Basic Information

Insect: Cylloceria caligata
Gene Symbol: PZF1
Assembly: GCA_963942595.1
Location: OZ012703.1:7698449-7702363[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3.5 7e+02 2.5 6.4 1 23 440 464 440 464 0.95

2 13 0.017 3.3 9.8 0.5 2 21 501 520 500 521 0.93

3 13 0.00013 0.026 16.4 2.5 1 23 553 576 553 576 0.94

4 13 0.0059 1.2 11.2 0.1 1 23 589 612 589 612 0.94

5 13 0.0039 0.78 11.8 2.3 1 23 638 661 638 661 0.93

6 13 0.0071 1.4 10.9 1.6 1 20 667 686 667 688 0.95

7 13 0.0005 0.1 14.6 2.8 1 23 704 726 704 726 0.97

8 13 3.1e-06 0.00063 21.5 0.9 1 23 769 791 769 791 0.99

9 13 2.9e-07 5.8e-05 24.8 0.2 1 23 797 819 797 819 0.99

10 13 0.037 7.5 8.7 1.0 1 23 825 847 825 847 0.94

11 13 0.0032 0.64 12.0 4.2 1 23 853 875 853 875 0.99

12 13 0.00031 0.063 15.2 0.6 1 23 881 903 881 903 0.99

13 13 2.5e-05 0.0051 18.7 1.5 1 23 909 932 909 932 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3.5	7e+02	2.5	6.4	1	23	440	464	440	464	0.95
2	13	0.017	3.3	9.8	0.5	2	21	501	520	500	521	0.93
3	13	0.00013	0.026	16.4	2.5	1	23	553	576	553	576	0.94
4	13	0.0059	1.2	11.2	0.1	1	23	589	612	589	612	0.94
5	13	0.0039	0.78	11.8	2.3	1	23	638	661	638	661	0.93
6	13	0.0071	1.4	10.9	1.6	1	20	667	686	667	688	0.95
7	13	0.0005	0.1	14.6	2.8	1	23	704	726	704	726	0.97
8	13	3.1e-06	0.00063	21.5	0.9	1	23	769	791	769	791	0.99
9	13	2.9e-07	5.8e-05	24.8	0.2	1	23	797	819	797	819	0.99
10	13	0.037	7.5	8.7	1.0	1	23	825	847	825	847	0.94
11	13	0.0032	0.64	12.0	4.2	1	23	853	875	853	875	0.99
12	13	0.00031	0.063	15.2	0.6	1	23	881	903	881	903	0.99
13	13	2.5e-05	0.0051	18.7	1.5	1	23	909	932	909	932	0.96

Sequence Information

Coding Sequence: ATGCTGACATTGATCCTGCAGACTCAAGAGgggcagaaaatcgaattaaatGTTCAACCAGAAGATACATTCGCAGATTTAAAGAGACAGTATCCCTACAACGATGACCTGTCAGATTCACTCGAAAAAATCATCACCAATGGAGCTAGCGTACcggaaaatacaaaaatatttgactACGTTACTGGCAGCGCGCACGAATGGTTCAGTGCCGATCACAGCTTAGATGTCGATGTCGATCAGTCTTCAACATTGCAGACACGAATCAAAGAATGTTGCGCACAAGGCTGTTTCAATTCTGATCTAACCACACCggataaacaattttttcctTTGCCTACGGACCACGACAGGCTCTCAATGTGCCTAATAGAAGTAGGCAGGCCCGATCTCTACAACCAAATCTCTGAATTGGATGTGGAAAATTGCCAAAAGTATTTTGTGTGCAACAGTCACTACAATCAAGAAGTTTCTTGTTTACCTCCGCTCTGCAATGCAGAACAGTCAGCGGTTTCACTTCTGAAGCCAAAAAATGAAAGATTGTGGACAGATATGAAAGAACAAAGAATATTAAGCGAAGAGGAGCAAAATTATGAACTTCAGGGAGTTGACTTGGAAAGTAAGGGTTCCGtgctcgagctattggacaccATTGAGGATTTCGTGCATCCCGGAATTCTCTGCCGTTTGTGTGGCAAACTTACCACCAGTCCAATTCATCTTTATGCTCGGGAGGAAGAAAACGAGGAGTTCAGTCTTGCTGATAAAATTAATTTGTGCCTTCCCGTTACGGTGACCGTCACGGATCCACTGCCGAAGCAAATTTGCGAAGAATGCCAAGAGAAGCTAAATACTTGTCACGAACTGGCGTTGTCTTGTTTGCAGACGGAAGACAAGCTCAAGCTTCTCTTGCAAGAGAAGAAACTTTGTACCAATGGTACTGCGGAACAACAGTGTCCTCTGTGTCTCGAAGGGAACATGCAGATCGTTAAAAAGAGCGGTATTTATCGAAAAGACAATCTAAAGAATGAATTCCGTTCAGTGAACACAATCGAAGCTGCGAGGTCCACTTCGACCGAGAAAATCATTTCGAACGAAGACTGCAACGAGCTAGCGCTGAGTAGAATAAATTTTCCTCTGTTGGACgattctttttcaaaatcaacgGCAACAAATTCGATAAAAGCTAAACATTCTGAAGGAAATGCTTTGCATCCGCTACCGGACGAAGAATTTTCGTATTCCAATTGTTCGACAAAAATCAACATTGCATCAATCCGTACCCACGAATGTCCTCCGGAAAATCAAGATTTACGTTACAGTTGCTTAATTTGCGAAAGTACACATTTCACGTATTCCCACGAGCTCGAGATGCATTATCGTCATCGCCATGGTCTCCTCGAGGGAAAATTCACATGCGATTTATGTCGCTATGAGTGCGAGGAGCTCGAGGAGGCTGTGGAGCACGTGAAAATGTGTAAACCCGAATCCTGGCAGATTCGTTGCGGGACTTGTGAAAAGACTTTTCCCAACAGCGAGTTGATAAACGATCACCAATGTTATCAAATTTCCTTTGATCTGCACGAGCCTAAAGAGAAATTTCACGTTGAGTCTCCGACGAAACTtccaaaaaaacgaaaaaaacaaccAGTTCAATATAATTGTTTCTTTTGTCAGAAGCAATTTTCGCGAAAGGAAAGTCTCAAAACTCACATATCAGCTTCGCACAAAGAAGAAATGGACAATTCACTATCCTCCAAGTGTTACAAATGCAAGAGTTGTAACGAGGCATTCGCTCGCGAGGCCGACGCTGAGGTGCACATTACGCTCCGTCACCTCGGACCATTCGCAGCTTCCGATTTTTCTGCTAACCAGGAATTCACGCTGGAAGAATTAACAATATCACGTTTATACATTTGCGAATTTTGCGAACGTTGCTTCACGATACCGAGTTCGCTCCACGATCACCGTGAACTGGAGCATGATAGGAGCCTCGAATATTCGTGCCGTTCGTGCAATCGTGTATTCGATTCTCACAGGCAACTGACGAATCACAAGAGCGGACAGTGTAACCAAAGTCCTTTTAATATTCTCGGCGTCAGACAGTTTTACGTTTGCAAATACTGCGACAAAATGTTTCTGCATTATTCAAGTCTCTCGAGTCACATTCTTCAGCATCGGGAGATCGCGCCTTATCTGTGCAGGCCTTGCAATGTCAATTTCGGGACGTACAGGGAAATTGCGGTGCATCGAGACATCGCGCATCCTTATCAATCGACGGTGCACGAGAGAGCAAAACGTTCTTACAAGTGCCAGTACTGTCAGAAGCAGTTTAGTTACGAAGTTGCTCTAGTCAAGCACATCAGAATACACACGGGCGAAAGACCCTACAAATGTTCGATATGTGGCAAGGGATTTGCGCAGAGCTCTGGTCTCAACAGTCATGTGAAAATTCACTCGGACCTGAGACCCTACGCGTGTCCAAAATGTCCGCGGGCATTTAAAATCAAAGGTGATTGTGATAATCACGTCAAGAGGCACTCTGGTAATCGGCCGTACAAATGTGAATTTTGTTCAAAAGCCTTTATGACTCAACACGTCTTTAGTCAGCATCGCAGAATTCATACCAACGACAGACCGTACAAATGCGATGTCTGTGGTGAAGCTTTCCTAAGATCGCACGTCCTCACCGTTCACAGGAGAATTCATACGGGTGAGAAACCGCACGTTTGCGACCTATGCCCCAAAACATATCGTCAGCGAGGTGATCTCTTGAAACACAGAAAGGTTCAGCACGGTATTAACGCAGCTACCGTTACCAGACTCGGTTTCGTCGATAACTGCTCTGAGAATTCTTACGATTCTTTCGCCAAATCGAGCAGTAAACACGTCGACCGTAGAGCCGGTAACTCCGCGCTGCTTCTACCACTTTGA
Protein Sequence: MLTLILQTQEGQKIELNVQPEDTFADLKRQYPYNDDLSDSLEKIITNGASVPENTKIFDYVTGSAHEWFSADHSLDVDVDQSSTLQTRIKECCAQGCFNSDLTTPDKQFFPLPTDHDRLSMCLIEVGRPDLYNQISELDVENCQKYFVCNSHYNQEVSCLPPLCNAEQSAVSLLKPKNERLWTDMKEQRILSEEEQNYELQGVDLESKGSVLELLDTIEDFVHPGILCRLCGKLTTSPIHLYAREEENEEFSLADKINLCLPVTVTVTDPLPKQICEECQEKLNTCHELALSCLQTEDKLKLLLQEKKLCTNGTAEQQCPLCLEGNMQIVKKSGIYRKDNLKNEFRSVNTIEAARSTSTEKIISNEDCNELALSRINFPLLDDSFSKSTATNSIKAKHSEGNALHPLPDEEFSYSNCSTKINIASIRTHECPPENQDLRYSCLICESTHFTYSHELEMHYRHRHGLLEGKFTCDLCRYECEELEEAVEHVKMCKPESWQIRCGTCEKTFPNSELINDHQCYQISFDLHEPKEKFHVESPTKLPKKRKKQPVQYNCFFCQKQFSRKESLKTHISASHKEEMDNSLSSKCYKCKSCNEAFAREADAEVHITLRHLGPFAASDFSANQEFTLEELTISRLYICEFCERCFTIPSSLHDHRELEHDRSLEYSCRSCNRVFDSHRQLTNHKSGQCNQSPFNILGVRQFYVCKYCDKMFLHYSSLSSHILQHREIAPYLCRPCNVNFGTYREIAVHRDIAHPYQSTVHERAKRSYKCQYCQKQFSYEVALVKHIRIHTGERPYKCSICGKGFAQSSGLNSHVKIHSDLRPYACPKCPRAFKIKGDCDNHVKRHSGNRPYKCEFCSKAFMTQHVFSQHRRIHTNDRPYKCDVCGEAFLRSHVLTVHRRIHTGEKPHVCDLCPKTYRQRGDLLKHRKVQHGINAATVTRLGFVDNCSENSYDSFAKSSSKHVDRRAGNSALLLPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -