Basic Information

Insect: Cylloceria caligata
Gene Symbol: -
Assembly: GCA_963942595.1
Location: OZ012703.1:94923004-94927784[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00031 0.063 15.2 0.3 2 23 853 874 852 874 0.97

2 17 1.7 3.5e+02 3.4 0.6 1 19 880 898 880 899 0.83

3 17 0.53 1.1e+02 5.1 0.9 2 23 907 928 906 928 0.95

4 17 0.0016 0.33 12.9 3.1 3 23 937 958 936 958 0.98

5 17 0.0043 0.88 11.6 1.5 1 23 965 988 965 988 0.95

6 17 0.00024 0.048 15.6 1.9 1 23 994 1017 994 1018 0.94

7 17 0.76 1.5e+02 4.5 0.9 2 23 1025 1045 1025 1045 0.94

8 17 8.6e-07 0.00017 23.3 2.4 2 23 1051 1072 1050 1072 0.97

9 17 2.7e-06 0.00054 21.7 0.2 1 23 1078 1100 1078 1100 0.99

10 17 0.0051 1 11.4 2.8 2 23 1112 1134 1111 1134 0.95

11 17 0.3 60 5.8 0.5 1 23 1140 1163 1140 1163 0.94

12 17 0.018 3.5 9.7 1.9 2 23 1194 1216 1193 1216 0.95

13 17 0.0039 0.78 11.8 1.0 2 23 1223 1245 1222 1245 0.96

14 17 0.00054 0.11 14.5 1.3 2 23 1253 1274 1252 1274 0.96

15 17 0.0014 0.29 13.1 2.3 1 23 1280 1303 1280 1303 0.96

16 17 0.39 78 5.5 3.2 2 23 1310 1331 1309 1331 0.96

17 17 0.64 1.3e+02 4.8 1.2 1 23 1337 1359 1337 1359 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00031	0.063	15.2	0.3	2	23	853	874	852	874	0.97
2	17	1.7	3.5e+02	3.4	0.6	1	19	880	898	880	899	0.83
3	17	0.53	1.1e+02	5.1	0.9	2	23	907	928	906	928	0.95
4	17	0.0016	0.33	12.9	3.1	3	23	937	958	936	958	0.98
5	17	0.0043	0.88	11.6	1.5	1	23	965	988	965	988	0.95
6	17	0.00024	0.048	15.6	1.9	1	23	994	1017	994	1018	0.94
7	17	0.76	1.5e+02	4.5	0.9	2	23	1025	1045	1025	1045	0.94
8	17	8.6e-07	0.00017	23.3	2.4	2	23	1051	1072	1050	1072	0.97
9	17	2.7e-06	0.00054	21.7	0.2	1	23	1078	1100	1078	1100	0.99
10	17	0.0051	1	11.4	2.8	2	23	1112	1134	1111	1134	0.95
11	17	0.3	60	5.8	0.5	1	23	1140	1163	1140	1163	0.94
12	17	0.018	3.5	9.7	1.9	2	23	1194	1216	1193	1216	0.95
13	17	0.0039	0.78	11.8	1.0	2	23	1223	1245	1222	1245	0.96
14	17	0.00054	0.11	14.5	1.3	2	23	1253	1274	1252	1274	0.96
15	17	0.0014	0.29	13.1	2.3	1	23	1280	1303	1280	1303	0.96
16	17	0.39	78	5.5	3.2	2	23	1310	1331	1309	1331	0.96
17	17	0.64	1.3e+02	4.8	1.2	1	23	1337	1359	1337	1359	0.92

Sequence Information

Coding Sequence: ATGAGCATTTTGGAGGAAGCTGTATCATTAACCACCGAAAGTGCCGTTGGTACTTTACAAAATTATCATGCCAACGGCAATTTCATTAGCGAACAGTCTCATGCCGCGCTTATACAGGATCTCACCGAAGAGAGCGTCATCGTCCTGGATGACGAACCCTGTGCCGATCGACAGTCGCAGGCACCTCTGACCCAATGTTATGTGCGAGGCCATGCTCGTGATACCAAGTTTGAAGAGTATAGCATCGTCGAGCACAAGGCACAAGTTTTGACTGGAAAAGAAGGTAAAATTCGTCGACGATGGATAAAGGAGGAAAGAGAAGATCACAACTATATCGATTATCAATTCAATATTCCTTTGGCTAATGCCACCGAAAGAAAGATCCTATCgaaggaaaaaaagaaaggcACGGCGATGTATCCACGATTGGAACTTAAATCGGAAAATTGTTTGAACGAAGGTTCCAGAAATCGTATTCAGAACATTAACGATTTGAAGAATGTAACACCAAAAGTAAAATTATTATCTCCAGAGATGACAAATTTGTCTCAATTGACTAGCATAAAGAGCATTCAAAGTTCGAACATGGAgagtagcagcagcggcggcAGCAGAAGCAGAGATACCAGCCTCGAGATCTCTCACCACGAGCTAAAAAATTACTGTCGTACTTGCGCGGGCCTAAAAGTACCGCTTGTCGACATCTTCAGCGAAAAGGGAATGCAGATGCGTCTGTATCAACAGTTGAAGCACTTGGAAGACATAAAGCAAGAGGATTGTCTCTCGACGCAGATGTGTATGGACTGCATCTGTGATTTGAAAATGAGTTACAAGTTTTTCATGCAGATTAAGAAGGCTCAGGTGAAACTGAAGTCGATTCACTCGTCGTCCGAAACGACAATGACAGCGACTGGGATATTATCCGAGGACGAGAGATCGAGAAATTGCGAACCCATCGCCAACAGCCGATCGACTTGTCCCTCAAGAAAATCGGAGAGCGAAAATTCGGATATTTCACTGAGATTAGCCGAAGAAACTCAAGTTGAACTCCCGCTTGAATCCCCGATAAAAGTCGAGTCAGAAACCGAATTCATATTTCAATTGAGCGACAATGAATCGATCGAAGAATTCGATCCCGAGGATCCACCCTTTCAGCCCGACACTTTGGAAGCCGCGGAGACCGAGGCCGACGTCGAGTACCTTCACGAATCTTGGGGAAAGGTAGAAACTCTTTCCGACGGATTGCAGGAGGATGATCATCAGGTTATGGTCGACGAGACGAGTCCTCTCGAGGCAATAAATGATCCGTCGAAATTGGAGAATAGAGAGAGCGGCAACGAGACCAATCAAGATGCTAATAAAACGGTTTATCAGTACGACACGACTCTGAAAGCTTACATAAAAGTCGAGCCACCGCCGCCGACGCCACCACCACCCGATGAGAATAATTTGACGAGTTCGTCGCTGATGATACCAAGATTACCCGAGGCTGCTGATTACGGATCGAATAACGAGGACGTGACGCCGTGTAAGCAGCCTAATATTCTGAAACGAAAAGTTCCAATATCGAAGAATTTTTTAGGGAATCCCGTGGCGAGCGGCAATGTGTCGGATTCGACGTTCGTCAGATCGGGACAGAGGGACATAAAAAAGCCAAAATTAAACGTGGAAAACGCTGTTAACGTACCGAATGAGAAGGAGGAAGGTGTAATGTACGTGACGGTAAAAGGCGCCAAACCAAACGAGTTGCTTCTCgtaaaagtgaaaaaaatggataaatCGGTGGAAAGTAAAAAATCTGAGAAAAAGAAGCAAGTAACGGTGCCAGCAGACGCCGCATCGGTCGACGAGATTCTCAAGAAGATACGAGAGGATCCTCTTGGCACGAGGGACAAAGATTATTTGGCGAAGCGTTCGAAAGCGCTTGACATTCGCGAGCAAATGATCGCTAATCAGATCGAGGAGTACAAGAAgaaacgagaaaaaatattgggcGGTACGGCGGGTTTGCCGAACGCTCTCAAGGTCGACGATGGTACGGTACGGTTTGTCAATCCAGTCGAAACGGTAAAGTCGAGCGAGGATGTTAAAGACGAGCCGAGCGAGGAAGTCCAGGAAGTTCGTCGTGTGGTAAACTTGGGAAATGACAAAGACACCGAAAGCGAGAAGAACGAGTCAGAcaaggaaaagaaaatattgcAAAGACCAGAATCACCGGTTTATTACAATAATGCCGGTGAGTATCTGTCACGACTCGCGAAACTCAAGAGAAAGTGGGACgaagcgaagaagaagaaagagtcGCTTCAGCGAGAGTTGGCTGAATCTTATACGGAGGGTAATCTAGAGAAGCTCGGTCGAATACTCGGCGAGAAAGAGAAGAATCTTCGGGAATTTCAGGATTACCTTAAACAGCGTAAAATCGTAATAACCCGCTTAAAAGATGAGGATATAATATCACTGTACGAGGATCGAAACAACACGACGAAGAAAAAGTTGCCCGATATCATAGATACTACGACGCCTCCGGATTATATAGCTGAGGAGAATTACCTCGAGTGCGACTACTGTCCCGAGACTTTTGCACTTTGCGATCTTCTCGAGGAACACTTGAAAACCCACGATTACAAACTCATGTATTATTGCGAGGATTGCCAGGAGGATTTTCCGAGCGTAAAAACAAAACGCAGTCACAatgtgagttgcattaaaaagtTAATATGTAAATATTGCGATTTGATGTTGGACTCAAAGGGAAAGAAACGGCAACACGAGCAGAAGCACGTTGACGGTATTTACGGTCAGTTGTGCGAGGTTTGTGGGGAAAAGTTCAAACACCATGGAACACTCGATCAGCACTTGAAGACCCAACACATGACGTGGGAAAAAATATACGAGTGTCCAAAATGTCCGAAGAAATTTGCCTTCAAGCAGAAACTGAGCTTTCATCTGAAATCCGTTCACACGAGTCTGCGAGCCTATCTTTGCGAGGATTGTGGAGCGGATTTTAAGAATCCGGCGAGTCTCCGACATCACAGAATCCGTAAGCATCATCCAACGGGAAACAAGCGGGAATGTCCGGTGTGTCACAAACTCGTACCCTTTTACAGTCTATCGAAACACATGTACACCCACAAAGCTTATACGATCCGATGTCCGCACTGCGAGAAGATGTTCAAGAACAGCTCTACGCTCAAGCAACACGTGAGAATTCACGAGGATCAGAGACAGTACAGATGCGACACGTGCGGTGTGGGTTTCAACAGACGCGATGGCCTGAGATTGCATATGCGCGTCCATCAAAAGACCGACAGCCGATCACTCAAAGAATGCTCCTGTCAGATTTGTTCCGAGAAATTTCCCAACCACTCCATGCTGGTTATTCATAGAAATCGGGTTCACAAAGATGGGAGACAGTACACTTGTCTTATTTGCAACAGGTCGATGCTCTCGCCGAGATCCCTCGAGTGGCACATGTCGCATATACACAACGAGACGCTGCCCGATGGAGGAGGTGGTGGCGATGAAGCAGATGCAATCAAGTACGAGATCGAGGGGACCCCGCCGAAAAAGAGAGTTTCTTGCGCTCATTGCGAGAAAACTTTCAAGACCGAGATGATACTGAGAACTCATATTAAAAATACCCATGTCGAGAAAGATCCGACTAAATGTCTCGATTGCGAGCTCACTTTTACTTCCGATGTGAGATTGCGGCACCATATGATGGTCGCCCATAACAGACTAGAAGGCACCTTGCCCTGTCTTCATTGTCCCAAGCGCTTTGTCAATCAGCTTCGTCTCAAGACTCACATGATTTCACACTCCGAGGATAGGCCATACACCTGTGAAATTTGTGGCTTTAATCTTAAAACGAAGATACAGTTGATAAAACATCATCAGAACAGGCACAGCGACGAGAGACCGCTACAGTGTCGATACTGCCCGTGGAGATGCAAACAAGTGAGCGCTCTCGTTTGCCACGAGAGAACTCACACCAATGAAAGACCGTACGCTTGTATCGTATGTCGGCAAAGATTCAAATACCTCGGCGATAAGAACAAGCACGAGAGACGACACGAGAGCTTAGGGGGATCGGGTTTCAAAAGAATCGTCGTTGAAAGAAATTTGAAGCAGCCCAAAACCGTTTATCGTCATCAAGACGTGTCGTCTTCAACCTCTGATCAGGATCCCCTTGATTACGACAATCAGGAGGATGAAGAGCAATTTACCGAGGACCAAgatcagcagcagcaggagcaaATCATCAAATTTGAGGAGTCTGATGAGACTTCTCAAAAGTACGAGCAATCTTACCAACAGGAATACGAAGAAACATCGAGAGAAACCTCGGAAGCTGCAGAGGTCATCATGAACATGGAAGACACGACGGTATATACCGAGGAAGTAACAGCGGAGAATATCGAGACTGCGGAAATTATATCCGACGAGATAATGACGGATCAGATATTACAATCCGGTACTGTCGTTCATCTGCAACAGCAAGACGATACGGGTAAAATTCAGGTGATACCCGTGATGCTCTCCTTGCCGGATCTCAGTGATTCGAGCGCGGAAGTCAATCTGGCCACCGCCTCGATAATGTATAATAACTGA
Protein Sequence: MSILEEAVSLTTESAVGTLQNYHANGNFISEQSHAALIQDLTEESVIVLDDEPCADRQSQAPLTQCYVRGHARDTKFEEYSIVEHKAQVLTGKEGKIRRRWIKEEREDHNYIDYQFNIPLANATERKILSKEKKKGTAMYPRLELKSENCLNEGSRNRIQNINDLKNVTPKVKLLSPEMTNLSQLTSIKSIQSSNMESSSSGGSRSRDTSLEISHHELKNYCRTCAGLKVPLVDIFSEKGMQMRLYQQLKHLEDIKQEDCLSTQMCMDCICDLKMSYKFFMQIKKAQVKLKSIHSSSETTMTATGILSEDERSRNCEPIANSRSTCPSRKSESENSDISLRLAEETQVELPLESPIKVESETEFIFQLSDNESIEEFDPEDPPFQPDTLEAAETEADVEYLHESWGKVETLSDGLQEDDHQVMVDETSPLEAINDPSKLENRESGNETNQDANKTVYQYDTTLKAYIKVEPPPPTPPPPDENNLTSSSLMIPRLPEAADYGSNNEDVTPCKQPNILKRKVPISKNFLGNPVASGNVSDSTFVRSGQRDIKKPKLNVENAVNVPNEKEEGVMYVTVKGAKPNELLLVKVKKMDKSVESKKSEKKKQVTVPADAASVDEILKKIREDPLGTRDKDYLAKRSKALDIREQMIANQIEEYKKKREKILGGTAGLPNALKVDDGTVRFVNPVETVKSSEDVKDEPSEEVQEVRRVVNLGNDKDTESEKNESDKEKKILQRPESPVYYNNAGEYLSRLAKLKRKWDEAKKKKESLQRELAESYTEGNLEKLGRILGEKEKNLREFQDYLKQRKIVITRLKDEDIISLYEDRNNTTKKKLPDIIDTTTPPDYIAEENYLECDYCPETFALCDLLEEHLKTHDYKLMYYCEDCQEDFPSVKTKRSHNVSCIKKLICKYCDLMLDSKGKKRQHEQKHVDGIYGQLCEVCGEKFKHHGTLDQHLKTQHMTWEKIYECPKCPKKFAFKQKLSFHLKSVHTSLRAYLCEDCGADFKNPASLRHHRIRKHHPTGNKRECPVCHKLVPFYSLSKHMYTHKAYTIRCPHCEKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHQKTDSRSLKECSCQICSEKFPNHSMLVIHRNRVHKDGRQYTCLICNRSMLSPRSLEWHMSHIHNETLPDGGGGGDEADAIKYEIEGTPPKKRVSCAHCEKTFKTEMILRTHIKNTHVEKDPTKCLDCELTFTSDVRLRHHMMVAHNRLEGTLPCLHCPKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYACIVCRQRFKYLGDKNKHERRHESLGGSGFKRIVVERNLKQPKTVYRHQDVSSSTSDQDPLDYDNQEDEEQFTEDQDQQQQEQIIKFEESDETSQKYEQSYQQEYEETSRETSEAAEVIMNMEDTTVYTEEVTAENIETAEIISDEIMTDQILQSGTVVHLQQQDDTGKIQVIPVMLSLPDLSDSSAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -