Ccal033556.1
Basic Information
- Insect
- Cylloceria caligata
- Gene Symbol
- retn
- Assembly
- GCA_963942595.1
- Location
- OZ012707.1:60156255-60156694[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.6e-15 4.4e-11 44.5 0.0 16 79 60 121 50 122 0.90
Sequence Information
- Coding Sequence
- ATGTCTTTCGCTCGCGAGGAAGAAGGAGCGACAAAAACGACCACTTTTAGACAACGGTATCTCACAGCTTTCCGCAAAACGTCTTGTTTTCACGTTTCAACACTCTGgTCTGTTAAATTTCCGCCGTTCAAGTATATTCCCGTCGCTTATGCTAATCGTGGTACGTATTATTTGCTTACAGGAAAGCCGATCAATCGTCTACCAATAATGGCAAAATCGGTACTGGATCTCTACGAGCTCTACAATTTGGTAATAGCCCGGGGCGGTCTCGTCGACGTAATAAACAAGAAACTCTGGCAGGAAATCATCAAGGGCCTCCACCTGCCGTCTAGTATCACATCCGCCGCCTTCACGCTGCGCACCCAGTAA
- Protein Sequence
- MSFAREEEGATKTTTFRQRYLTAFRKTSCFHVSTLWSVKFPPFKYIPVAYANRGTYYLLTGKPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -