Cfor007458.1
Basic Information
- Insect
- Cylas formicarius
- Gene Symbol
- pnr
- Assembly
- GCA_029955315.1
- Location
- JARGXY010000004.1:17102058-17114626[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-17 3.5e-14 52.5 2.3 1 35 322 355 322 356 0.97 2 2 2.1e-18 7.1e-15 54.7 6.1 1 35 378 411 378 412 0.98
Sequence Information
- Coding Sequence
- ATGGCAAACAAAGATGAAGCGCTTTCACCGCAAAAAGAGGTAACGCTGAAACAAGAAGAGGATGGTAAAGTGCCAAAAATTGAATCCGGTCAATCGTCTCCAGAACAGAAACAAAATCAGCAATCAGTCAGCGCACCTCCAACTGTTATCAGGAGGAACATTCTTACATCTGCGGGTACTATAGAGGCAGCAGAAGATCAGCTCGAAGTTACTAACGAAGTAGTCGTCAATACGACAACTTCACCAGAGGAAATGAGCCCCCAAGACGAAAAGCCAGCTGCGAATCAAGACGTGGTCGCTTATAGACTTTTGATTCCTGAATCTGGCCACCCAGATCAATATGCcgattcaaaaaattttacatcaGAAACGGGAGAGCCATTTCAAGCTCAGACCAATTACACTAACCAAGAAACGGGATTTACGGCGACAGTACAAATTGATCAAGGGGGTAGTATAGTACCAGTTACTATCGAAAGTTCTATTGAGGCATCTGCAGATTACGCAAACTTAGAGACGGCCCACTATAATAACGGACAATTTCCAGCCGATGGGTCTCAATATCTACAACATCACCAGTACAGCACCATGCAGTATCTCGATAGGAATAGTACTGATAGTCCGCCCAGTGGAAATAATATGTTATTCAGACATAGCGACCCAACATTGGGTTCCTCCAGATACCAGAACTACGACATAAGCAGCAGCCAGCAGCTCAATCAAATTACGCTGACCGCTCCGCAAACAGGCGAAACTTACCAATTCACGACAGCACCCAGCGGCAGCTGGTCCACTTCGGGTCAGGCTTACCAAGCTTACCAAGCGAACTTAAATGTGGTCCATCAAGCTGACAGCAGCACACAACAGTTTTTCAGCGGCAATTGGCAAGCAAACGGCGCCTTAGACGAGGGTCCCAACGTTTCGCCGTCCCAGAGACAACCTTCAGAGGTACTTGTCAAAGAGTGCGTTAATTGCGGCGCAAGTGTCACACCACTATGGCGCAGAGACGGCACGGGGCATTACCTATGCAACGCGTGCGGTCtctataacaaaattaatggTGTGAACCGGCCCCCGGTTAGGCCATCCAAAAAGCCACAGGCGACTGGGAACAGAAGAAATGGTGTTATATGTGCCAACTGTAAAACGAACAACACCACGCTATGGAGGCGAAATAATCAGGGGGAACCCGTGTGTAACGCATGCGGACTGTATTTCAAATTGCACGGTGTAAATCGACCAATCAGTATGAAGAAAGACGGCATTCAGACGCGAAAGCGGAGACCAAAGAGTTCGGCATCTCACGCTGGACCGTCAGCATCCGGGATGCACCAACAGCGAATTaATCCCTCACAAGTATACTATTCTCAGGCAGTTCAAGAACTTGAATTACCTGTAGATCAGTATCAATTACCCCAATCGATATCGTCAACTGTATATCCGGGTCATCAATCGTTTCATCGCCAACTCCCCAGCACAGACCACATAGGTCGTCAAATGACCAATGCTCAGCCCTTGCAGCCGATAATGACAGTAGAAGACGAACAAACGAGCGTTATTACCTCAACGTCTCAGCAAACGAGATATTCTCAGCGAGATGAGGATGACCAAGATTCCATGAGTCAATAG
- Protein Sequence
- MANKDEALSPQKEVTLKQEEDGKVPKIESGQSSPEQKQNQQSVSAPPTVIRRNILTSAGTIEAAEDQLEVTNEVVVNTTTSPEEMSPQDEKPAANQDVVAYRLLIPESGHPDQYADSKNFTSETGEPFQAQTNYTNQETGFTATVQIDQGGSIVPVTIESSIEASADYANLETAHYNNGQFPADGSQYLQHHQYSTMQYLDRNSTDSPPSGNNMLFRHSDPTLGSSRYQNYDISSSQQLNQITLTAPQTGETYQFTTAPSGSWSTSGQAYQAYQANLNVVHQADSSTQQFFSGNWQANGALDEGPNVSPSQRQPSEVLVKECVNCGASVTPLWRRDGTGHYLCNACGLYNKINGVNRPPVRPSKKPQATGNRRNGVICANCKTNNTTLWRRNNQGEPVCNACGLYFKLHGVNRPISMKKDGIQTRKRRPKSSASHAGPSASGMHQQRINPSQVYYSQAVQELELPVDQYQLPQSISSTVYPGHQSFHRQLPSTDHIGRQMTNAQPLQPIMTVEDEQTSVITSTSQQTRYSQRDEDDQDSMSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -