95
6	16	0.19	37	6.5	0.1	2	20	788	806	787	808	0.92
7	16	0.61	1.2e+02	4.8	4.4	1	23	815	838	815	838	0.95
8	16	0.3	60	5.8	6.6	1	23	849	872	849	872	0.93
9	16	0.27	53	6.0	0.5	1	23	899	922	899	922	0.91
10	16	0.12	24	7.1	0.9	2	23	932	954	931	954	0.89
11	16	0.11	23	7.2	0.0	2	20	1035	1053	1034	1055	0.93
12	16	0.078	16	7.7	2.2	1	23	1062	1084	1062	1084	0.95
13	16	0.14	28	6.9	1.0	2	23	1094	1116	1093	1116	0.88
14	16	0.0024	0.47	12.4	1.6	2	23	1189	1211	1189	1211	0.94
15	16	0.0021	0.41	12.6	0.3	2	23	1280	1302	1279	1302	0.94
16	16	0.01	2.1	10.4	0.0	1	23	1387	1410	1387	1410	0.93

Sequence Information

Coding Sequence: atgttcaaaataaAGTGCCCTGTTTGCAATCAAAGGACTAATCTCGAAGAAAATCTTCGCCGTCACCTATGCCACTGCCATAGCGGATGGGAGAACACAAATCTAAATATATTTGTCACTGAATCCTGTCGGGATAAAACCAAAAGTTTGTCTGCTAATAACAATTCAAAGAGTAGCCGATCCGTCGTGACCAAGAGATCAAGAAAGgcgcgtatgattagattaatAAAATGCCTAGCCATGACAACGTCGAATGACAACAAAGTGACGAACttgattgatgaaaaaaaaaatacaaagtcgGAGAGTTTAAAGAAAACTTTCAAAAAATCTGACTCATCGATTGACGACAAAAACGTACAACCTTATGTTGAAATTTATAGAATTCCGAATGAAATTGAAGCGCTGTTCAGTAATACGTTTAATGTCGGTGTACGCGTAGAAGAGACGAAGAAAAAATCCATCAATGATttacaaaattgtgaaaaatataaagatgtTCGTAATACTCGATCTACCACCAGCAATTCGCAAAACAGATTAAGAGACGGAAATAAATCCGTTTCGAATAGGGTCGCTGAAGCTTTCAACGGTATTGGGAAAAATCCGTGGCCACGGTTGTCCTCAATGTTGGGTTTGATCGCAGCTAGCGAAAAATACCAAGATGCTGCACTGCGGACGTTATACTCCTGCAAAGACTGTTGTGTACCATTGGTGAGAATCAACGCGACAAAAAAGACGCCCAGTGAAGTTGTAACGCGCAAAAATGTAACCGAAGGCTCGACTAAAGAGGAGTGCATAAAAATCTCATTGGAAAAATCCACTTGCCCGGCAGATGATTCcacgatttttcgtgaaatcgggGGACCGGTAAAACAGAACAAACGTTCGGAGCAACAggtgagagagaagaagaagaaccaaTTTAAATTGATCGATGTTGAAGTGCATCTCGAGAAGCTCTCGCACTCGGATGTTTTCTCTAAATCGAAAACCGAAAATCACGGAAATCACGAGCCCTCAAGCGTAAGCGCGGCATCCGAAGAAGGTTCCGATCCACCGAGTTCCTCGCGTACGTCTCAAGTTGATAATTGTGACGTTGATGAACCATCGAAAGAAACGAGCGATACTTTTGCCGAAAGTCCGGTATCGTCAAGCGATACCGGACTCAAAACTGAAGTTGTTAACTGTGACGCTGACGAAATCTCGGAGGTGAGAACAGGAAGGGCACAATGTCACGAATCACTGACCTTTTCGTTTGAAGCTGAACCTATGAATTATCAAGTTGATGGACACTCGACGGTAAGGGCAAATGAAAAATCTTTTGCAGAATGTCCGGAGTTACCAAAGTTTCCGATTAAAAGTGAAATTGTGAATTATGAGTTTGGCGAGCCGTCAAACCAATTGACCGATACGTCTGTGGAATGTACCAACACATTCGACACTATGTGTAAAGTTGATATCGATGATCACACAATTTACGAATGCTCGGACTATAAAATGAAAGACTCTGAAGAAAGTGGAGCGATACTGAATCCAAACGCTGCTCGGTGTGACACAAGTACTTTATCGGAATCTGGACAGAAGGTACATGTTCAACAGAGCCGTACACTGATATCATCGAGAATTTGCAATAACCTCTTTACGAGCCGACGTTCGATGCTTCGACACTGTCGGGACCGGCACTTGACTTGTTTCAACGATACTATTTACTGTACTTGCGGTAAGGAGATGATTGGCCGCAGAGCGCTGGAAAATCATTTTTCTCGACACTGTGACAAAGTCGTTGAAACGACCAGTTTGGCTTCACATACGTGTAGTCCGTGCGAACCGTTGGAAAAGAAATACGTGTGTTCCAAGTGTGGGGAAAAGTTCTGGTTAGAGACGTGTCTGAACGATCATCCGCCTCATTGTGAATCTCCAAAACCTCCAAAACCGGTAAAGCAAAATCGAGTGACGAACAATCTTCACGAAACATACGGGATAATGAATTATCAAGTGGACAACGGACAATACATCTGTCTAGTTTGCGATGTTAAATTCACGTCCGTTGACACACTAGTGCGACACGTACGTACGTTTTCGACAAACGAAAGGCACCCGTGTCCCATTTGTCGGACAGCATTCACCGGAGTGCGTCTCTTGAGGGGTCACGTACAGGCAACCCACGAGCTCAGTTCTACGACTTCGTATACCTTCTTTTGCGATATATGCAATCAAGGATTCACAAAAAGAATTTATAAACGTATTCACATGATGCATATACATTCGAACGAAGCGAGAGCGAGCGCCGTAGGAAATACTGAGAATCACCACTCCGATGGCTTCGCACCTCCTACGGTTATGAAGACGCCCGACAACCAATGCGACGTGTGCAATCTGGTATTTGTTAATCGCAAACGTTTCATGGATCACGTCGATTATTACAAAAGAAGCGAGCTTTTCCACTGCAACATTTGTGGCGAAGGGTTTGTGGGCCAGTTCAGAGCTCATCATCACAGAAAGACGATTCACTGTGGTGGGAAAGTGCCAAATTCGTACGCGCATTACTGCGCTATTTGCAAAGAAGGATTCATGTACAAGACGCATTTGCACGCTCATATGTTTCACGTACACGACGAAGAGTTCAACTGCGTGACTTCGGTGAAGAATCATACCAGGGCAGAGCAAAACAAAAAATCGCCCGATGGTGAATTCGCGTGTAATCGGTGCCCAAAAAAGTTTCAGACAGATTCGATTTTACTCGCTCATCTCTATTCGTACCACTCCGACAGTGGAATGCCGGGCAGAGTCAAGTGTAGTCGTTGCGACGAAGAATTCTCAACGTGGTCGGGTTGGATCTTTCATTTGAAGCATTCTCATATTATTGATCCCAACAACCCGCTGGGGTTTCGCTTTACCGACAATAATAAGTCCTTCAATGACTCTGGAAACAATTTAATATCCGGCGGAATGTTCGGTGGTCCTAGAAATCTTAATTCCGGGAGGACACCTCAACCTCGCGGCCCGGGTCATAATGATCCTCGGATATCAACATCCGGAAATATATTGCCTGGTCGTGAAATTCTACATAGTCTTCTCAATGGCGGTAAAAGTCAAACAAAGTGCACTATTTGCGGCTTTGATTTCCCTGGCACGGGGGGACTAGCGAGGCACAGGGCCATGTTCTTGAACTCCGGTATCTACGTATGCGAATTTTGCGGCAGAAGGTTTAGTTGGCAGACCTTCTACAGAGATCACAAACTTAAACATTTTCGCCGTGACGTACACAACAACTGCTTCTGTCCCGTCTGCGACGAAGGATTTGAAACTATTCAATCTTTGGAAATGCATACAGTCCATCTCCACCAACAATCGCTCGATAGAGTGCAACTTGGCTCGTCGCAAAATTTGTCGCGCAAGCTTCTACAACCAATATCTGAAACTAGTGCCGAATCGGGAGACAAAGCTATCGATTCAACCGAAACCTGCGATTCGCGTATGCCTCGTGCAGAAATCCACGACAACCGTTTCGACAAAAGTGACACGCCAAAGGATATTTTCAACAGTTTGAATGATTATGCAACATGTAGCATCTGTAATATGGTTTTCATAAGCAAAGAAATGTTAAAGATTCATCGAGAGAACTGTCATTCGTTGCACGAAGAAAACGACTCGACGACGCGCGGGACTGAGTGTTTTGCAAACGGACAAGCTAATCAAACCGGCGACCGTTTCTACGTTTCACTCGGTGACAATATAAATTCAAGTACAGTCAACACTATAGGTAGTAGAATACACGAGTGCAACCAAGCTGTGGGTCTGACGAATAATCTTTATCGTTACGATGCCTCATTAAAATGCGATATTTGCGATCTTACCTTTGCCAGCACGGATATGCTAAGTGTCCATCACGAGATTTTGCACAAAATACGAATCAATTTTAATTCCGGGGGCGATAATGTTTATCAAGAACACCCGTCGCAGATAACGACGGTTGAAATTTCACCGGATATACCTCAATTACACGAGTGTACCGAAGTACACTCCCATTCTAGCCACAACCCCTTGTTACAATCAAAGGCGGAAACACCACAGACGATGGACGAAGTTTCGACAAAAATCGTTGGAAATATTCCAAATATGAGCGAAGCGACGTACCACAATCAATTCAACTACTACCAATGTAGAGTCTgtgatattattttcattgacgAAAATCTTTTGACGGTTCACGAAGAGAATGTGCACCGTTTGAAAACTCCTGACGGTAATTCGTCGAGCGGAGGGTCCCATCGGTCTTCGAATATCGTCGGCGAGTCCTCCCAGCCGGATACCGAGCACTCGCCGCTCGAGACGGACAACGGAAATCTTTCCATAACGCAGTTGATTACTCAACGTGGTCAATCCGTCTCCAACATCGAGCCTATATCCGCACATAGATCTCCTCAACAGATTTTCATTTCAGACGATGAAGCTGAAAGCAATAGCGAATCGTCATTAACATCGATGAATCCATCCTCTTCCGCAAACAAGGGAGTCTGCACATCACCGCATGAAATGCGATTTGTAAATTTGCCTCCAGGCAAATACAAAATTGCCAAATTAAAAATGACAAACGGTAACAAGATGTCCAGTGCCAGGGAAACTGTGTACGATCGATGCGCATACGTAGGATGTTACAATGGAAAGTTTATCAATGGACGGCGATTATTTCACTTTCCGTCGGAAACAGATAGAAGGCTCGAAATGTGGATCGAGAGAAGCGGAAATTTTCGCTTAAGAACCTGGGCAGCGACGTCACTGCGAAAAGCCGGACTCTGCGGGGACCACTTTGACGACAAATGTTTCACCAATGTCACCCGAAAGGCTTTGCGACGAAACGTCGTGCCTCGGCACTACACGGAGGACGGAAAGTTTAGGAAAACGAATGTCCAAAGTAACACGGAGAACAACGAGAACAATGAAAATAACAAGAACAACGGCAGGACGAGCGAAGAACGCGAGGATAATCCTTTGAATTGCGAAATACCATTGTCGACTCTCGATGAATCCACAATGGCAGTACAATTTCGAATCAACGGCGTTAGCGACGAAACGTCATTGCAGTCTGGCGAACACGTGGTCGACGAAGCAGACGGAAAAGCCGCGGATGGTAGATCGCCGTCGCCCGTTGTCGAATTCATCGTCGAGGAACTCGACGAAAATTTAATATTCGACGAATTCTGCAAGGCCGAGCATCGTTGTTCTCCGACTTTGGAGTCGTCGGTCGGTGAGTCGATATGCGAGTACGAAGAAAAAGTACAAGTGGAAAACGATGAATCGCGCGGACAATCGTCATCGCCAATGAGGTTGGAggatattaaagattcgatagGACTTTCCGAGACCGGTTTGAGAGTCAATCGATCGGATTCGGATGTTCGGACGTATTACCGTTCGAAAAATCACTGTCGATCGAAGCTGGAGTTGCCATCAGCAGAGTCGGAAACATACACGGACGAGGAGATATTGACAACGGTAGATACGAATCCAACGTTTCGCGCCGGTAGCGTCGCCCGCGAGAACAAAACACACGAGAAGACGTTACTGACGCTTCGGGACGAAAACACGCATCTTCGAAAGACTGTACGAATGTTGAAACAAAAAGTACGTCGCGCGAAAGCTCGAGAAGCGAATTACATGAAAGTTCGCGATATGCTAAAGAACGTGGACGAGTTTCTCAACATACAGGAGTGCACAAATCCCGTGGCTCGAGCGATGGCAAAACTGGCGCTGCACAAGCGCAATGCTTCGTATACGAAGGAAGAGAAGGATTTTGCTATGCAGCTTTATCGGCATTCGAGCACCGCTTTCGTTAGGCTGCGAAGATCCGGCTGCAATTTTCCTGGTCAAAGTACGGTGAAACGCTGGCTCAGCGAGGACCAAGGCCAACTGCCGAGCTGTGATTTTATGACGATGATGGAAGCCGAAGAAAATGAAATGGTCGAGGATATCCATGAAATCGGCGAAAGCACCATGGTCGAGGAGGTCGAGGGAAATGTCGAAGAAATGGAAGAAGCGGTTGAAGATGCGGAAGACGCGATCGACGAGCTCGTGGAACACTTGGCGGAGCAAATCGAAGAAGCCGACGGACACGAGGAATACGTGGAGGAACTTCCACCCGACGAAGACGAGCAAGAGGATTTAAAATAG
Protein Sequence: MFKIKCPVCNQRTNLEENLRRHLCHCHSGWENTNLNIFVTESCRDKTKSLSANNNSKSSRSVVTKRSRKARMIRLIKCLAMTTSNDNKVTNLIDEKKNTKSESLKKTFKKSDSSIDDKNVQPYVEIYRIPNEIEALFSNTFNVGVRVEETKKKSINDLQNCEKYKDVRNTRSTTSNSQNRLRDGNKSVSNRVAEAFNGIGKNPWPRLSSMLGLIAASEKYQDAALRTLYSCKDCCVPLVRINATKKTPSEVVTRKNVTEGSTKEECIKISLEKSTCPADDSTIFREIGGPVKQNKRSEQQVREKKKNQFKLIDVEVHLEKLSHSDVFSKSKTENHGNHEPSSVSAASEEGSDPPSSSRTSQVDNCDVDEPSKETSDTFAESPVSSSDTGLKTEVVNCDADEISEVRTGRAQCHESLTFSFEAEPMNYQVDGHSTVRANEKSFAECPELPKFPIKSEIVNYEFGEPSNQLTDTSVECTNTFDTMCKVDIDDHTIYECSDYKMKDSEESGAILNPNAARCDTSTLSESGQKVHVQQSRTLISSRICNNLFTSRRSMLRHCRDRHLTCFNDTIYCTCGKEMIGRRALENHFSRHCDKVVETTSLASHTCSPCEPLEKKYVCSKCGEKFWLETCLNDHPPHCESPKPPKPVKQNRVTNNLHETYGIMNYQVDNGQYICLVCDVKFTSVDTLVRHVRTFSTNERHPCPICRTAFTGVRLLRGHVQATHELSSTTSYTFFCDICNQGFTKRIYKRIHMMHIHSNEARASAVGNTENHHSDGFAPPTVMKTPDNQCDVCNLVFVNRKRFMDHVDYYKRSELFHCNICGEGFVGQFRAHHHRKTIHCGGKVPNSYAHYCAICKEGFMYKTHLHAHMFHVHDEEFNCVTSVKNHTRAEQNKKSPDGEFACNRCPKKFQTDSILLAHLYSYHSDSGMPGRVKCSRCDEEFSTWSGWIFHLKHSHIIDPNNPLGFRFTDNNKSFNDSGNNLISGGMFGGPRNLNSGRTPQPRGPGHNDPRISTSGNILPGREILHSLLNGGKSQTKCTICGFDFPGTGGLARHRAMFLNSGIYVCEFCGRRFSWQTFYRDHKLKHFRRDVHNNCFCPVCDEGFETIQSLEMHTVHLHQQSLDRVQLGSSQNLSRKLLQPISETSAESGDKAIDSTETCDSRMPRAEIHDNRFDKSDTPKDIFNSLNDYATCSICNMVFISKEMLKIHRENCHSLHEENDSTTRGTECFANGQANQTGDRFYVSLGDNINSSTVNTIGSRIHECNQAVGLTNNLYRYDASLKCDICDLTFASTDMLSVHHEILHKIRINFNSGGDNVYQEHPSQITTVEISPDIPQLHECTEVHSHSSHNPLLQSKAETPQTMDEVSTKIVGNIPNMSEATYHNQFNYYQCRVCDIIFIDENLLTVHEENVHRLKTPDGNSSSGGSHRSSNIVGESSQPDTEHSPLETDNGNLSITQLITQRGQSVSNIEPISAHRSPQQIFISDDEAESNSESSLTSMNPSSSANKGVCTSPHEMRFVNLPPGKYKIAKLKMTNGNKMSSARETVYDRCAYVGCYNGKFINGRRLFHFPSETDRRLEMWIERSGNFRLRTWAATSLRKAGLCGDHFDDKCFTNVTRKALRRNVVPRHYTEDGKFRKTNVQSNTENNENNENNKNNGRTSEEREDNPLNCEIPLSTLDESTMAVQFRINGVSDETSLQSGEHVVDEADGKAADGRSPSPVVEFIVEELDENLIFDEFCKAEHRCSPTLESSVGESICEYEEKVQVENDESRGQSSSPMRLEDIKDSIGLSETGLRVNRSDSDVRTYYRSKNHCRSKLELPSAESETYTDEEILTTVDTNPTFRAGSVARENKTHEKTLLTLRDENTHLRKTVRMLKQKVRRAKAREANYMKVRDMLKNVDEFLNIQECTNPVARAMAKLALHKRNASYTKEEKDFAMQLYRHSSTAFVRLRRSGCNFPGQSTVKRWLSEDQGQLPSCDFMTMMEAEENEMVEDIHEIGESTMVEEVEGNVEEMEEAVEDAEDAIDELVEHLAEQIEEADGHEEYVEELPPDEDEQEDLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -