Cfor011392.1
Basic Information
- Insect
- Cylas formicarius
- Gene Symbol
- nfxl1
- Assembly
- GCA_029955315.1
- Location
- JARGXY010000006.1:16519062-16525722[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.1 2.4e+03 -1.0 0.4 2 6 106 110 106 111 0.91 2 17 1 2.3e+04 -7.8 5.6 15 19 168 172 167 172 0.81 3 17 0.11 2.5e+03 -1.0 0.4 4 10 203 209 202 212 0.86 4 17 1.5e-08 0.00035 20.9 17.0 1 19 217 234 217 234 0.99 5 17 2.2e-09 5e-05 23.6 16.1 1 19 270 288 270 288 0.98 6 17 3.6e-09 8.3e-05 22.9 12.7 1 18 323 340 323 341 0.98 7 17 0.54 1.3e+04 -3.3 1.4 5 10 365 370 365 370 0.93 8 17 1.1e-05 0.24 11.8 8.7 1 18 376 393 376 394 0.96 9 17 2.8e-05 0.64 10.4 17.1 1 18 428 445 428 446 0.94 10 17 1.4e-10 3.2e-06 27.4 10.6 1 19 455 473 455 473 0.98 11 17 0.36 8.2e+03 -2.7 0.8 5 10 501 506 501 506 0.93 12 17 0.00036 8.4 6.9 4.2 10 19 522 531 519 531 0.90 13 17 0.9 2.1e+04 -4.0 5.4 3 12 542 551 540 551 0.77 14 17 0.00019 4.4 7.8 2.4 1 11 620 630 620 631 0.96 15 17 0.22 5.1e+03 -2.0 1.2 5 10 648 653 648 653 0.92 16 17 2.1e-06 0.048 14.1 16.9 3 19 662 678 661 678 0.94 17 17 1e-06 0.024 15.0 11.4 1 18 721 740 721 741 0.90
Sequence Information
- Coding Sequence
- ATGAACTCCAGATCAAAGTCTAATCCATGGATTAAAAATAACTCCTCACAAAGCAacagaaaaattccaaaaaatgtgTTTGATCCAGGTCCCAAACCATTATTAAAAGCTTcagaaagaaaatttaaggaaGCACATCAGAAATTTCAAGATTCTGTGCAAAAGCATTTAAAGGACTATGACTCTTCTTCAGAAGAGGAATATGTAGACCCCACAGATGTTATTGatgtgattttaaaaaattataggcAAGGAAGAGGAAGCAATGATCaagtaaccaaaactgaaaCATTTATTGAAGAGGCATTTTTATCAGGAACACACACTTGTTTGATTTGCATCTCTAGAATTAAACGAGATGATGAaATATGGAGTTGTTCCAATTGTTATGGCTCATTTCACTTGTTATGCATCCAGAGATGGTCAAAAGATACCATAACTCAACAAAAGCAATCATTAGAAGAGCAATCGTTTTCCCACAGAAAGCCTCTGTCTTGGTGTTGTCCGAAATGTCGATTTGAATATGAACCAGAGAATATTCCATCACAATATTTATGCTTTTGCGGAAAAATCCAGAAACCAAAGTATGATCCATTTTTAATTCCTCATTCATGCGGGGCAATTTGCAAGAAAGGTTTGGTCCCCACTTGTGGACATAAATGTCTGTTGCTTTGTCATCCAGGGCCCTGTCCCCCATGCCCAGTAACTGTCAGTGTCTCTTGCTTTTGTGGCTCCCAACCACCAGTGACCCAACGTTGTAGTCACAAAGGTTGGTCCTGTGGTAATCGATGCGATAAAACGTTGTCATGCGGCAAACACAACTGCCCTGAGCTATGTCACCCAGGCGAGTGTAAACCTTGTTCGAAAAAAAGCATTCAGAAATGCATGTGTCAGTCACAGCAGAAGCTAAGAGATTGCGCATCACCTGTCTGGCAATGTGACAAGATCTGTGGTAAACTATTGGACTGTGGTAATCACAGGTGCCAAGAAGTTTGCCATGGGGGGGTGTGCGAATCTTGTGCTCTGAGCAAACCTAGAACCTGCCCCTgtggaaaagaaaaatatatattgccgTGCACTGACGAAACACCCACTTGCAAAGACACGTGTGGTAAATTGTTGGAATGCGGCATTCATTTTTGTAACCAAAGGTGTCACAAAGAAAAATGTGGATTGTGTTTGGAGACGGTTATAAAAGCTTGCAGATGCGGTCAGTACTCCAAAGAGATACAGTGCAGCAAGCAGTACTTGTGTGATACAAAGTGCAAGAGGATAAGGGATTGTAATAAACATCCGTGCAATAGAAAATGCTGTGACGGTAATTGCCCGCCATGCGAAAAAGTTTGCGGGCACACTTTGCAGTGTGGGAATCACAAGTGCGCCTCGGTTTGTCACCGGGGCCTATGCTATCCGTGTCAGCAAACCAACATAGTGACTTGCAGATGTGGTGCTACGAAAATCACGGTGCCTTGTGgcaaaaaacacaaaaccaAACCTCCAAGATGTTCGAAATTGTGCCTAATTCCACCGGATTGTCACCACGAAACTCGGGAAAGCCACAGGTGTCATTTCGGCGATTGTCCCGCTTGTAAGCAAGTATGTAATAAACGAAGGAGTACCTGCGAGCATCTCTGTTTAGCACAGTGTCATTCTGCAGTGCTAGTCAAGTTGGAAACTGAGAGAGCTTCGATGCCTTGGGAACAAAGTAAACCACAATTGGAAAAGCGAGAACTGCAGTGTCCGGACTGTATTGTTCCGGTTATGGTGACATGTTTAGGAGAACATGAAACATCCAGCTGGCCATGCCATTTGGCGAAACCCTCTTGTTGCGGTCGTCCCTGTGGCAGAATGTTAGCGTGCAGTAACCACTTCTGCTCGGTACCTTGTCACGTTGTCGACAGTGTTGAAGACAACAAAGTTAAGGCAGGAACCAATTGTGAAAAGTGCGAAAATCCTTGTATGAAAGCTAGACCTGACGGATGTCAGCATAGCTGCCTTAACCCGTGTCATCCGGGCGAGTGCCCTCCTTGCAAGCAAATGCTCAGGATCAAATGCCACTGCGGCCTAAACCAGCCTTATATCAAGTGCAGCGATTGGCTGGATTTGGTTAAAAGGGAGGAGTTGCAGAGTTGCGGCAATCAGTGTCCTAAAAATTACGCTTGCGGTCACCGGTGCAAAGCAAACTGTCATTCCGGCAAATGTCCCAATTCCGACTCGTGTAAGAAGAAGCTGAAAGTAACTTGTAAGTGCAAGAGGATAAAGAAGGAATTTTCATGCGAGAGCGTGCGCAGAGGTGTCGCCACAATCGACTGCGACGACGGATGCgcgcaaaaacaaaaagaagaacAGCAAAAGCAGGACGAGTTAGATAAAGTGCGGAAACTGCAAGAAGAGATTAAGAACCAAAGGGAATTAGAGAAGTACGAGAAGATCTTTGCTGGCAAGAGGAAAACGAAGGAGAGGAAGAAACACGAGGAAAATGAAGAGAAGACGCTTTTTCGAAAATACTGGATGCTGGTTTTGTCGAGTTTTTTGGTTGTTGCGTCAGTGGCTGTTTATCAGGTTGTTGGCTAG
- Protein Sequence
- MNSRSKSNPWIKNNSSQSNRKIPKNVFDPGPKPLLKASERKFKEAHQKFQDSVQKHLKDYDSSSEEEYVDPTDVIDVILKNYRQGRGSNDQVTKTETFIEEAFLSGTHTCLICISRIKRDDEIWSCSNCYGSFHLLCIQRWSKDTITQQKQSLEEQSFSHRKPLSWCCPKCRFEYEPENIPSQYLCFCGKIQKPKYDPFLIPHSCGAICKKGLVPTCGHKCLLLCHPGPCPPCPVTVSVSCFCGSQPPVTQRCSHKGWSCGNRCDKTLSCGKHNCPELCHPGECKPCSKKSIQKCMCQSQQKLRDCASPVWQCDKICGKLLDCGNHRCQEVCHGGVCESCALSKPRTCPCGKEKYILPCTDETPTCKDTCGKLLECGIHFCNQRCHKEKCGLCLETVIKACRCGQYSKEIQCSKQYLCDTKCKRIRDCNKHPCNRKCCDGNCPPCEKVCGHTLQCGNHKCASVCHRGLCYPCQQTNIVTCRCGATKITVPCGKKHKTKPPRCSKLCLIPPDCHHETRESHRCHFGDCPACKQVCNKRRSTCEHLCLAQCHSAVLVKLETERASMPWEQSKPQLEKRELQCPDCIVPVMVTCLGEHETSSWPCHLAKPSCCGRPCGRMLACSNHFCSVPCHVVDSVEDNKVKAGTNCEKCENPCMKARPDGCQHSCLNPCHPGECPPCKQMLRIKCHCGLNQPYIKCSDWLDLVKREELQSCGNQCPKNYACGHRCKANCHSGKCPNSDSCKKKLKVTCKCKRIKKEFSCESVRRGVATIDCDDGCAQKQKEEQQKQDELDKVRKLQEEIKNQRELEKYEKIFAGKRKTKERKKHEENEEKTLFRKYWMLVLSSFLVVASVAVYQVVG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -