Cfor018753.1
Basic Information
- Insect
- Cylas formicarius
- Gene Symbol
- -
- Assembly
- GCA_029955315.1
- Location
- JARGXY010000010.1:7590738-7593443[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 4.5e-05 0.12 12.8 1.7 13 44 11 39 3 39 0.86 2 10 0.1 2.7e+02 2.0 0.2 8 38 91 116 89 120 0.68 3 10 8.5e-06 0.022 15.1 0.1 14 42 132 157 125 158 0.89 4 10 0.001 2.7 8.5 0.6 12 42 166 193 162 193 0.87 5 10 0.00084 2.2 8.7 0.1 18 41 209 230 201 233 0.85 6 10 0.03 78 3.8 0.4 17 42 246 268 240 268 0.86 7 10 0.015 39 4.7 0.1 17 41 283 304 276 308 0.79 8 10 0.66 1.7e+03 -0.5 0.0 18 24 319 325 318 331 0.84 9 10 0.22 5.7e+02 1.0 1.2 19 43 374 395 369 396 0.83 10 10 0.68 1.7e+03 -0.6 0.8 18 43 402 424 401 425 0.75
Sequence Information
- Coding Sequence
- ATGCAGCGTCACGTGAGGATCGAATGCGGCAAAGAAAGGAGCCTGGTGTGTCTGGTATGCGGAAAGGCTTTCTACTACAAGCAAGAACTCAAGATGCACTTGCGTTCGAAGCATCCCGACACGTTCCGGGATGTAATTCCCGGCCAGACCGTGCAAAAAGAGCCGAAAACGTGCTTAAACAAGCTCGGCGTTAACTTCCGTTTCGAACCGGGCGACGACATCGAGATGGACGTGGCAGAACTCGCCGATCTGGCGGACATGTCCAATTTTCTGTCGGTGCCGGACGACAGTATCTCGTGCGACATTTGTGGTACCCTCTTCCGGCATATTTCTTCGCTCAGATACCATAGGAAGCACAAGGTGTGCCTGAAACCCAAAAGGGAGGAGCTGGAACCCAAAGTGCTGCAGTGTCACATCTGCGAGAAGATATTCAACACCATTTCCGGATTAAACTACCACATGAGAAGGAAGGTTTGCGAACAGCAAGACGAAGAGAAAGAGGAGGAAATCATCCAGTGCGAAATGTGCAACACCGTTTTTAAGCACATGACATCGTTGAGGTACCACTTGACCCACAAAGTGTGTCTTAAACCTAAAAAGGAGGAGATGGAACCCAAGCCTCTTCAGTGCGAGAGCTGCGAGAAAATATTCTCCACCACCACCGCCTTGAACTATCACCTAAAAAATAGAGTGTGCGAACCCAAAGAACCCAAGGAACCAAAAGAACCCGCAGAGATCCTCTGTAAATTGTGCGGCACCTTATTCAAACACCTGACGTCGTTAAGGTACCATCTCAAGCACAAGGTCTGCCTAAAACCAAAGAAAGAAGAGATCGAGCCGAAGCTGCTTCAGTGCGAGGTGTGTCAGAAAGTATTCACGAGCAATTCATCGCTAGAGTATCACGTAAAGAGGAGAGTCTGCGAGCAACAGAGAGTCATACTGAGCCCCCCCTTTACTTGCGATTATTGTGGCACCTCGTTCGAGTTAAGGCAGACCTGGTACGCTCACATCAAGCGACAGGTGTGCAAAAAGTACCCAGAAAGGTACATCCAAAAGACTTTGGAGAGTACCGTCAAGATCGAGGTCGAGGAGCCATTCGCCTGGCAGCGTTTTTACCCTTGCCTGCAGTGCTCGAAACTCTACCGGTACAAGCAATCCCTGCAGCGCCATTTGCGCTACGAGTGCAACAAAATCCCCGGCTTCAAGTGTCCGTATTGCGAGTACGCCTGCAAACAGAAGTACACTCTTATAGGTCATGTCAGGGTGAACCACGTCGAGAGTTTTCGCGACTTCGTCTGCTACGTGTACCGGACCCTGTCGACTTAG
- Protein Sequence
- MQRHVRIECGKERSLVCLVCGKAFYYKQELKMHLRSKHPDTFRDVIPGQTVQKEPKTCLNKLGVNFRFEPGDDIEMDVAELADLADMSNFLSVPDDSISCDICGTLFRHISSLRYHRKHKVCLKPKREELEPKVLQCHICEKIFNTISGLNYHMRRKVCEQQDEEKEEEIIQCEMCNTVFKHMTSLRYHLTHKVCLKPKKEEMEPKPLQCESCEKIFSTTTALNYHLKNRVCEPKEPKEPKEPAEILCKLCGTLFKHLTSLRYHLKHKVCLKPKKEEIEPKLLQCEVCQKVFTSNSSLEYHVKRRVCEQQRVILSPPFTCDYCGTSFELRQTWYAHIKRQVCKKYPERYIQKTLESTVKIEVEEPFAWQRFYPCLQCSKLYRYKQSLQRHLRYECNKIPGFKCPYCEYACKQKYTLIGHVRVNHVESFRDFVCYVYRTLST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00413767;
- 90% Identity
- iTF_00413767;
- 80% Identity
- iTF_00413767;