Cfor017936.1
Basic Information
- Insect
- Cylas formicarius
- Gene Symbol
- SNAPC4
- Assembly
- GCA_029955315.1
- Location
- JARGXY010000010.1:298252-304536[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.25 2.7e+02 2.1 0.2 34 45 258 269 244 270 0.80 2 5 3.9e-08 4.3e-05 23.9 0.2 1 35 276 312 276 313 0.94 3 5 1.2e-12 1.3e-09 38.3 0.0 2 46 328 376 327 376 0.98 4 5 1.1e-08 1.3e-05 25.6 0.0 1 46 384 429 384 429 0.97 5 5 2.5e-14 2.7e-11 43.7 0.0 1 41 435 475 435 479 0.96
Sequence Information
- Coding Sequence
- ATGTTTAAAGGGGAGATAGAGGACATTGAAAAATTGGACGCCGCTATCCGACAACACGAATCGGACTCGTTCATCAACTACGAAGAGGTCAGCGACAACGATGAGGACGATCAGGATTTCGATACGTGTGCGGACATTTCCGCCCTGAAGGATTACGTGCCGTCCGCTTTGCTGACCGACGACGAAAAGCAGCTGATCGACTCGTGTCGAGACCCAGATCTGAAGTTATTGTTGGAGCTAAACCGAAGCAAGAACGTAAAATTGATGCAGCTGTACACAAAAATAAGACATCTGCTGATGGAGTGCCAAAGCAACATCGTCGCGAAATCGCGGCAGATCGATTCGTGTTCCGATCAATTCAAACGCGTGATCAACAGGATCTGGAGGTTCGGTTATCCTTATTTTAAGAGCACGGACAATTATCCATGCCCGATGAACGAGTACGTCGCCCGAAAAGAGGAGAACCGCGAGCTCCCGTTTTACGACATGGTGCCCACCAATAAGTGGAATCGCAGAGACATTAACCGACTGAAGAGGGGAGTCACGTTTTGCTTCAAAGCCGGCAGAGACATGGaaaccaagaaaaaaatcacCCAGTTGGAAGAGGATATTTTAGGGGAGCGCCGCACCGATAAAATAGCAGAATTGAAGGGGCTGGTGGCTAAACTGAACGAAACGATCAATTCTGATGACCAGGAATTGCCTACGGAATCCTCAGATAGATTGATGGATTGGGCGAGATTGTCGGCCACGTTCCTGCGAAGCAAGTACTCGTCGCAGGAATGTCGTTCGTTTTGGTACCTGTACCAAGACCCCCGCATAAACAAAACGCCCTGGTCCCTCGACGAGCGAAAGAAACTGGACAAGTTGGTCCGGAAATACAAACACCAGAACTGGGAGCGGATCGCGAGTGATCTCGGCACTTCACGTTCCGCGCTAATCACGTGCACCCATTACTTTACGGGCAATACCTTGCGCCCGGGCAAGTTCACGCCCGAAGAGGACGCCTTCCTGGTAGAGATGGTCGAGAACCACTCGGTGGGCGATTACGTTCCCTGGGCGAAAATAGCGCACTTTTTTAAGAATCACACCCGCAAGCAGATATTCTACCGGTGGCGGTACTACTTAAACGGACGTGGGAAAATCACGAAGGGACCGTTCACGGACGCCGAGGACGTCCTCCTGATGGTACTGGTCGATCGGTTCGGCACCAGCTTCGCCAAATGTCAGAAGTACTTTCCGACCCGATCCATGTCCCAGCTGAAGGCCAGGTACACCACCAATCTCAAGGTTAATTGGAAAAAGGGCTCCTTCACCGTCGAGGAAGACGAGAAGCTGCTCGCGTACGTCGCGAAGCACGGTTCCGGCCGCTGGGCGGCGCTGTCGTCGGAAATGAACCGATCGCCCAATCAGCTACGTCACAGGCATCGACTGATGGTTCAGTACCTCGAGGACAATCCGGGGGCGGCGATAAGGGACGCTCCTCGCAAAATCGAGCGTTCCCGCGGCAACAACTACCCGTTTTTGCGATGGGTGGCCGACCGGTATCGGGACGCCGACGTCCCGACGCTCGCCGAAATCCGCGCGACGATCGGGGCTACGGATCGGGACTCCAAGGAGGAGGCGACTCCGTCGGAAATTGGTCACGGGGACGTCGACAAGATGATTGTCGAGTTTTTCCACGGTTCGGAGGCGGCGAGCGCCGCCCAAGCGCTCGACGCGTCGCGAGCCGTCGGTCGCGTCCTGACACTGCTCGGCGCGCGTCTCGACGTACCCGCGGACTTCGCTTCAGACGGCCGTCTCGACGCCACCGACGTCGCCTTGCTACGGCCCCTGTGCGACGCCCTGCGTCCGGTAGACGGGAGGCAGGTGATTCGCGCGGACGGCCACCTCGCCTTCCGCTCGCTGATGCCGCCGACGGCGGCGTCATTGATCGGTTATCGCGCTCTCGCGGGCGTCGCGTCGTCCCCGCAAGCGACGTGGTGCGTCGAGGCGCATCTCGGCCGCCTCCCGGACGCAACCAGAGCGGTTTTAGTGGCGGAACGCGACCTGTTTTACCGACGGTTCCGGTGGACGTTCAAGCTGACCGCGGTGGCCGCCGTAGCCCCGCCTTCGAGCTCGCTTGTCGCGCTGTCAAGGACGTTCTCGGGCGGCCAGGTCGGCCAGGTGAAGAGGACGTACGCGAGAAAGCGTCGGGACGCGTCGGGGGCGGACGCAAAACGTCAAAAGATAGAACGGAACGACGGGCGGCACCTCGCAGACGAACTGAAACGAAAGATACGCGACGAGATCGTCGACTTCGGGAAAATGGTGGCGGCGTCGGGTGACGATCTCGACCGCGACGCCGAAGACCTCGCGGCGTTGGAGGCGGCGCTGAGGTCCGACGGCGGTCTAGAAGCTTTATag
- Protein Sequence
- MFKGEIEDIEKLDAAIRQHESDSFINYEEVSDNDEDDQDFDTCADISALKDYVPSALLTDDEKQLIDSCRDPDLKLLLELNRSKNVKLMQLYTKIRHLLMECQSNIVAKSRQIDSCSDQFKRVINRIWRFGYPYFKSTDNYPCPMNEYVARKEENRELPFYDMVPTNKWNRRDINRLKRGVTFCFKAGRDMETKKKITQLEEDILGERRTDKIAELKGLVAKLNETINSDDQELPTESSDRLMDWARLSATFLRSKYSSQECRSFWYLYQDPRINKTPWSLDERKKLDKLVRKYKHQNWERIASDLGTSRSALITCTHYFTGNTLRPGKFTPEEDAFLVEMVENHSVGDYVPWAKIAHFFKNHTRKQIFYRWRYYLNGRGKITKGPFTDAEDVLLMVLVDRFGTSFAKCQKYFPTRSMSQLKARYTTNLKVNWKKGSFTVEEDEKLLAYVAKHGSGRWAALSSEMNRSPNQLRHRHRLMVQYLEDNPGAAIRDAPRKIERSRGNNYPFLRWVADRYRDADVPTLAEIRATIGATDRDSKEEATPSEIGHGDVDKMIVEFFHGSEAASAAQALDASRAVGRVLTLLGARLDVPADFASDGRLDATDVALLRPLCDALRPVDGRQVIRADGHLAFRSLMPPTAASLIGYRALAGVASSPQATWCVEAHLGRLPDATRAVLVAERDLFYRRFRWTFKLTAVAAVAPPSSSLVALSRTFSGGQVGQVKRTYARKRRDASGADAKRQKIERNDGRHLADELKRKIRDEIVDFGKMVAASGDDLDRDAEDLAALEAALRSDGGLEAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -