Ccal038615.1
Basic Information
- Insect
- Cylloceria caligata
- Gene Symbol
- ZFY
- Assembly
- GCA_963942595.1
- Location
- OZ012709.1:7171625-7177658[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.46 92 5.3 4.9 1 23 325 347 325 347 0.97 2 20 0.012 2.4 10.2 0.5 1 23 396 418 396 418 0.98 3 20 0.0029 0.58 12.2 1.0 1 20 481 500 481 502 0.94 4 20 0.25 50 6.1 0.4 1 23 514 537 514 537 0.93 5 20 0.057 12 8.1 1.4 3 23 544 564 542 564 0.96 6 20 0.43 86 5.3 0.1 3 23 613 634 611 634 0.84 7 20 9.2e-05 0.018 16.9 0.0 1 23 640 662 640 662 0.96 8 20 5e-07 0.0001 24.0 1.0 2 23 700 722 699 722 0.97 9 20 0.0087 1.8 10.7 0.3 1 23 728 751 728 751 0.93 10 20 0.0012 0.23 13.4 0.5 2 23 759 781 758 781 0.95 11 20 0.00013 0.027 16.4 0.7 3 23 791 811 789 811 0.92 12 20 0.0093 1.9 10.6 0.1 2 20 886 904 885 904 0.95 13 20 0.5 1e+02 5.1 0.0 2 23 924 945 923 945 0.96 14 20 6.1e-06 0.0012 20.6 0.8 2 23 962 983 961 983 0.97 15 20 9e-06 0.0018 20.0 2.8 1 23 1006 1029 1006 1029 0.97 16 20 0.52 1e+02 5.1 0.2 2 23 1090 1112 1089 1112 0.94 17 20 0.031 6.2 8.9 2.3 2 23 1144 1166 1142 1166 0.90 18 20 1.7 3.3e+02 3.5 1.8 1 23 1170 1194 1170 1194 0.96 19 20 3.5 7.1e+02 2.5 0.1 1 23 1199 1222 1199 1222 0.89 20 20 0.078 16 7.7 0.4 2 23 1253 1275 1253 1275 0.96
Sequence Information
- Coding Sequence
- ATGGATGATGTTCTGGACGTTCGAAATCCCGATAACGTGTGTAGATTGTGCCTTTCCGCGGATGAACCAATATCATCAGTGTTCGCCGAGCAAACGTCCGCGGTCTCGTTAGCCACGAAAATTCGAGCTTCCTTGTCAATTGAGATTCAAACCAGTGACAAATTATCAACATTAATATGCACCGATTGTCTGAAGAGGGTCAACGAATGGCATACTTATAAGGAAAGTTGTTTGCGCTCTCAGGAGAAGCTCCAAAGATGCTTAGGGGAACGGCTCGAAACTATTCCAAATATCAAGTTGGAACCGATGGACGTAGAAGATCCGCTCGACACATTTGAGACAGTTCCGTTAACATCTGACGAGGAATGGGAGGATCTACCCGATCTTCCCGTAAATTCGTGCGTCTTGAATATGAGCGCCGAAGCACCCAGGAACGGAGAACTTAAGGAGACctctacaataaaaaaagaGCTAATGGAGGATGAAGAAAACAATGCCAATGCCGAAATCGAGTCCATCTGCAGTCGGGAACTTCTGCTGAATCCCATGGCGGTAGGAGGCAACAAAGAGGACAGAATAATGGAAGCCGACTCGACGCAAAAGTTATTCAAAGCCAACaatatgcgaggagctaagaaaAAAGGTCGACGCGGTCCCACCACTCACTACAGAGGCATGCGAAGATATAAAAAACGTTGCTCCTTCTGCCAGATATATTTGCACTCGAAGCACACTTACGCGAAGCATATGGAGCGATTTCATAGCGGCACAGCGCCGGAAAGGATTGCGAAAGAAAAACGAAGGATTCCCGAGAGTGATCTCGCGAGTCAAGAGAACGAAGCTGCGTTCGAGGATGACGCAGAAGGCGAGACGGAAGAAATGATCGAGGATGTGGAGGACGAACTGGTAAGTCTCGAGAAAGACGCTCCTCTCACGCCGGTCCAGCAAAACATAATAAGCCAATTGAAAACCTTCTCCTGCTACTCCTGCAAAGAGTGCTTTCAGGATCGTCGCAGCACTCTCAATCACATACGCCAACATATGCCGGACCTCAGACCTTACACGTGTATCGCATGTCTCACCGAATTCGCCGATCGTTCGATTTACAAGCTGCATTGCGGTGCCTCGTTTCAGTGCGCTATGAAAATCGCCCTGGTCGTGCCGGAACACGGCACGGAGAAGTACTTTACATGCAACATGTGTCTGAGACCATTGGCCAATCGAAAAGAGCTTCTCAGCCATTTGTCGAAGCACTCCGACAAACAATACGAGCAATTGCTCGCTGGACCCTTCCGCTCGCCACCTAAACTCAAACCAATGGCGCCTTTTTCTTCCTCGCCGAACAGACATGGAAGCAACATCGATTTCACAACGACGAGCTCGACCCCCGCCAACACCAAGACCCGGGCTCCGTACAAAAACGGTGATCCCGCGCACAATCATACTTGCACTTACTGCGGCATGATCTACAGATACAAGCAAAATATGTTTAAGCACGTGGAATTGTGCAAAAAATTGCCGAAGGAGAATCGCCAAAGTTACCGATGCGGTCGTTGCGGCATGACTTTCCTCACTGTCAATAGGTTATATTCGCATCTGAATGTCGAGCACAAGACGCGAAAAATCGCATGTTTTCACTGCAATGCCACGTTTAAAGAGCTCAACGAATATTCGGAACATTATCGGCAACATCAGGTAAACGACACGCGATCGACCGTCTTGCCAAGCAACCGCGACAAGGAACGCTCTGGCAAAGTGAAATCTTGGAGTGGCGGCTCTCAAGCATATCAAGTTGACACAACCCAATCGAACATCAAGAGCAGCGCCATCATCAGCTGTGCCCTATGTCCCGGAAGCACTTTTTCCTCGAGAAATGATCTTGCGGAGCACAGGAAAGTTCATCTCAAGCTCAAAATTTATTCCTGCGCGATTTGTCGACGAATGTTCGGCAGAGCCTCGGCTCTCGAAGCTCATATGGCGGATCACGAGCTAGAGATACCATCGAGCGATCTCGATGGCAATAACTCAATTCCTCTCGCCGAACGTGACGAACCGATAAACGTTTCGGTAATTTCTGATCCTGGGACCAGTAGCACCGAATGCCACAGCTGTGGCAAAGTATTCGCCAATTATCCGAATCTTAGACGCCATATACGCACGGTGCACGATACTATCGGGCGGTACAGCTGTTTTACATGCGCGAAAACGTTCAAGAACGAGGATCAATGGGCTGATCACGTGGAGAATGAACACAAGGATATGGAGCCCGCGATAACTTGCCCTCAGTGCCCCGAGAAGTTTCAGTCTAATCATGCCCTCGAGGATCATCGACAAAACGTTCACGGCATTAACGGCGAGGATCATCTCGCGTGCTATATATGTGGCAAGAAATTCGCCAACGAGTCATCGCTGAGAATTCATCGGGGTCATCACTTCCGCGTAAATTCAAGGTTGAGCATCGGGAATCGTCAACAAGCACAGCCCAATCAGCAGAAGCAACGAGTCATTAGCTCTGTGTCGACGGGACAAGGATCGATCGCGAGTCAGGGAAACACCGACGATGAAATCGTCGTGAGCCCGTCGTCAGTTAAATCTCCAAGAGCAAGAAAATCTTTTCCGAATTCAAGTTCAATTAAACAATTGCAGAACATACTGCAGTGTCAGGTATGCGACGATCGGTTCGCTGACGTATCGAATCTTCGAAAACATCTCTGGGACGTTCATTGCGCGCGCAacaaacccgaaaaaacgttttCCACTGAAAAGCTTCAGTGTGAATTGTGCACGAACGTTATGCCCGATGAGGAAAGTCTCGCGATTCACATGAAGTGGCACGAGGCTAATCCGATATTGAGCAACGGCGAAAAACCCGAAAATCCCGTAGAGTGCGACTTGTGCGGTAAATTCTACAGCTCCAAGGGTAATCTATGGAAGCATAAGAAGCGACACAAAGCGAGAAACGCAGCGGCATTGAAATTGCAGTCCATGCCCAAGAAAAATTGGGGAGGCAACGGTTTTACGTGTAACGTGTGTCGCAAGGTGTTCGCGACGAGGTCTACCCTCAAGAAGCACAAAACGACGTCTCACTCGCAGTCTCAGCATCGCGCGCAGTCCAATCACAGCTCGACGAAGCGACTTCTAGCCGGTAACCCACGGGAGCCTCAACTCATCAAACCTATGCGACCGAAACTCGATTTTGACACGCTCATCGATCACGCCAATTTCTCATCATCGGAATTATCCAACAGCAACGCTAAGAAGCCTGTGACCTGTACTCTCTGCAGAAGAATCGTACCCAGCATGCGAGCACTTTACCGACATCGGCAGCTCGTTCACAAGATAATGATCGGTAAAACAACGTCCAAACCCGAGCTAGAGATGCTGTCATCGATGCACAAAGAGAACGGAAACGAATTGTCTTCGAAATGTCCCTGCACAGCTTGTCCAAAACTCTTCTCAAATCTTTCGAACATGAGACAGCACTTTACAAAAGTTCACGGCTCTGACTTTCAATGCTGCATCGATGGTTGCAAACTCGGCTTTAAGACCCTTCTTGCTAaacaaaatcatgaaaaaactcACATTAACGTAATGTACACGTGTGCTCTGTGTCCTCGTTACATGCTCAGTCGGTCTGGCATGACCGAGCACATGCTCACTGCTCACAAGACAAACTATACAGCGGGCAACAGTAAAATGACGCTCTGTAAAAAAATCAATCTCGACAATTACACGGTCAAGGGAGCAACCGGACGTCAATGTCCATTATGTAAAATCAACTATCCCAATTTCAAATCAATGAAGATACACTACCTTAAGGTACACGAGGGTGCAGCTTGA
- Protein Sequence
- MDDVLDVRNPDNVCRLCLSADEPISSVFAEQTSAVSLATKIRASLSIEIQTSDKLSTLICTDCLKRVNEWHTYKESCLRSQEKLQRCLGERLETIPNIKLEPMDVEDPLDTFETVPLTSDEEWEDLPDLPVNSCVLNMSAEAPRNGELKETSTIKKELMEDEENNANAEIESICSRELLLNPMAVGGNKEDRIMEADSTQKLFKANNMRGAKKKGRRGPTTHYRGMRRYKKRCSFCQIYLHSKHTYAKHMERFHSGTAPERIAKEKRRIPESDLASQENEAAFEDDAEGETEEMIEDVEDELVSLEKDAPLTPVQQNIISQLKTFSCYSCKECFQDRRSTLNHIRQHMPDLRPYTCIACLTEFADRSIYKLHCGASFQCAMKIALVVPEHGTEKYFTCNMCLRPLANRKELLSHLSKHSDKQYEQLLAGPFRSPPKLKPMAPFSSSPNRHGSNIDFTTTSSTPANTKTRAPYKNGDPAHNHTCTYCGMIYRYKQNMFKHVELCKKLPKENRQSYRCGRCGMTFLTVNRLYSHLNVEHKTRKIACFHCNATFKELNEYSEHYRQHQVNDTRSTVLPSNRDKERSGKVKSWSGGSQAYQVDTTQSNIKSSAIISCALCPGSTFSSRNDLAEHRKVHLKLKIYSCAICRRMFGRASALEAHMADHELEIPSSDLDGNNSIPLAERDEPINVSVISDPGTSSTECHSCGKVFANYPNLRRHIRTVHDTIGRYSCFTCAKTFKNEDQWADHVENEHKDMEPAITCPQCPEKFQSNHALEDHRQNVHGINGEDHLACYICGKKFANESSLRIHRGHHFRVNSRLSIGNRQQAQPNQQKQRVISSVSTGQGSIASQGNTDDEIVVSPSSVKSPRARKSFPNSSSIKQLQNILQCQVCDDRFADVSNLRKHLWDVHCARNKPEKTFSTEKLQCELCTNVMPDEESLAIHMKWHEANPILSNGEKPENPVECDLCGKFYSSKGNLWKHKKRHKARNAAALKLQSMPKKNWGGNGFTCNVCRKVFATRSTLKKHKTTSHSQSQHRAQSNHSSTKRLLAGNPREPQLIKPMRPKLDFDTLIDHANFSSSELSNSNAKKPVTCTLCRRIVPSMRALYRHRQLVHKIMIGKTTSKPELEMLSSMHKENGNELSSKCPCTACPKLFSNLSNMRQHFTKVHGSDFQCCIDGCKLGFKTLLAKQNHEKTHINVMYTCALCPRYMLSRSGMTEHMLTAHKTNYTAGNSKMTLCKKINLDNYTVKGATGRQCPLCKINYPNFKSMKIHYLKVHEGAA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -