Basic Information

Insect: Cylloceria caligata
Gene Symbol: -
Assembly: GCA_963942595.1
Location: OZ012704.1:76688685-76693892[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0016 0.32 13.0 0.4 1 23 189 212 189 212 0.95

2 9 4.6e-06 0.00093 21.0 2.3 1 23 217 239 217 239 0.99

3 9 6.5e-07 0.00013 23.6 1.2 1 23 245 267 245 267 0.98

4 9 0.00096 0.19 13.7 0.7 3 23 275 296 273 296 0.93

5 9 1.2e-05 0.0023 19.7 1.0 1 23 302 324 302 324 0.93

6 9 5.4e-06 0.0011 20.8 0.6 1 23 330 352 330 352 0.98

7 9 0.0067 1.4 11.0 5.7 1 23 358 380 358 380 0.96

8 9 9.6e-08 1.9e-05 26.3 0.8 1 23 386 408 386 408 0.98

9 9 0.0023 0.47 12.5 1.3 2 23 417 438 416 438 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0016	0.32	13.0	0.4	1	23	189	212	189	212	0.95
2	9	4.6e-06	0.00093	21.0	2.3	1	23	217	239	217	239	0.99
3	9	6.5e-07	0.00013	23.6	1.2	1	23	245	267	245	267	0.98
4	9	0.00096	0.19	13.7	0.7	3	23	275	296	273	296	0.93
5	9	1.2e-05	0.0023	19.7	1.0	1	23	302	324	302	324	0.93
6	9	5.4e-06	0.0011	20.8	0.6	1	23	330	352	330	352	0.98
7	9	0.0067	1.4	11.0	5.7	1	23	358	380	358	380	0.96
8	9	9.6e-08	1.9e-05	26.3	0.8	1	23	386	408	386	408	0.98
9	9	0.0023	0.47	12.5	1.3	2	23	417	438	416	438	0.96

Sequence Information

Coding Sequence: ATGGAGAACAGACCGGCGCCGCTACGCTCGCGGCGTGTTTGCCGCTTTTGCCTCACTGAAACCGAACCGCTCAACTTCATCTACGAGAGGGATCACAGCAAGCCGTTCCAAGTGCCGCTTACCCTGCAGATTATGTCGTGCGTCGCCATCGAGGTGTACGCAGCAGATGGGATGCCACAGATGATATGCAGCGCGTGTCGCTGGAACTTGGATCGCTCCTACAAGTTCAAGTTGCAGTGCAAGAAGGCTGACGAGGCACTGCGAGCGTACCCGATGACGGGTGTGTTACCCAGGCCATTTCCGCCGATATCTACAGATTTCCCAGAGTCGGGTACGAAGCGAGGGAACGAGCAGAGGATGCAGACCGACCCGGCGAAGAAGCCACGAGTCGACAACGGCGACCGGGAGCGTCAGCGGGATCGCGAACGCCATCAGGAGAAGCAGATCATGAAGACTGACCGCAGCGACCTGTACAAGGAGGAGCAGGAGGGCGACAGCGATGTTGATCAGGACACGGCCAATGAGAAGGAAGACCGAAAATTGGAGCCCGGGGAGATTAGAGTCCACGCGTGTGACCAATGCGATCGAACGTTTCCGCTTCGTCAGGCTCTACAGTTGCACGTTCAGCGAGCTCATCGCGATCGCAATTACAAATGCACCGAGTGCGATCGGATGTTCTTCTCAAAGTACGATCTCGGCAAACACATGACCACTCACTCTTCGGACAAGCCCTTCTCCTGCACGATATGCAACAAGACATTTTCACGTGCGAATCTCCTCCAACGCCATGAAAAAGTCCATCGCGACGACATGCGCTACGGCTGCCAGCACTGCGACCGCGAGTTCTTCACGCCCGAGGAACTCGAGAAGCACGAGGACTCTTCACACAAAACGACCAAGCCTTATCAGTGCAACATCTGTAACAAACGCTTCACTTACAAGCAGGGTCTCGAACGCCATGAGGTACTCCATAACGAGGACAAATCATTTGTTTGCGAATACTGCAAGGAAGCTTTTCGCACGAGCACCAAGCTCGCTCGTCACCTCGCCACTCACTCGGGTCATCGTCCTTATCTGTGCAAACTTTGTCCACGAAAATTCCTTCTCTCGCATCATCTGACTCGTCACATGCGCTCCCACTCTGTTGAGAAGCGACACGTCTGCGAGGACTGTGGAAAAGCCTTCAAACGCAAGGAGAGTCTTGAGGTCCATCAATTGACTCACAGTAAACGCTCGGGAATGGGCCTGACTTGCGACGTCTGCCAGGAGTCGTGTCGCAATCGAGCGGACTACGTGACGCACATAAAGCAACACATCGAGGCCGGTGAAAAGATGGGTCCCGATGGACTACAGCCGGACAAGGACAAGATGGAATCAGAGTccgaggaagaggaagaagaagaagaagtttaCTCCGACGGCGATGATGACTACGAGCCTCCAGCTTACGTAGTCAAGAAACTGCCAAAGGTCAAGACTCAACCGGCCGACAGCGAGGACGAGGAGGAAAGAGACGAACGCATCGAGAAGGAAGATCGTAAAGAGCAGATCGTGTTCGTTCGAGGCAAAGACGGCAACATCGTGAAGAAAACCATCAAAACTCTGATGCCGATTCAGCGTCGAGAAGTCTCGGAGTCTCCGAAGGTCGGTAAACCCAGCGTTCAGCCGTCGAGCGCCAAGAAGCAGCAGCCACGTGAGAACGAGGAGTCGACGACAAAGATTTCACGCGGTGTCGACGACACCGAGGCAGAGGTACAGAAGATCGTTGCGTCGGTTTTCAAAGAACATAAGATACCACTCAAACATACGAACATTCCACAGGAAACTCAAGGAAAGGATACCGCGTCGTCCACGACACCGGCTAATCAGGTTCACACGAGGGCTCAGAGCGCAGCGGCCTCGTCGTCCCAGAAGGAAGAGAAGATCGTGGAGAACGTGACGTCAGGCACACCGCAAACGAAATCCGTCAACACGGTCAAGGTAATAAAGCGTATCGTGGTGAGAAAACCACTAGGTAGCGGCGCGATTGAAAGTACGACGGTCACGACGTCCGCGGGTAAAGATGGAGACGGCGTAACGCCGAGCCCCTCGGGCTCCGGCACCAAAGTCACTAAACGCGTTATCGTTAGACGAATTATTCGTCAAGGCGGTACTACTAGCGAAGTTATTATGAATCCCGATGGTACGATAATCGATCCCGCCGAATTAGCTAATTTGCCGACAGGCAACGTCGTCAAAAGAGTCCTCATCAAGAAAGCTTTGGATCATAAAAATTCGTGCAACGTTGTGCAACAACTGCTGAAACCAGCCGCGGACGCGAGACTCACCggcgcgacgacgacgacaacaacgacgacaacgacgatgacgacgacgccgACTCACGCGAAACCTAGCGATTCTCTTCTGGACGAGGGTCCGAAATTTGAACTTAAAACTTCGCAAGCTTCGAGCACGCCGGAGAAAGCGGTCATCGTGGCGAGTGCGAAGGTCGAACCTAAAAAATCGATACTAGGGTCTAAAGGCGATCAGGAGACGAAAGAGAAGCTAGAGCAGCTGGAGAAACGCGTGGAGCAGCAGCGCATCAAGATCGAGGAACTACAAGCGCGAAAGCAGCAGGAGACCGAAGCTATCGACGAATCACTGCCAGAGCGACACGATGAGTCCGAGGACGAACAGCAATTGCCTCTCAAGCGCGTTTTCGTCAAGAGAAAGCAGAGCATTTATGACGAGGAGCAGGAGTACTCGGAGAGCGATGGAAAGGAGTTAAGCGTGAAGAAGGAGTTTGAGAGTCAAACGGAGGAAATCCCTGAGCCCGAAACTCAAAGCGAGGTGATGGCTGTACTCGAAGCTCCGGTTACGCGAAGCAAACAATTAGCTATAACGAGTTCGAAGGTTTACACGAataagaaggtgattttcgtgAAAACCGAGGATCCCTCCGAGGTCGAAGAGATGAGTCGAGAGATCAGCAGCATTCTCAATTCGGCGGACACCGTTGTGAAGATGCAGGAAAACGTGTTGACGAATCTCAGCCAAATATCCGGAATAGCCGACAACGAGGAGAAAGAGAGCGAGGAAGTGGAAGCTCCAGCCACGATCACCGCTATACCCGAGCCGATGGAACAGGATGAGAGCACCGAtgaagccaaaatcgatgaTGACCTCAAGGAACAGGAAACCGTCGACAGCAGTGGCATCATCGACATAGCCGTCGCCGTTGCCGAGCAGGAGATTACTACTCAGGTGGATCAGGAGGAGAATACGAGCCTTACGCTGGTACAGCAAGATATGTCCGCTTCAGATATATTCGAGGGTTCGGATTCGCCGTTAATGTGCCCAAAACCTGATCGTAGTCTCAACGAATCCGTAATCGAACTATCGCGCAACGACACGATAAATTTGAACGACACCAATGAGAGTCAGGACAGTCTCGAGGATAAACTTTCGCAGATGGAGGGCTAA
Protein Sequence: MENRPAPLRSRRVCRFCLTETEPLNFIYERDHSKPFQVPLTLQIMSCVAIEVYAADGMPQMICSACRWNLDRSYKFKLQCKKADEALRAYPMTGVLPRPFPPISTDFPESGTKRGNEQRMQTDPAKKPRVDNGDRERQRDRERHQEKQIMKTDRSDLYKEEQEGDSDVDQDTANEKEDRKLEPGEIRVHACDQCDRTFPLRQALQLHVQRAHRDRNYKCTECDRMFFSKYDLGKHMTTHSSDKPFSCTICNKTFSRANLLQRHEKVHRDDMRYGCQHCDREFFTPEELEKHEDSSHKTTKPYQCNICNKRFTYKQGLERHEVLHNEDKSFVCEYCKEAFRTSTKLARHLATHSGHRPYLCKLCPRKFLLSHHLTRHMRSHSVEKRHVCEDCGKAFKRKESLEVHQLTHSKRSGMGLTCDVCQESCRNRADYVTHIKQHIEAGEKMGPDGLQPDKDKMESESEEEEEEEEVYSDGDDDYEPPAYVVKKLPKVKTQPADSEDEEERDERIEKEDRKEQIVFVRGKDGNIVKKTIKTLMPIQRREVSESPKVGKPSVQPSSAKKQQPRENEESTTKISRGVDDTEAEVQKIVASVFKEHKIPLKHTNIPQETQGKDTASSTTPANQVHTRAQSAAASSSQKEEKIVENVTSGTPQTKSVNTVKVIKRIVVRKPLGSGAIESTTVTTSAGKDGDGVTPSPSGSGTKVTKRVIVRRIIRQGGTTSEVIMNPDGTIIDPAELANLPTGNVVKRVLIKKALDHKNSCNVVQQLLKPAADARLTGATTTTTTTTTTMTTTPTHAKPSDSLLDEGPKFELKTSQASSTPEKAVIVASAKVEPKKSILGSKGDQETKEKLEQLEKRVEQQRIKIEELQARKQQETEAIDESLPERHDESEDEQQLPLKRVFVKRKQSIYDEEQEYSESDGKELSVKKEFESQTEEIPEPETQSEVMAVLEAPVTRSKQLAITSSKVYTNKKVIFVKTEDPSEVEEMSREISSILNSADTVVKMQENVLTNLSQISGIADNEEKESEEVEAPATITAIPEPMEQDESTDEAKIDDDLKEQETVDSSGIIDIAVAVAEQEITTQVDQEENTSLTLVQQDMSASDIFEGSDSPLMCPKPDRSLNESVIELSRNDTINLNDTNESQDSLEDKLSQMEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00343367;
90% Identity: -
80% Identity: -